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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-181a

1109 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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NR6A1 ENSGACT00000004676 Orphan nuclear receptor NR6A1 (Germ cell nuclear factor) (GCNF) (Retinoid receptor-related testis-specific receptor) (RTR). [Source:Uniprot/SWISSPROT;Acc:Q15406]
19.6849 -23.2 0.000000000000199162 125 2 12 2 [+] picture button
BHLHB2 (1 of 2) ENSGACT00000015850 Class B basic helix-loop-helix protein 2 (bHLHB2) (Differentially expressed in chondrocytes protein 1) (DEC1) (Enhancer-of-split and hairy-related protein 2) (SHARP-2) (Stimulated by retinoic acid gene 13 protein). [Source:Uniprot/SWISSPROT;Acc:O14503]
18.8848 -28.39 0.000000000967426 500 5 4 6 [+] picture button
TMEM64 ENSGACT00000006138 transmembrane protein 64 [Source:RefSeq_peptide;Acc:NP_001008495]
16.4704 -12.26 0.000000016547 500 8 5 13 [+] picture button
PLEKHA3 ENSGACT00000015393 Pleckstrin homology domain-containing family A member 3 (Phosphoinositol 4-phosphate adaptor protein 1) (FAPP-1). [Source:Uniprot/SWISSPROT;Acc:Q9HB20]
16.4378 -20.96 0.000000103973 500 6 1 5 [+] picture button
TMED8 ENSGACT00000010294 Protein TMED8. [Source:Uniprot/SWISSPROT;Acc:Q6PL24]
16.4214 -18.04 0.00000012456 500 4 2 3 [+] picture button
BHLHB2 (2 of 2) ENSGACT00000000850 Class B basic helix-loop-helix protein 2 (bHLHB2) (Differentially expressed in chondrocytes protein 1) (DEC1) (Enhancer-of-split and hairy-related protein 2) (SHARP-2) (Stimulated by retinoic acid gene 13 protein). [Source:Uniprot/SWISSPROT;Acc:O14503]
16.6264 -12.68 0.000000130686 500 10 4 14 [+] picture button
TMED4 ENSGACT00000017479 Transmembrane emp24 domain-containing protein 4 precursor. [Source:Uniprot/SWISSPROT;Acc:Q7Z7H5]
17.7117 -23.27 0.000000374301 697 5 1 5 [+] picture button
CYSLTR1 ENSGACT00000024608 Cysteinyl leukotriene receptor 1 (CysLTR1) (Cysteinyl leukotriene D4 receptor) (LTD4 receptor) (HG55) (HMTMF81). [Source:Uniprot/SWISSPROT;Acc:Q9Y271]
17.7808 -23.99 0.000000898141 500 4 1 6 [+] picture button
GAD2 ENSGACT00000006820 Glutamate decarboxylase 2 (EC 4.1.1.15) (Glutamate decarboxylase 65 kDa isoform) (GAD-65) (65 kDa glutamic acid decarboxylase). [Source:Uniprot/SWISSPROT;Acc:Q05329]
17.0345 -14.07 0.00000124709 500 6 3 9 [+] picture button
ENSGACT00000004694 nuclear receptor co-repressor/HDAC3 complex subunit [Source:RefSeq_peptide;Acc:NP_001026540]nuclear receptor co-repressor/HDAC3 complex subunit [Source:RefSeq_peptide;Acc:NP_001026540] BY ORTHOLOGY TO:ENSGALT00000001912
16.5579 -16.58 0.00000135808 500 10 5 11 [+] picture button
PRDX3 ENSGACT00000004150 Thioredoxin-dependent peroxide reductase, mitochondrial precursor (EC 1.11.1.15) (Peroxiredoxin-3) (PRX III) (Antioxidant protein 1) (AOP-1) (Protein MER5 homolog) (HBC189). [Source:Uniprot/SWISSPROT;Acc:P30048]
16.2909 -18.54 0.00000231468 71 2 7 2 [+] picture button
PLCL2 ENSGACT00000017253 phospholipase C-like 2 [Source:RefSeq_peptide;Acc:NP_055999]
18.0994 -14.84 0.00000282338 500 8 3 10 [+] picture button
RGMA ENSGACT00000017539 Repulsive guidance molecule A precursor (RGM domain family member A). [Source:Uniprot/SWISSPROT;Acc:Q96B86]
16.3799 -12.74 0.00000293507 500 7 1 9 [+] picture button
PLEKHJ1 ENSGACT00000020151 pleckstrin homology domain containing, family J member 1 [Source:RefSeq_peptide;Acc:NP_060519]
16.6303 -16.07 0.00000310751 181 4 2 9 [+] picture button
FAM58B ENSGACT00000017421 similar to CG31232-PA, isoform A (LOC401218), mRNA [Source:RefSeq_dna;Acc:XR_016722]similar to CG31232-PA, isoform A (LOC401218), mRNA [Source:RefSeq_dna;Acc:XR_016722] BY ORTHOLOGY TO:ENST00000276345
17.002 -22.51 0.00000319764 756 2 1 2 [+] picture button
DMRT3 ENSGACT00000019180 Doublesex and mab-3-related transcription factor 3. [Source:Uniprot/SWISSPROT;Acc:Q9NQL9]
16.5954 -24.46 0.00000331194 500 6 1 6 [+] picture button
NP_001017920.1 ENSGACT00000007646 death-associated protein-like 1 (LOC92196), mRNA [Source:RefSeq_dna;Acc:NM_001017920]
18.4121 -16.33 0.00000462288 356 9 2 18 [+] picture button
TRADD ENSGACT00000020987 Tumor necrosis factor receptor type 1-associated DEATH domain protein (TNFR1-associated DEATH domain protein) (TNFRSF1A-associated via death domain). [Source:Uniprot/SWISSPROT;Acc:Q15628]
18.4837 -18.81 0.00000659538 500 6 2 9 [+] picture button
IKBKG ENSGACT00000017452 NF-kappa-B essential modulator (NEMO) (NF-kappa-B essential modifier) (Inhibitor of nuclear factor kappa-B kinase subunit gamma) (IkB kinase subunit gamma) (I-kappa-B kinase gamma) (IKK-gamma) (IKKG) (IkB kinase-associated protein 1) (IKKAP1) (FIP-3). [Source:Uniprot/SWISSPROT;Acc:Q9Y6K9]
16.6096 -14.53 0.000006821 500 4 3 6 [+] picture button
HIC2 ENSGACT00000005633 Hypermethylated in cancer 2 protein (Hic-2) (Hic-3) (HIC1-related gene on chromosome 22) (Zinc finger and BTB domain-containing protein 30). [Source:Uniprot/SWISSPROT;Acc:Q96JB3]
16.5774 -11.57 0.000006974 500 5 4 7 [+] picture button
DNAJC10 ENSGACT00000010867 DnaJ homolog subfamily C member 10 precursor (ER-resident protein ERdj5) (Macrothioredoxin) (MTHr). [Source:Uniprot/SWISSPROT;Acc:Q8IXB1]
20.0532 -24.33 0.00000715599 407 8 1 10 [+] picture button
WEE1 ENSGACT00000012920 Wee1-like protein kinase (EC 2.7.10.2) (Wee1A kinase) (WEE1hu). [Source:Uniprot/SWISSPROT;Acc:P30291]
16.3635 -18.36 0.00000764698 500 8 3 14 [+] picture button
MITD1 ENSGACT00000003839 MIT domain-containing protein 1. [Source:Uniprot/SWISSPROT;Acc:Q8WV92]
16.2856 -8.76 0.00000779592 500 4 1 7 [+] picture button
HOXB5 ENSGACT00000005189 Homeobox protein Hox-B5 (Hox-2A) (HHO.C10) (HU-1). [Source:Uniprot/SWISSPROT;Acc:P09067]
16.4823 -10.76 0.00000788365 500 4 2 3 [+] picture button
GLT8D4 ENSGACT00000015617 glycosyltransferase 8 domain containing 4 [Source:RefSeq_peptide;Acc:NP_001073862]
16.3635 -14.45 0.00000836148 500 7 1 9 [+] picture button
ARSJ ENSGACT00000002094 arylsulfatase family, member J (ARSJ), mRNA [Source:RefSeq_dna;Acc:NM_024590]
16.4989 -10.99 0.0000101928 500 4 2 5 [+] picture button
NGLY1 ENSGACT00000010663 Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase (EC 3.5.1.52) (PNGase) (hPNGase) (Peptide:N-glycanase) (N-glycanase 1). [Source:Uniprot/SWISSPROT;Acc:Q96IV0]
16.7663 -14.56 0.0000110189 529 3 3 6 [+] picture button
C1orf82 ENSGACT00000020726 UPF0385 protein C1orf82. [Source:Uniprot/SWISSPROT;Acc:Q8IXW5]
16.8566 -17.67 0.0000123984 165 2 3 3 [+] picture button
PPP1R15B ENSGACT00000008886 protein phosphatase 1, regulatory subunit 15B [Source:RefSeq_peptide;Acc:NP_116222]
16.9137 -13.01 0.0000131212 628 5 1 8 [+] picture button
LGMN ENSGACT00000016142 Legumain precursor (EC 3.4.22.34) (Asparaginyl endopeptidase) (Protease, cysteine 1). [Source:Uniprot/SWISSPROT;Acc:Q99538]
18.3587 -19.89 0.000013188 402 7 4 14 [+] picture button
MON1B ENSGACT00000001618 MON1 homolog B [Source:RefSeq_peptide;Acc:NP_055755]
17.6469 -24.43 0.0000134191 500 8 2 8 [+] picture button
GNAQ ENSGACT00000010483 Guanine nucleotide-binding protein G(q) subunit alpha (Guanine nucleotide-binding protein alpha-q). [Source:Uniprot/SWISSPROT;Acc:P50148]
16.6234 -12.61 0.0000159293 457 6 2 7 [+] picture button
ABCG5 ENSGACT00000014133 ATP-binding cassette sub-family G member 5 (Sterolin-1). [Source:Uniprot/SWISSPROT;Acc:Q9H222]
16.4066 -16.61 0.0000165677 459 7 2 10 [+] picture button
VRK3 ENSGACT00000020971 Serine/threonine-protein kinase VRK3 (EC 2.7.11.1) (Vaccinia-related kinase 3). [Source:Uniprot/SWISSPROT;Acc:Q8IV63]
16.6463 -20.74 0.0000169065 586 7 1 9 [+] picture button
CALN1 (2 of 2) ENSGACT00000027171 Calneuron-1 (Calcium-binding protein CaBP8). [Source:Uniprot/SWISSPROT;Acc:Q9BXU9]
17.9677 -15.37 0.0000175029 500 6 3 12 [+] picture button
CAMSAP1L1 (2 of 2) ENSGACT00000019986 calmodulin regulated spectrin-associated protein 1-like 1 [Source:RefSeq_peptide;Acc:NP_982284]
18.5138 -25.11 0.000018461 500 8 4 10 [+] picture button
TRPA1 ENSGACT00000003674 Transient receptor potential cation channel subfamily A member 1 (Ankyrin-like with transmembrane domains protein 1) (Transformation sensitive-protein p120). [Source:Uniprot/SWISSPROT;Acc:O75762]
17.1121 -13.13 0.0000203927 500 6 2 7 [+] picture button
C7orf41 ENSGACT00000011214 Uncharacterized protein C7orf41. [Source:Uniprot/SPTREMBL;Acc:Q8N3F0]
16.6303 -15.12 0.0000208558 258 3 1 5 [+] picture button
HOP_HUMAN ENSGACT00000022161 Homeodomain-only protein (Lung cancer-associated Y protein) (Odd homeobox protein 1) (Not expressed in choriocarcinoma protein 1). [Source:Uniprot/SWISSPROT;Acc:Q9BPY8]
16.8566 -16.81 0.0000219295 292 8 2 14 [+] picture button
CTDSPL2 (2 of 2) ENSGACT00000008355 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 [Source:RefSeq_peptide;Acc:NP_057480]
16.5352 -15.6 0.0000241592 500 5 4 7 [+] picture button
PURA (1 of 2) ENSGACT00000027370 Transcriptional activator protein Pur-alpha (Purine-rich single- stranded DNA-binding protein alpha). [Source:Uniprot/SWISSPROT;Acc:Q00577]
16.306 -18.26 0.0000260426 500 5 8 6 [+] picture button
PGAM5 ENSGACT00000017141 Bcl-XL-binding protein v68 [Source:RefSeq_peptide;Acc:NP_612642]
16.4025 -17.1 0.0000267162 500 7 2 10 [+] picture button
PRTG (2 of 2) ENSGACT00000008069 protogenin [Source:RefSeq_peptide;Acc:NP_776175]
17.326 -21.14 0.0000280085 500 7 2 6 [+] picture button
LYAR_HUMAN ENSGACT00000012127 Cell growth-regulating nucleolar protein. [Source:Uniprot/SWISSPROT;Acc:Q9NX58]
17.5399 -17.78 0.0000284584 500 7 3 9 [+] picture button
GLB1 ENSGACT00000023345 Beta-galactosidase-related protein precursor (Beta-galactosidase-like protein) (S-Gal) (Elastin-binding protein) (EBP). [Source:Uniprot/SWISSPROT;Acc:P16279]
18.1015 -20.56 0.0000299739 364 10 1 17 [+] picture button
E2F7 ENSGACT00000025785 E2F transcription factor 7 [Source:RefSeq_peptide;Acc:NP_976328]
16.4704 -17.83 0.000030179 500 5 2 4 [+] picture button
ENSGACT00000022772 Homolog of Brachydanio rerio "Zinc finger protein Zic6. [Source:Uniprot/SPTREMBL;Acc:Q6PWU7]"Homolog of Brachydanio rerio "Zinc finger protein Zic6. [Source:Uniprot/SPTREMBL;Acc:Q6PWU7]" BY ORTHOLOGY TO:SINFRUT00000144475
16.5688 -15.74 0.0000317027 500 4 2 5 [+] picture button
ADCK1 ENSGACT00000026654 Uncharacterized aarF domain-containing protein kinase 1 precursor (EC 2.7.-.-). [Source:Uniprot/SWISSPROT;Acc:Q86TW2]
18.9566 -19.96 0.0000324322 307 5 1 7 [+] picture button
SLC25A22 ENSGACT00000007287 Mitochondrial glutamate carrier 1 (GC-1) (Glutamate/H(+) symporter 1) (Solute carrier family 25 member 22). [Source:Uniprot/SWISSPROT;Acc:Q9H936]
18.3955 -19.39 0.0000343627 500 7 4 9 [+] picture button
LONRF1 ENSGACT00000023886 LON peptidase N-terminal domain and RING finger protein 1 (RING finger protein 191). [Source:Uniprot/SWISSPROT;Acc:Q17RB8]
18.1816 -23.25 0.0000345599 500 4 3 4 [+] picture button

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Download table: GFF TXT
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