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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-196a

732 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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ENSGACT00000013727 NOT ANNOTATED
16.8831 -17 1e-06 500 11 1 3 [+] picture button
NP_068761.4 ENSGACT00000025448 CDNA: FLJ23339 fis, clone HEP13401. [Source:Uniprot/SPTREMBL;Acc:Q9H5K9]
16.9418 -19.13 3.06606e-06 272 8 1 10 [+] picture button
TRPA1 ENSGACT00000003674 Transient receptor potential cation channel subfamily A member 1 (Ankyrin-like with transmembrane domains protein 1) (Transformation sensitive-protein p120). [Source:Uniprot/SWISSPROT;Acc:O75762]
16.3342 -20.79 3.79937e-06 500 6 2 7 [+] picture button
YEATS4 ENSGACT00000026066 YEATS domain-containing protein 4 (Glioma-amplified sequence-41) (Gas41) (NuMA-binding protein 1) (NuBI-1) (NuBI1). [Source:Uniprot/SWISSPROT;Acc:O95619]
16.8042 -15.27 5.91832e-06 500 8 2 13 [+] picture button
GNPNAT1 ENSGACT00000021625 Glucosamine 6-phosphate N-acetyltransferase (EC 2.3.1.4) (Phosphoglucosamine transacetylase) (Phosphoglucosamine acetylase). [Source:Uniprot/SWISSPROT;Acc:Q96EK6]
16.2596 -10.38 7.77778e-06 281 4 2 5 [+] picture button
NP_078836.1 ENSGACT00000026480 CDNA: FLJ21963 fis, clone HEP05583 (FLJ21963 protein). [Source:Uniprot/SPTREMBL;Acc:Q9H6R3]
17.7377 -15.61 9.94418e-06 231 3 1 4 [+] picture button
VSNL1 (1 of 2) ENSGACT00000006351 Visinin-like protein 1 (VILIP) (Hippocalcin-like protein 3) (HLP3). [Source:Uniprot/SWISSPROT;Acc:P62760]
15.9238 -11.93 1.21726e-05 500 3 9 5 [+] picture button
COL1A2 ENSGACT00000008691 Collagen alpha-2(I) chain precursor. [Source:Uniprot/SWISSPROT;Acc:P08123]
17.2829 -14.81 1.24962e-05 253 4 7 10 [+] picture button
TNNC1 ENSGACT00000020021 Troponin C, slow skeletal and cardiac muscles (TN-C). [Source:Uniprot/SWISSPROT;Acc:P63316]
17.2537 -17.63 1.4058e-05 513 4 3 7 [+] picture button
POLR3D ENSGACT00000014750 DNA-directed RNA polymerase III subunit D (EC 2.7.7.6) (DNA-directed RNA polymerase III 47 kDa polypeptide) (RNA polymerase C subunit 4) (RPC4) (RPC53) (Protein BN51). [Source:Uniprot/SWISSPROT;Acc:P05423]
16.3623 -18.39 1.70184e-05 341 5 2 9 [+] picture button
CLEC3A ENSGACT00000020805 C-type lectin domain family 3 member A precursor (C-type lectin superfamily member 1) (Cartilage-derived C-type lectin). [Source:Uniprot/SWISSPROT;Acc:O75596]
18.0535 -21.05 1.73394e-05 500 5 1 6 [+] picture button
ZFPM1 ENSGACT00000003357 Zinc finger protein ZFPM1 (Zinc finger protein multitype 1) (Friend of GATA protein 1) (Friend of GATA-1) (FOG-1). [Source:Uniprot/SWISSPROT;Acc:Q8IX07]
17.1236 -21.77 2.69095e-05 500 7 3 8 [+] picture button
HOXA5 ENSGACT00000009434 Homeobox protein Hox-A5 (Hox-1C). [Source:Uniprot/SWISSPROT;Acc:P20719]
16.2197 -17.98 3.43481e-05 500 5 6 7 [+] picture button
FAM19A2 ENSGACT00000025331 Protein FAM19A2 precursor (Chemokine-like protein TAFA-2). [Source:Uniprot/SWISSPROT;Acc:Q8N3H0]
16.9789 -17.69 3.47025e-05 500 4 3 9 [+] picture button
KIAA2022 ENSGACT00000024163 Uncharacterized protein KIAA2022. [Source:Uniprot/SWISSPROT;Acc:Q5QGS0]
17.6237 -16.66 4.33356e-05 500 6 7 9 [+] picture button
C9orf75 ENSGACT00000023905 CDNA FLJ90254 fis, clone NT2RM4000295. [Source:Uniprot/SPTREMBL;Acc:Q8NCH2]
16.1757 -22.46 6.09487e-05 500 4 1 6 [+] picture button
FRMD3 ENSGACT00000010017 FERM domain containing 3 [Source:RefSeq_peptide;Acc:NP_777598]
17.7053 -22 6.23237e-05 500 3 1 5 [+] picture button
ZXDA ENSGACT00000015004 Zinc finger X-linked protein ZXDA. [Source:Uniprot/SWISSPROT;Acc:P98168]
16.0169 -15.4 6.57413e-05 460 6 1 10 [+] picture button
PLLP ENSGACT00000018406 Plasmolipin (Plasma membrane proteolipid). [Source:Uniprot/SWISSPROT;Acc:Q9Y342]
16.5491 -13.94 7.25773e-05 500 4 1 5 [+] picture button
C12orf45 ENSGACT00000025604 Uncharacterized protein C12orf45. [Source:Uniprot/SWISSPROT;Acc:Q8N5I9]
16.3008 -18.53 7.27253e-05 375 5 2 5 [+] picture button
BIRC6 ENSGACT00000002908 Baculoviral IAP repeat-containing protein 6 (Ubiquitin-conjugating BIR domain enzyme apollon). [Source:Uniprot/SWISSPROT;Acc:Q9NR09]
17.3635 -16.4 7.54889e-05 500 4 9 5 [+] picture button
DUSP12 ENSGACT00000019650 Dual specificity protein phosphatase 12 (EC 3.1.3.48) (EC 3.1.3.16) (Dual specificity tyrosine phosphatase YVH1). [Source:Uniprot/SWISSPROT;Acc:Q9UNI6]
16.1459 -18.4 7.62349e-05 205 6 3 10 [+] picture button
BAT4 ENSGACT00000022097 Protein BAT4 (HLA-B-associated transcript 4) (G5 protein) (G patch domain-containing protein 10). [Source:Uniprot/SWISSPROT;Acc:O95872]
15.9185 -20.12 7.91121e-05 230 4 1 7 [+] picture button
ENSGACT00000011403 SAR1a gene homolog 1 [Source:RefSeq_peptide;Acc:NP_001007740]SAR1a gene homolog 1 [Source:RefSeq_peptide;Acc:NP_001007740] BY ORTHOLOGY TO:ENSRNOT00000000673
16.0322 -18.69 9.376e-05 174 4 1 5 [+] picture button
PEX1 ENSGACT00000007715 Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome biogenesis disorder protein 1). [Source:Uniprot/SWISSPROT;Acc:O43933]
15.9185 -15.13 0.000102174 162 4 3 8 [+] picture button
LRP1 (2 of 2) ENSGACT00000012316 Low-density lipoprotein receptor-related protein 1 precursor (LRP) (Alpha-2-macroglobulin receptor) (A2MR) (Apolipoprotein E receptor) (APOER) (CD91 antigen). [Source:Uniprot/SWISSPROT;Acc:Q07954]
16.5053 -14.6 0.000104816 500 9 7 13 [+] picture button
ENSGACT00000008730 Friend leukemia integration 1 transcription factor (Fli-1 proto- oncogene) (ERGB transcription factor). [Source:Uniprot/SWISSPROT;Acc:Q01543]Friend leukemia integration 1 transcription factor (Fli-1 proto- oncogene) (ERGB transcription factor). [Source:Uniprot/SWISSPROT;Acc:Q01543] BY ORTHOLOGY TO:ENSXETT00000049289
16.7968 -19.41 0.000112042 500 7 4 7 [+] picture button
ASB3 ENSGACT00000018960 Ankyrin repeat and SOCS box protein 3 (ASB-3). [Source:Uniprot/SWISSPROT;Acc:Q9Y575]
16.4416 -22.13 0.000119901 500 2 2 3 [+] picture button
MCCC1 ENSGACT00000008134 Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) (3- methylcrotonyl-CoA carboxylase biotin-containing [Source:Uniprot/SWISSPROT;Acc:Q96RQ3]
16.3342 -19.78 0.000120737 500 6 2 9 [+] picture button
IGFBP6 (2 of 2) ENSGACT00000014167 Insulin-like growth factor-binding protein 6 precursor (IGFBP-6) (IBP- 6) (IGF-binding protein 6). [Source:Uniprot/SWISSPROT;Acc:P24592]
16.6117 -19.29 0.000133573 500 9 3 13 [+] picture button
CYB5A ENSGACT00000002659 Cytochrome b5. [Source:Uniprot/SWISSPROT;Acc:P00167]
16.0368 -22.03 0.000141625 435 5 2 7 [+] picture button
ENSGACT00000002853 SPS1/STE20-related protein kinase YSK4 (EC 2.7.11.1) (Regulated in COPD, protein kinase). [Source:Uniprot/SWISSPROT;Acc:Q56UN5]SPS1/STE20-related protein kinase YSK4 (EC 2.7.11.1) (Regulated in COPD, protein kinase). [Source:Uniprot/SWISSPROT;Acc:Q56UN5] BY ORTHOLOGY TO:ENSXETT00000001086
16.4416 -14.98 0.000143323 500 7 1 8 [+] picture button
LRRC4 (2 of 2) ENSGACT00000026209 Leucine-rich repeat-containing protein 4 precursor (Brain tumor- associated protein BAG). [Source:Uniprot/SWISSPROT;Acc:Q9HBW1]
16.8918 -18.41 0.00014941 500 8 4 8 [+] picture button
LYAR_HUMAN ENSGACT00000012127 Cell growth-regulating nucleolar protein. [Source:Uniprot/SWISSPROT;Acc:Q9NX58]
16.8715 -16.87 0.000149843 500 7 3 9 [+] picture button
ENSGACT00000001964 hypothetical protein LOC393668 [Source:RefSeq_peptide;Acc:NP_956989]hypothetical protein LOC393668 [Source:RefSeq_peptide;Acc:NP_956989] BY ORTHOLOGY TO:ENSDART00000103842
16.9418 -15.42 0.000159226 214 5 1 11 [+] picture button
STRBP ENSGACT00000023015 Spermatid perinuclear RNA-binding protein. [Source:Uniprot/SWISSPROT;Acc:Q96SI9]
16.1951 -19.74 0.000169 500 6 2 8 [+] picture button
TAGLN (1 of 2) ENSGACT00000007964 Transgelin (Smooth muscle protein 22-alpha) (SM22-alpha) (WS3-10) (22 kDa actin-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q01995]
17.5162 -21.69 0.000208799 500 5 1 8 [+] picture button
NEDD4 ENSGACT00000020950 E3 ubiquitin-protein ligase NEDD4 (EC 6.3.2.-). [Source:Uniprot/SWISSPROT;Acc:P46934]
16.0118 -13.81 0.000213545 500 6 3 6 [+] picture button
VKORC1 ENSGACT00000010358 Vitamin K epoxide reductase complex subunit 1 (EC 1.1.4.1) (Vitamin K1 2,3-epoxide reductase subunit 1). [Source:Uniprot/SWISSPROT;Acc:Q9BQB6]
17.8013 -20.1 0.000249293 500 5 1 7 [+] picture button
ZBTB47 ENSGACT00000004427 zinc finger and BTB domain containing 47 (ZBTB47), mRNA [Source:RefSeq_dna;Acc:NM_145166]
17.6622 -23.51 0.000323042 500 6 2 12 [+] picture button
ENSGACT00000015079 Protein four-jointed. [Source:Uniprot/SWISSPROT;Acc:P54360]Protein four-jointed. [Source:Uniprot/SWISSPROT;Acc:P54360] BY ORTHOLOGY TO:CG10917-RA
16.3342 -21.04 0.000333346 500 5 4 6 [+] picture button
NP_054900.1 (2 of 2) ENSGACT00000026004 galectin-related protein (HSPC159), mRNA [Source:RefSeq_dna;Acc:NM_014181]
17.6237 -17.71 0.000336055 500 1 1 3 [+] picture button
CCDC15 ENSGACT00000027490 coiled-coil domain containing 15 [Source:RefSeq_peptide;Acc:NP_079280]
17.2167 -20.32 0.000345258 500 2 2 2 [+] picture button
CLUAP1 ENSGACT00000011528 Clusterin-associated protein 1. [Source:Uniprot/SWISSPROT;Acc:Q96AJ1]
16.2596 -12.7 0.000354327 174 4 2 5 [+] picture button
ENSGACT00000025326 Homolog of Homo sapiens "SAPS287 [Source:IPI;Acc:IPI00184265]"Homolog of Homo sapiens "SAPS287 [Source:IPI;Acc:IPI00184265]" BY ORTHOLOGY TO:SINFRUT00000161345
17.0864 -15.94 0.000380841 500 4 2 7 [+] picture button
GATM ENSGACT00000019873 Glycine amidinotransferase, mitochondrial precursor (EC 2.1.4.1) (L- arginine:glycine amidinotransferase) (Transamidinase) (AT). [Source:Uniprot/SWISSPROT;Acc:P50440]
16.3342 -20.34 0.000404959 500 8 7 9 [+] picture button
A1A4W8_HUMAN ENSGACT00000025908 C4orf29 protein. [Source:Uniprot/SPTREMBL;Acc:A1A4W8]
17.2008 -15.15 0.000423653 470 5 2 8 [+] picture button
WDR44 ENSGACT00000027436 WD repeat protein 44 (Rabphilin-11). [Source:Uniprot/SWISSPROT;Acc:Q5JSH3]
17.9172 -18.35 0.000425913 500 5 3 7 [+] picture button
GPR68 ENSGACT00000002519 Sphingosylphosphorylcholine receptor (Ovarian cancer G-protein coupled receptor 1) (OGR-1) (G-protein coupled receptor 68) (GPR12A). [Source:Uniprot/SWISSPROT;Acc:Q15743]
18.0535 -21.14 0.000438781 500 9 2 10 [+] picture button
SLC35B2 ENSGACT00000017914 Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS transporter 1) (Solute carrier family 35 member B2) (Putative MAPK-activating protein PM15) (Putative NF-kappa-B-activating protein 48). [Source:Uniprot/SWISSPROT;Acc:Q8TB61]
16.2267 -15.35 0.000440084 500 4 2 6 [+] picture button

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Download table: GFF TXT
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