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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-189

809 hits found.


Page 1 of 17
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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SFXN3 ENSGACT00000010644 Sideroflexin-3. [Source:Uniprot/SWISSPROT;Acc:Q9BWM7]
15.6437 -23.38 1.43017e-07 500 8 2 12 [+] picture button
PFKP (1 of 2) ENSGACT00000002340 6-phosphofructokinase type C (EC 2.7.1.11) (Phosphofructokinase 1) (Phosphohexokinase) (Phosphofructo-1-kinase isozyme C) (PFK-C) (6- phosphofructokinase, platelet type). [Source:Uniprot/SWISSPROT;Acc:Q01813]
18.9062 -25.51 1e-06 542 6 1 6 [+] picture button
ENSGACT00000014594 NOT ANNOTATED
16.6843 -21.59 1e-06 500 7 1 5 [+] picture button
DMTF1 ENSGACT00000001735 cyclin D binding myb-like transcription factor 1 [Source:RefSeq_peptide;Acc:NP_066968]
16.235 -21.52 1e-06 476 6 1 3 [+] picture button
PFKP (1 of 2) ENSGACT00000002337 6-phosphofructokinase type C (EC 2.7.1.11) (Phosphofructokinase 1) (Phosphohexokinase) (Phosphofructo-1-kinase isozyme C) (PFK-C) (6- phosphofructokinase, platelet type). [Source:Uniprot/SWISSPROT;Acc:Q01813]
18.8093 -25.51 1e-06 567 7 3 11 [+] picture button
DNM3 ENSGACT00000021553 Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular) (T-dynamin). [Source:Uniprot/SWISSPROT;Acc:Q9UQ16]
14.8264 -15.4 4.68698e-06 500 6 1 9 [+] picture button
ENSGACT00000002898 Twist-related protein 2. [Source:Uniprot/SWISSPROT;Acc:P97831]Twist-related protein 2. [Source:Uniprot/SWISSPROT;Acc:P97831] BY ORTHOLOGY TO:ENSRNOT00000027597
15.4645 -23.06 6.74012e-06 500 6 5 8 [+] picture button
ANKRD40 ENSGACT00000016679 Ankyrin repeat domain-containing protein 40. [Source:Uniprot/SWISSPROT;Acc:Q6AI12]
15.7489 -18.76 1.16677e-05 500 6 4 7 [+] picture button
EEF1E1 ENSGACT00000003035 Eukaryotic translation elongation factor 1 epsilon-1 (Multisynthetase complex auxiliary component p18) (Elongation factor p18). [Source:Uniprot/SWISSPROT;Acc:O43324]
16.113 -22.58 1.78631e-05 500 9 1 17 [+] picture button
Q6V4H8_GASAC ENSGACT00000007512 Sox9a transcription factor. [Source:Uniprot/SPTREMBL;Acc:Q6V4H8]
18.1582 -24.61 2.13629e-05 500 5 3 6 [+] picture button
NP_775813.1 ENSGACT00000012555 lamina ancestor CG10645-PB, isoform B [Source:RefSeq_peptide;Acc:NP_523933]lamina ancestor CG10645-PB, isoform B [Source:RefSeq_peptide;Acc:NP_523933] BY ORTHOLOGY TO:CG10645-RC
15.8827 -16.58 2.41599e-05 401 5 2 7 [+] picture button
CACHD1 ENSGACT00000009446 cache domain containing 1 [Source:RefSeq_peptide;Acc:NP_065976]
17.6895 -19.26 2.43295e-05 500 5 1 5 [+] picture button
ENSGACT00000009190 Homolog of Homo sapiens "Putative RNA-binding protein 16 [Source:IPI;Acc:IPI00298884]"Homolog of Homo sapiens "Putative RNA-binding protein 16 [Source:IPI;Acc:IPI00298884]" BY ORTHOLOGY TO:SINFRUT00000139630
15.6255 -18.47 3.03906e-05 500 4 8 7 [+] picture button
CNOT1 ENSGACT00000003442 CCR4-NOT transcription complex, subunit 1 isoform a [Source:RefSeq_peptide;Acc:NP_057368]
16.2565 -18.74 3.16083e-05 500 2 1 2 [+] picture button
C1orf160 (2 of 2) ENSGACT00000009527 Uncharacterized protein C1orf160. [Source:Uniprot/SWISSPROT;Acc:Q9H0R3]
15.926 -14.5 3.16545e-05 324 10 3 16 [+] picture button
LIN7B ENSGACT00000000586 Lin-7 homolog B (Lin-7B) (hLin7B) (Mammalian lin-seven protein 2) (MALS-2) (Vertebrate lin-7 homolog 2) (Veli-2 protein) (hVeli2). [Source:Uniprot/SWISSPROT;Acc:Q9HAP6]
15.8748 -18.92 3.20005e-05 429 3 1 5 [+] picture button
EFHA2 (1 of 2) ENSGACT00000024706 EF-hand domain-containing family member A2. [Source:Uniprot/SWISSPROT;Acc:Q86XE3]
16.5774 -17.21 3.46318e-05 500 9 2 11 [+] picture button
YARS2 ENSGACT00000004925 Tyrosyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.1) (Tyrosine--tRNA ligase) (TyrRS). [Source:Uniprot/SWISSPROT;Acc:Q9Y2Z4]
16.4041 -27.63 4.11058e-05 155 5 1 6 [+] picture button
CCDC103 ENSGACT00000013881 Coiled-coil domain-containing protein 103. [Source:Uniprot/SWISSPROT;Acc:Q8IW40]
14.8661 -20.44 4.15505e-05 500 5 2 6 [+] picture button
MRPL28 ENSGACT00000012758 39S ribosomal protein L28, mitochondrial precursor (L28mt) (MRP-L28) (Melanoma antigen p15) (Melanoma-associated antigen recognized by T lymphocytes). [Source:Uniprot/SWISSPROT;Acc:Q13084]
14.7071 -14.71 4.66407e-05 278 4 1 4 [+] picture button
MLH1 ENSGACT00000004811 DNA mismatch repair protein Mlh1 (MutL protein homolog 1). [Source:Uniprot/SWISSPROT;Acc:P40692]
14.9731 -15.99 5.86412e-05 500 7 1 7 [+] picture button
KL ENSGACT00000027226 Klotho precursor (EC 3.2.1.31) [Contains: Klotho peptide]. [Source:Uniprot/SWISSPROT;Acc:Q9UEF7]
16.5316 -16.44 6.56465e-05 500 8 1 9 [+] picture button
MRPL51 ENSGACT00000013486 39S ribosomal protein L51, mitochondrial precursor (L51mt) (MRP-L51) (bMRP64) (bMRP-64). [Source:Uniprot/SWISSPROT;Acc:Q4U2R6]
15.538 -17.25 7.87572e-05 500 3 1 4 [+] picture button
UHRF2 ENSGACT00000022267 E3 ubiquitin-protein ligase UHRF2 (EC 6.3.2.-) (Ubiquitin-like PHD and RING finger domain-containing protein 2) (Ubiquitin-like-containing PHD and RING finger domains protein 2) (Np95/ICBP90-like RING finger protein) (Np95-like RING finger protein) (Nucle [Source:Uniprot/SWISSPROT;Acc:Q96PU4]
15.0354 -19.21 9.41336e-05 500 5 4 4 [+] picture button
PHF21B ENSGACT00000000735 PHD finger protein 21B. [Source:Uniprot/SWISSPROT;Acc:Q96EK2]
17.8608 -23.81 0.000105774 500 2 1 2 [+] picture button
ENSGACT00000008767 F10E7.9 [Source:RefSeq_peptide;Acc:NP_495469]F10E7.9 [Source:RefSeq_peptide;Acc:NP_495469] BY ORTHOLOGY TO:F10E7.9
17.1121 -23.92 0.000106488 500 4 2 5 [+] picture button
POR ENSGACT00000010220 NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R). [Source:Uniprot/SWISSPROT;Acc:P16435]
14.9491 -23.71 0.000106596 500 7 3 8 [+] picture button
DHX36 ENSGACT00000013625 Probable ATP-dependent RNA helicase DHX36 (EC 3.6.1.-) (DEAH box protein 36) (MLE-like protein 1) (RNA helicase associated with AU-rich element ARE). [Source:Uniprot/SWISSPROT;Acc:Q9H2U1]
15.9515 -19.75 0.000106995 239 5 2 13 [+] picture button
EGR1 ENSGACT00000024011 Early growth response protein 1 (EGR-1) (Krox-24 protein) (Transcription factor Zif268) (Nerve growth factor-induced protein A) (NGFI-A) (Transcription factor ETR103) (Zinc finger protein 225) (AT225). [Source:Uniprot/SWISSPROT;Acc:P18146]
15.9357 -23.85 0.000134994 500 7 4 13 [+] picture button
ZYG11B ENSGACT00000019276 zyg-11 homolog B [Source:RefSeq_peptide;Acc:NP_078922]
14.6522 -14.98 0.000140379 500 3 1 1 [+] picture button
C6orf170 ENSGACT00000009031 Uncharacterized protein C6orf170. [Source:Uniprot/SWISSPROT;Acc:Q96NH3]
15.3859 -24.55 0.000162731 172 6 5 9 [+] picture button
SFRS11 (2 of 2) ENSGACT00000023638 Splicing factor arginine/serine-rich 11 (Arginine-rich 54 kDa nuclear protein) (p54). [Source:Uniprot/SWISSPROT;Acc:Q05519]
14.6226 -15.84 0.000167402 379 7 2 9 [+] picture button
NP_991111.1 ENSGACT00000004892 AASA9217 (UNQ9217), mRNA [Source:RefSeq_dna;Acc:NM_205548]
16.3332 -18.63 0.00017439 575 5 1 7 [+] picture button
CCDC12 ENSGACT00000011421 Coiled-coil domain-containing protein 12. [Source:Uniprot/SWISSPROT;Acc:Q8WUD4]
17.168 -25.3 0.000188691 500 5 1 8 [+] picture button
TMCO6 ENSGACT00000023814 transmembrane and coiled-coil domains 6 [Source:RefSeq_peptide;Acc:NP_060972]
15.4009 -23.37 0.000208066 500 4 2 4 [+] picture button
TBC1D16 ENSGACT00000015540 TBC1 domain family member 16. [Source:Uniprot/SWISSPROT;Acc:Q8TBP0]
16.6843 -22.42 0.000219393 500 6 3 10 [+] picture button
RARS2 ENSGACT00000010913 Probable arginyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.19) (Arginine--tRNA ligase) (ArgRS) (Arginyl-tRNA synthetase-like). [Source:Uniprot/SWISSPROT;Acc:Q5T160]
14.8951 -17.46 0.000226729 500 3 1 4 [+] picture button
OPTN ENSGACT00000025375 Optineurin (Optic neuropathy-inducing protein) (E3-14.7K-interacting protein) (FIP-2) (Huntingtin-interacting protein HYPL) (NEMO-related protein) (Transcription factor IIIA-interacting protein) (TFIIIA- IntP). [Source:Uniprot/SWISSPROT;Acc:Q96CV9]
15.2435 -19.12 0.00023563 588 6 3 10 [+] picture button
C13orf24 ENSGACT00000012969 Progesterone-induced-blocking factor 1. [Source:Uniprot/SWISSPROT;Acc:Q8WXW3]
16.6133 -15.99 0.000260762 500 5 1 6 [+] picture button
NP_075384.3 ENSGACT00000008922 CDNA FLJ12949 fis, clone NT2RP2005336, weakly similar to TRICHOHYALIN. [Source:Uniprot/SPTREMBL;Acc:Q9H978]
16.2459 -20.88 0.000273558 552 5 1 5 [+] picture button
SYN3 ENSGACT00000025340 Synapsin-3 (Synapsin III). [Source:Uniprot/SWISSPROT;Acc:O14994]
16.8203 -21.78 0.000286132 500 5 1 5 [+] picture button
CPSF6 ENSGACT00000026071 Cleavage and polyadenylation specificity factor 6 (Cleavage and polyadenylation specificity factor 68 kDa subunit) (CPSF 68 kDa subunit) (Pre-mRNA cleavage factor Im 68 kDa subunit) (Protein HPBRII- 4/7). [Source:Uniprot/SWISSPROT;Acc:Q16630]
15.294 -19.26 0.000297353 500 4 1 5 [+] picture button
EDG6 ENSGACT00000013938 Sphingosine 1-phosphate receptor Edg-6 (S1P receptor Edg-6) (Endothelial differentiation G-protein coupled receptor 6) (Sphingosine 1-phosphate receptor 4) (S1P4). [Source:Uniprot/SWISSPROT;Acc:O95977]
16.3951 -21.23 0.000302309 500 6 2 7 [+] picture button
Q5JZ71_HUMAN ENSGACT00000005138 OTTHUMP00000028979 (KIAA1644 protein). [Source:Uniprot/SPTREMBL;Acc:Q5JZ71]
15.7524 -14.63 0.00031502 500 7 1 10 [+] picture button
GBA3 ENSGACT00000025884 Cytosolic beta-glucosidase (EC 3.2.1.21) (Cytosolic beta-glucosidase- like protein 1). [Source:Uniprot/SWISSPROT;Acc:Q9H227]
15.294 -15.02 0.000330923 500 4 1 4 [+] picture button
KCNK1 ENSGACT00000007741 Potassium channel subfamily K member 1 (Inward rectifying potassium channel protein TWIK-1) (Potassium channel KCNO1). [Source:Uniprot/SWISSPROT;Acc:O00180]
15.9357 -17.3 0.000349666 500 4 1 5 [+] picture button
SC5DL (1 of 2) ENSGACT00000027520 Lathosterol oxidase (EC 1.14.21.6) (Lathosterol 5-desaturase) (Delta(7)-sterol 5-desaturase) (C-5 sterol desaturase) (Sterol-C5- desaturase). [Source:Uniprot/SWISSPROT;Acc:O75845]
14.7071 -14.08 0.000366623 263 6 1 11 [+] picture button
DYNC2LI1 ENSGACT00000014115 dynein 2 light intermediate chain isoform 1 [Source:RefSeq_peptide;Acc:NP_057092]
15.1596 -13.71 0.000377206 299 6 2 14 [+] picture button
NFS1 ENSGACT00000005539 Cysteine desulfurase, mitochondrial precursor (EC 2.8.1.7). [Source:Uniprot/SWISSPROT;Acc:Q9Y697]
15.187 -15.55 0.000378902 500 5 4 6 [+] picture button
Q69YJ1_HUMAN ENSGACT00000004654 Homolog of Homo sapiens "Pleckstrin homology domain containing, family M (With RUN domain) member 1 [Source:IPI;Acc:IPI00000764]"Homolog of Homo sapiens "Pleckstrin homology domain containing, family M (With RUN domain) member 1 [Source:IPI;Acc:IPI00000764]" BY ORTHOLOGY TO:SINFRUT00000129493
16.3989 -20.85 0.000391379 500 7 2 11 [+] picture button

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Download table: GFF TXT
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