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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-192

836 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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PRMT2 ENSGACT00000008344 Protein arginine N-methyltransferase 2 (EC 2.1.1.-). [Source:Uniprot/SWISSPROT;Acc:P55345]
14.855 -22.9 0.000000146914 482 4 2 5 [+] picture button
ENSGACT00000022815 NOT ANNOTATED
17.4962 -14.87 0.000001 500 17 1 5 [+] picture button
NP_689894.1 ENSGACT00000022668 CDNA FLJ38482 fis, clone FEBRA2022963. [Source:Uniprot/SPTREMBL;Acc:Q8N928]
15.8778 -18.15 0.0000010979 590 3 5 4 [+] picture button
COG6 ENSGACT00000015804 Conserved oligomeric Golgi complex component 6. [Source:Uniprot/SWISSPROT;Acc:Q9Y2V7]
16.6889 -14.07 0.0000030662 269 4 2 5 [+] picture button
GALNT8 (2 of 2) ENSGACT00000018174 Probable polypeptide N-acetylgalactosaminyltransferase 8 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 8) (UDP- GalNAc:polypeptide N-acetylgalactosaminyltransferase 8) (Polypeptide GalNAc transferase 8) (GalNAc-T8) (pp-GaNTase 8). [Source:Uniprot/SWISSPROT;Acc:Q9NY28]
17.1316 -18.83 0.00000346025 429 4 1 10 [+] picture button
PMVK ENSGACT00000004046 Phosphomevalonate kinase (EC 2.7.4.2) (PMKase). [Source:Uniprot/SWISSPROT;Acc:Q15126]
15.4442 -21.35 0.00000488223 500 8 3 8 [+] picture button
SNRPD3 ENSGACT00000023208 Small nuclear ribonucleoprotein Sm D3 (snRNP core protein D3) (Sm-D3). [Source:Uniprot/SWISSPROT;Acc:P62318]
15.3362 -19.21 0.00000561284 500 6 2 8 [+] picture button
ZCD2 ENSGACT00000023734 zinc finger, CDGSH-type domain 2 [Source:RefSeq_peptide;Acc:NP_001008389]
15.5283 -15.26 0.00000883107 415 8 1 9 [+] picture button
ANGPTL7 ENSGACT00000006493 Angiopoietin-related protein 7 precursor (Angiopoietin-like 7) (Angiopoietin-like factor) (Cornea-derived transcript 6 protein). [Source:Uniprot/SWISSPROT;Acc:O43827]
15.0327 -15.16 0.00000954039 564 5 3 6 [+] picture button
TP53INP1 ENSGACT00000023490 Tumor protein p53-inducible nuclear protein 1 (p53-dependent damage- inducible nuclear protein 1) (p53DINP1) (Stress-induced protein). [Source:Uniprot/SWISSPROT;Acc:Q96A56]
16.9562 -15.33 0.0000113335 500 4 2 7 [+] picture button
NUP188 ENSGACT00000021224 nucleoporin 188kDa [Source:RefSeq_peptide;Acc:NP_056169]
17.2234 -18.11 0.0000209445 467 6 4 8 [+] picture button
PGM3 ENSGACT00000017635 Phosphoacetylglucosamine mutase (EC 5.4.2.3) (PAGM) (Acetylglucosamine phosphomutase) (N-acetylglucosamine-phosphate mutase) (Phosphoglucomutase 3). [Source:Uniprot/SWISSPROT;Acc:O95394]
15.8972 -19.57 0.0000260476 526 6 2 10 [+] picture button
FLNB ENSGACT00000004976 Filamin-B (FLN-B) (Beta-filamin) (Actin-binding-like protein) (Thyroid autoantigen) (Truncated actin-binding protein) (Truncated ABP) (ABP- 280 homolog) (ABP-278) (Filamin 3) (Filamin homolog 1) (Fh1). [Source:Uniprot/SWISSPROT;Acc:O75369]
17.697 -23.1 0.0000322346 504 5 1 6 [+] picture button
CBS ENSGACT00000019352 Cystathionine beta-synthase (EC 4.2.1.22) (Serine sulfhydrase) (Beta- thionase). [Source:Uniprot/SWISSPROT;Acc:P35520]
15.0122 -9.54 0.0000437158 500 11 1 16 [+] picture button
CLTB ENSGACT00000024306 Clathrin light chain B (Lcb). [Source:Uniprot/SWISSPROT;Acc:P09497]
15.7298 -16.6 0.0000452554 545 6 3 8 [+] picture button
C10orf83 ENSGACT00000009950 MORN repeat-containing protein C10orf83 (Protein 44050). [Source:Uniprot/SWISSPROT;Acc:Q8NDC4]
16.0557 -15.23 0.0000519498 374 8 4 13 [+] picture button
SKIL ENSGACT00000022459 Ski-like protein (Ski-related protein) (Ski-related oncogene). [Source:Uniprot/SWISSPROT;Acc:P12757]
15.0433 -11.26 0.0000537891 500 5 1 6 [+] picture button
NOP5_HUMAN ENSGACT00000018229 Nucleolar protein NOP5 (Nucleolar protein 5) (NOP58). [Source:Uniprot/SWISSPROT;Acc:Q9Y2X3]
15.619 -15.76 0.0000558902 315 7 2 11 [+] picture button
HCCS ENSGACT00000001241 Cytochrome c-type heme lyase (EC 4.4.1.17) (CCHL) (Holocytochrome c- type synthase). [Source:Uniprot/SWISSPROT;Acc:P53701]
15.9053 -23.09 0.0000600229 377 4 1 5 [+] picture button
NTS ENSGACT00000012617 Neurotensin/neuromedin N precursor [Contains: Large neuromedin N (NmN- 125); Neuromedin N (NmN) (NN); Neurotensin (NT); Tail peptide]. [Source:Uniprot/SWISSPROT;Acc:P30990]
16.2321 -20.22 0.0000661023 500 5 2 8 [+] picture button
TMEM5 ENSGACT00000017673 Transmembrane protein 5. [Source:Uniprot/SWISSPROT;Acc:Q9Y2B1]
16.2002 -15.65 0.0000755681 500 11 2 14 [+] picture button
WDR81 ENSGACT00000014417 WD repeat protein 81. [Source:Uniprot/SWISSPROT;Acc:Q562E7]
15.9319 -10.36 0.0000801507 414 5 3 7 [+] picture button
TCHP ENSGACT00000012058 trichoplein [Source:RefSeq_peptide;Acc:NP_115676]
15.9692 -16.77 0.0000801958 418 5 1 7 [+] picture button
TAPT1 (2 of 2) ENSGACT00000022542 transmembrane anterior posterior transformation 1 [Source:RefSeq_peptide;Acc:NP_699196]
15.2956 -17.38 0.0000859793 500 6 3 7 [+] picture button
SLC25A29 (2 of 2) ENSGACT00000012477 Mitochondrial carnitine/acylcarnitine carrier protein CACL (CACT-like) (Solute carrier family 25 member 29). [Source:Uniprot/SWISSPROT;Acc:Q8N8R3]
17.6042 -18.67 0.0000997706 500 5 2 6 [+] picture button
SLC31A1 ENSGACT00000020453 High-affinity copper uptake protein 1 (hCTR1) (Copper transporter 1) (Solute carrier family 31 member 1). [Source:Uniprot/SWISSPROT;Acc:O15431]
16.2317 -15.72 0.000105023 188 3 1 3 [+] picture button
RIMS3 ENSGACT00000009589 Regulating synaptic membrane exocytosis protein 3 (Nim3) (Rab-3- interacting molecule 3) (RIM 3) (RIM3 gamma). [Source:Uniprot/SWISSPROT;Acc:Q9UJD0]
17.1722 -20.37 0.000115058 500 5 5 11 [+] picture button
NME7 ENSGACT00000018102 Nucleoside diphosphate kinase 7 (EC 2.7.4.6) (NDK 7) (NDP kinase 7) (nm23-H7). [Source:Uniprot/SWISSPROT;Acc:Q9Y5B8]
15.1769 -16.55 0.000116948 500 6 2 12 [+] picture button
KIAA0802 ENSGACT00000022012 Uncharacterized protein KIAA0802. [Source:Uniprot/SWISSPROT;Acc:Q9Y4B5]
17.5977 -17.74 0.000137742 500 6 2 9 [+] picture button
PPM1D (1 of 2) ENSGACT00000017951 Protein phosphatase 2C isoform delta (EC 3.1.3.16) (PP2C-delta) (p53- induced protein phosphatase 1) (Protein phosphatase magnesium- dependent 1 delta). [Source:Uniprot/SWISSPROT;Acc:O15297]
15.5522 -13.43 0.000152752 500 3 2 5 [+] picture button
CNGA2 ENSGACT00000026936 Cyclic nucleotide-gated olfactory channel (Cyclic nucleotide-gated cation channel 2) (CNG channel 2) (CNG-2) (CNG2). [Source:Uniprot/SWISSPROT;Acc:Q16280]
17.1722 -17.44 0.000154846 500 4 1 5 [+] picture button
AP3B2 ENSGACT00000009656 AP-3 complex subunit beta-2 (Adapter-related protein complex 3 beta-2 subunit) (Beta3B-adaptin) (Adaptor protein complex AP-3 beta-2 subunit) (AP-3 complex beta-2 subunit) (Clathrin assembly protein complex 3 beta-2 large chain) (Neuron-specific vesicle c [Source:Uniprot/SWISSPROT;Acc:Q13367]
16.9562 -15.03 0.000180605 500 8 1 10 [+] picture button
NOV ENSGACT00000009180 Protein NOV homolog precursor (NovH) (Nephroblastoma overexpressed gene protein homolog). [Source:Uniprot/SWISSPROT;Acc:P48745]
16.4162 -15.47 0.000186942 500 6 1 10 [+] picture button
TICAM2 ENSGACT00000009951 Transmembrane emp24 domain-containing protein 7 precursor. [Source:Uniprot/SWISSPROT;Acc:Q9Y3B3]
15.8762 -15.08 0.000229004 500 2 1 3 [+] picture button
USHBP1 ENSGACT00000010325 USH1C-binding protein 1 (Usher syndrome type-1C protein-binding protein 1) (MCC-2) (AIE-75-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q8N6Y0]
16.5242 -10.36 0.000269251 500 6 2 11 [+] picture button
DHR11_HUMAN ENSGACT00000026806 Dehydrogenase/reductase SDR family member 11 precursor (EC 1.-.-.-). [Source:Uniprot/SWISSPROT;Acc:Q6UWP2]
17.3882 -16.26 0.000270451 500 6 2 8 [+] picture button
DMAP1 ENSGACT00000013577 DNA methyltransferase 1-associated protein 1 (DNMT1-associated protein 1) (DNMAP1). [Source:Uniprot/SWISSPROT;Acc:Q9NPF5]
15.6605 -10.41 0.000274577 500 7 1 10 [+] picture button
KIAA0082 ENSGACT00000015090 KIAA0082 (KIAA0082), mRNA [Source:RefSeq_dna;Acc:NM_015050]
18.1759 -19.31 0.000280051 500 5 2 7 [+] picture button
GATAD2A (2 of 2) ENSGACT00000020085 Transcriptional repressor p66 alpha (Hp66alpha) (GATA zinc finger domain-containing protein 2A). [Source:Uniprot/SWISSPROT;Acc:Q86YP4]
17.4811 -26.48 0.000284668 500 5 2 10 [+] picture button
GPATCH3 ENSGACT00000009582 G patch domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q96I76]
15.7778 -12.1 0.000316848 500 5 2 6 [+] picture button
RNF121 ENSGACT00000026993 RING finger protein 121. [Source:Uniprot/SWISSPROT;Acc:Q9H920]
16.3082 -14.92 0.000349327 500 7 2 10 [+] picture button
MAP3K14 (2 of 2) ENSGACT00000005735 Mitogen-activated protein kinase kinase kinase 14 (EC 2.7.11.25) (NF- kappa beta-inducing kinase) (Serine/threonine-protein kinase NIK) (HsNIK). [Source:Uniprot/SWISSPROT;Acc:Q99558]
18.0606 -18.64 0.000356248 195 4 2 9 [+] picture button
FAM54B ENSGACT00000012224 family with sequence similarity 54, member B (FAM54B), mRNA [Source:RefSeq_dna;Acc:NM_019557]
15.2282 -12.4 0.000358219 500 6 3 8 [+] picture button
CCDC85A (1 of 2) ENSGACT00000017814 Coiled-coil domain-containing protein 85A. [Source:Uniprot/SWISSPROT;Acc:Q96PX6]
16.4162 -12.52 0.000361187 500 6 1 6 [+] picture button
TOE1 ENSGACT00000018963 Target of EGR1 protein 1. [Source:Uniprot/SWISSPROT;Acc:Q96GM8]
15.4442 -15.46 0.000372209 500 6 1 6 [+] picture button
ARF6 (2 of 2) ENSGACT00000010582 ADP-ribosylation factor 6. [Source:Uniprot/SWISSPROT;Acc:P62330]
17.4534 -16.17 0.000373378 500 2 3 6 [+] picture button
DDX43 ENSGACT00000016016 Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box protein HAGE) (Helical antigen). [Source:Uniprot/SWISSPROT;Acc:Q9NXZ2]
18.4683 -18.14 0.000374071 500 5 1 7 [+] picture button
ENSGACT00000026705 cone-rod homeobox [Source:RefSeq_peptide;Acc:NP_694419]cone-rod homeobox [Source:RefSeq_peptide;Acc:NP_694419] BY ORTHOLOGY TO:ENSDART00000037879
16.6649 -15.93 0.000381538 500 5 2 9 [+] picture button
RASGEF1C ENSGACT00000023935 RasGEF domain family, member 1C [Source:RefSeq_peptide;Acc:NP_778232]
16.5242 -23.34 0.000381621 500 4 1 5 [+] picture button
ENSGACT00000024361 RIKEN cDNA 2610034M16 gene [Source:MarkerSymbol;Acc:MGI:1916489]RIKEN cDNA 2610034M16 gene [Source:MarkerSymbol;Acc:MGI:1916489] BY ORTHOLOGY TO:ENSMUST00000025064
15.1202 -17 0.000410733 500 7 1 13 [+] picture button

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Download table: GFF TXT
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