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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-184

759 hits found.


Page 1 of 16
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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AARS ENSGACT00000003527 Alanyl-tRNA synthetase, cytoplasmic (EC 6.1.1.7) (Alanine--tRNA ligase) (AlaRS) (Renal carcinoma antigen NY-REN-42). [Source:Uniprot/SWISSPROT;Acc:P49588]
16.5665 -24.85 4.11043e-07 551 4 1 6 [+] picture button
ARHGDIA (1 of 2) ENSGACT00000017642 Rho GDP-dissociation inhibitor 1 (Rho GDI 1) (Rho-GDI alpha). [Source:Uniprot/SWISSPROT;Acc:P52565]
18.0606 -25.34 5.7027e-07 288 4 4 4 [+] picture button
LEAP2 ENSGACT00000024839 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2). [Source:Uniprot/SWISSPROT;Acc:Q969E1]
17.4379 -27.81 8.71405e-07 500 7 1 6 [+] picture button
DEPDC5 ENSGACT00000019416 DEP domain-containing protein 5. [Source:Uniprot/SWISSPROT;Acc:O75140]
15.6602 -19.5 1e-06 500 10 1 9 [+] picture button
XAB1 ENSGACT00000023357 XPA-binding protein 1. [Source:Uniprot/SWISSPROT;Acc:Q9HCN4]
17.8988 -19.55 1e-06 500 6 1 3 [+] picture button
DYM ENSGACT00000021836 Dymeclin (Dyggve-Melchior-Clausen syndrome protein). [Source:Uniprot/SWISSPROT;Acc:Q7RTS9]
17.7072 -24.04 1.60205e-06 500 6 1 10 [+] picture button
PISD ENSGACT00000020464 Phosphatidylserine decarboxylase proenzyme (EC 4.1.1.65) [Contains: Phosphatidylserine decarboxylase alpha chain; Phosphatidylserine decarboxylase beta chain]. [Source:Uniprot/SWISSPROT;Acc:Q9UG56]
17.6042 -23.02 4.88478e-06 500 5 2 6 [+] picture button
EIF4EBP2 ENSGACT00000011547 Eukaryotic translation initiation factor 4E-binding protein 2 (4E-BP2) (eIF4E-binding protein 2). [Source:Uniprot/SWISSPROT;Acc:Q13542]
16.5365 -19.9 8.3945e-06 367 5 3 8 [+] picture button
CDR2 (2 of 2) ENSGACT00000015268 Cerebellar degeneration-related protein 2 (Paraneoplastic cerebellar degeneration-associated antigen) (Major Yo paraneoplastic antigen). [Source:Uniprot/SWISSPROT;Acc:Q01850]
16.4162 -16.81 1.04148e-05 500 5 1 7 [+] picture button
CARM1 ENSGACT00000007364 Histone-arginine methyltransferase CARM1 (EC 2.1.1.125) (EC 2.1.1.-) (Protein arginine N-methyltransferase 4) (Coactivator-associated arginine methyltransferase 1). [Source:Uniprot/SWISSPROT;Acc:Q86X55]
15.7745 -20.61 1.46422e-05 500 4 2 6 [+] picture button
VAPB (1 of 2) ENSGACT00000008162 Vesicle-associated membrane protein-associated protein B/C (VAMP- associated protein B/C) (VAMP-B/VAMP-C) (VAP-B/VAP-C). [Source:Uniprot/SWISSPROT;Acc:O95292]
18.5168 -25.51 1.69189e-05 533 4 3 4 [+] picture button
GARNL4 ENSGACT00000008261 GTPase activating Rap/RanGAP domain-like 4 [Source:RefSeq_peptide;Acc:NP_055900]
16.1453 -22.75 2.16765e-05 500 6 1 8 [+] picture button
MARK1 (1 of 2) ENSGACT00000010736 Serine/threonine-protein kinase MARK1 (EC 2.7.11.1) (MAP/microtubule affinity-regulating kinase 1). [Source:Uniprot/SWISSPROT;Acc:Q9P0L2]
15.6176 -16.44 2.47058e-05 500 6 4 15 [+] picture button
C10orf118 ENSGACT00000008729 Uncharacterized protein C10orf118 (CTCL tumor antigen HD-CL-01/L14-2). [Source:Uniprot/SWISSPROT;Acc:Q7Z3E2]
17.26 -25.64 2.49791e-05 500 9 1 8 [+] picture button
HAND2 ENSGACT00000021715 Heart- and neural crest derivatives-expressed protein 2 (Deciduum, heart, autonomic nervous system and neural crest derivatives-expressed protein 2) (dHAND). [Source:Uniprot/SWISSPROT;Acc:P61296]
15.8257 -18.49 2.64278e-05 628 6 1 9 [+] picture button
ENSGACT00000019430 similar to glutamate transporter 2B (LOC572483), mRNA [Source:RefSeq_dna;Acc:XR_029553]similar to glutamate transporter 2B (LOC572483), mRNA [Source:RefSeq_dna;Acc:XR_029553] BY ORTHOLOGY TO:ENSDART00000103508
16.4769 -25.92 2.86385e-05 496 4 1 4 [+] picture button
THOC2 ENSGACT00000026971 THO complex subunit 2 (Tho2). [Source:Uniprot/SWISSPROT;Acc:Q8NI27]
16.9562 -19.61 3.08123e-05 500 6 1 7 [+] picture button
SIDT2 ENSGACT00000008095 SID1 transmembrane family member 2 precursor. [Source:Uniprot/SWISSPROT;Acc:Q8NBJ9]
15.9613 -24.66 3.20467e-05 660 8 1 9 [+] picture button
RHEB ENSGACT00000022073 GTP-binding protein Rheb precursor (Ras homolog enriched in brain). [Source:Uniprot/SWISSPROT;Acc:Q15382]
15.7211 -18.59 3.60642e-05 698 4 2 5 [+] picture button
NTRK3 (1 of 2) ENSGACT00000019558 NT-3 growth factor receptor precursor (EC 2.7.10.1) (Neurotrophic tyrosine kinase receptor type 3) (TrkC tyrosine kinase) (GP145-TrkC) (Trk-C). [Source:Uniprot/SWISSPROT;Acc:Q16288]
16.8033 -19.21 3.97885e-05 130 4 5 4 [+] picture button
CBS ENSGACT00000019352 Cystathionine beta-synthase (EC 4.2.1.22) (Serine sulfhydrase) (Beta- thionase). [Source:Uniprot/SWISSPROT;Acc:P35520]
16.8482 -18.73 4.25218e-05 500 11 1 16 [+] picture button
EFCBP2 ENSGACT00000004063 EF-hand calcium-binding protein 2 (Neuronal calcium-binding protein 2) (Synaptotagmin-interacting protein 2) (Stip-2). [Source:Uniprot/SWISSPROT;Acc:Q7Z6G3]
15.8762 -18.56 4.53768e-05 500 3 2 5 [+] picture button
ICA1 ENSGACT00000017063 Islet cell autoantigen 1 (69 kDa islet cell autoantigen) (ICA69) (p69) (Islet cell autoantigen p69) (ICAp69). [Source:Uniprot/SWISSPROT;Acc:Q05084]
16.7171 -20.98 4.59794e-05 614 5 1 5 [+] picture button
B4GALT5 ENSGACT00000002809 Beta-1,4-galactosyltransferase 5 (EC 2.4.1.-) (Beta-1,4-GalTase 5) (Beta4Gal-T5) (b4Gal-T5) (UDP-galactose:beta-N-acetylglucosamine beta- 1,4-galactosyltransferase 5) (UDP-Gal:beta-GlcNAc beta-1,4- galactosyltransferase 5) (Beta-1,4-GalT II). [Source:Uniprot/SWISSPROT;Acc:O43286]
15.9979 -21.59 5.60825e-05 500 3 1 6 [+] picture button
SLC35D3 ENSGACT00000017967 solute carrier family 35, member D3 [Source:RefSeq_peptide;Acc:NP_001008783]
18.7965 -25.02 6.21374e-05 500 8 2 6 [+] picture button
FEM1B ENSGACT00000010670 fem-1 homolog b [Source:RefSeq_peptide;Acc:NP_056137]
15.7504 -17.89 6.88584e-05 500 7 1 9 [+] picture button
DVL3 (1 of 2) ENSGACT00000020420 Segment polarity protein dishevelled homolog DVL-3 (Dishevelled-3) (DSH homolog 3). [Source:Uniprot/SWISSPROT;Acc:Q92997]
16.9562 -26.9 6.88736e-05 500 6 1 10 [+] picture button
COL9A2 ENSGACT00000009766 Collagen alpha-2(IX) chain precursor. [Source:Uniprot/SWISSPROT;Acc:Q14055]
15.6875 -20.49 6.93185e-05 500 5 3 7 [+] picture button
CALM2 ENSGACT00000006828 Calmodulin (CaM). [Source:Uniprot/SWISSPROT;Acc:P62158]
16.5662 -22.97 7.59918e-05 383 6 1 5 [+] picture button
OTOF (1 of 2) ENSGACT00000011873 Otoferlin (Fer-1-like protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9HC10]
16.055 -16.73 8.02288e-05 500 4 1 5 [+] picture button
KIAA0430 ENSGACT00000025385 Limkain-b1. [Source:Uniprot/SWISSPROT;Acc:Q9Y4F3]
15.9842 -22.23 8.85061e-05 500 9 2 10 [+] picture button
CDH16 ENSGACT00000020335 Cadherin-16 precursor (Kidney-specific cadherin) (Ksp-cadherin). [Source:Uniprot/SWISSPROT;Acc:O75309]
16.0586 -16.73 9.66336e-05 500 7 2 6 [+] picture button
ADPGK ENSGACT00000009611 ADP-dependent glucokinase (EC 2.7.1.147) (ADPGK) (ADP-GK) (RbBP-35). [Source:Uniprot/SWISSPROT;Acc:Q9BRR6]
16.3082 -23.9 0.000103114 500 9 3 8 [+] picture button
RGS17 ENSGACT00000013728 Regulator of G-protein signaling 17 (RGS17). [Source:Uniprot/SWISSPROT;Acc:Q9UGC6]
15.7739 -19.63 0.000110268 500 6 3 8 [+] picture button
PCTK1 ENSGACT00000000372 Serine/threonine-protein kinase PCTAIRE-1 (EC 2.7.11.22) (PCTAIRE- motif protein kinase 1). [Source:Uniprot/SWISSPROT;Acc:Q00536]
16.4964 -15.83 0.000111547 500 5 1 3 [+] picture button
CLU ENSGACT00000010141 Clusterin precursor (Complement-associated protein SP-40,40) (Complement cytolysis inhibitor) (CLI) (NA1/NA2) (Apolipoprotein J) (Apo-J) (Testosterone-repressed prostate message 2) (TRPM-2) [Contains: Clusterin beta chain (ApoJalpha) (Complement cytolysis [Source:Uniprot/SWISSPROT;Acc:P10909]
16.4162 -21.4 0.000133976 500 4 2 5 [+] picture button
IGSF8 ENSGACT00000008805 Immunoglobulin superfamily member 8 precursor (CD81 partner 3) (Glu- Trp-Ile EWI motif-containing protein 2) (EWI-2) (Keratinocytes- associated transmembrane protein 4) (KCT-4) (LIR-D1) (CD316 antigen). [Source:Uniprot/SWISSPROT;Acc:Q969P0]
15.9574 -21.1 0.000145666 500 3 1 4 [+] picture button
GRSF1 ENSGACT00000019092 G-rich sequence factor 1 (GRSF-1). [Source:Uniprot/SWISSPROT;Acc:Q12849]
19.4523 -27.82 0.000169327 313 7 3 8 [+] picture button
EHHADH ENSGACT00000008032 Peroxisomal bifunctional enzyme (PBE) (PBFE) [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)]. [Source:Uniprot/SWISSPROT;Acc:Q08426]
17.9282 -22.97 0.000205816 500 8 2 11 [+] picture button
NCOR2 ENSGACT00000016366 Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor- associating factor) (TRAC) (CTG repeat protein 26) (SMAP270). [Source:Uniprot/SWISSPROT;Acc:Q9Y618]
15.6602 -20.23 0.000209012 500 4 2 8 [+] picture button
ABHD3 ENSGACT00000022915 Abhydrolase domain-containing protein 3 (EC 3.1.1.-) (Lung alpha/beta hydrolase 3). [Source:Uniprot/SWISSPROT;Acc:Q8WU67]
17.1936 -20.36 0.000210029 500 5 1 6 [+] picture button
BCAT2 ENSGACT00000019419 Branched-chain-amino-acid aminotransferase, mitochondrial precursor (EC 2.6.1.42) (BCAT(m)) (Placental protein 18) (PP18). [Source:Uniprot/SWISSPROT;Acc:O15382]
15.9002 -22.34 0.000220746 500 6 1 7 [+] picture button
ATG12 ENSGACT00000014035 Autophagy-related protein 12 (APG12-like). [Source:Uniprot/SWISSPROT;Acc:O94817]
17.4224 -24.64 0.000224792 491 4 1 4 [+] picture button
NP_001001694.1 ENSGACT00000025164 CDNA FLJ41993 fis, clone SPLEN2017104. [Source:Uniprot/SPTREMBL;Acc:Q6ZVW7]
16.1274 -13.59 0.000238574 500 6 1 5 [+] picture button
TERT ENSGACT00000012262 Telomerase reverse transcriptase (EC 2.7.7.49) (Telomerase catalytic subunit) (HEST2) (Telomerase-associated protein 2) (TP2). [Source:Uniprot/SWISSPROT;Acc:O14746]
16.2002 -22.67 0.00024192 500 4 1 4 [+] picture button
ZFYVE9 (2 of 2) ENSGACT00000015818 Zinc finger FYVE domain-containing protein 9 (Mothers against decapentaplegic homolog-interacting protein) (Madh-interacting protein) (Smad anchor for receptor activation) (Receptor activation anchor) (hSARA) (Novel serine protease) (NSP). [Source:Uniprot/SWISSPROT;Acc:O95405]
17.1063 -21.7 0.000246912 480 7 1 8 [+] picture button
NDUFB3 ENSGACT00000016485 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase B12 subunit) (Complex I-B12) (CI-B12). [Source:Uniprot/SWISSPROT;Acc:O43676]
16.0922 -24.25 0.000260507 500 7 2 8 [+] picture button
RIMBP2 (2 of 2) ENSGACT00000023293 RIM-binding protein 2 (RIM-BP2). [Source:Uniprot/SWISSPROT;Acc:O15034]
17.3885 -18.66 0.000269068 500 5 3 7 [+] picture button
NASP (2 of 2) ENSGACT00000008624 Nuclear autoantigenic sperm protein (NASP). [Source:Uniprot/SWISSPROT;Acc:P49321]
16.2317 -16.03 0.000283509 110 3 1 3 [+] picture button
CACNA2D4 (2 of 2) ENSGACT00000011239 voltage-gated calcium channel alpha(2)delta-4 subunit [Source:RefSeq_peptide;Acc:NP_758952]
16.4603 -16.2 0.000297522 314 5 1 6 [+] picture button

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Download table: GFF TXT
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