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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-18

789 hits found.


Page 1 of 16
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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NEDD9 ENSGACT00000003060 Enhancer of filamentation 1 (HEF1) (CRK-associated substrate-related protein) (CAS-L) (CasL) (p105) (Protein NEDD9) (Renal carcinoma antigen NY-REN-12). [Source:Uniprot/SWISSPROT;Acc:Q14511]
17.5207 -18.54 0.000000000128591 500 7 3 11 [+] picture button
ANUBL1 ENSGACT00000010290 AN1-type zinc finger and ubiquitin domain-containing protein 1 (AN1- type zinc finger protein 4). [Source:Uniprot/SWISSPROT;Acc:Q86XD8]
18.1175 -21.28 0.00000000562866 450 8 3 19 [+] picture button
PTPN4 ENSGACT00000010366 Tyrosine-protein phosphatase non-receptor type 4 (EC 3.1.3.48) (Protein-tyrosine phosphatase MEG1) (PTPase-MEG1) (MEG). [Source:Uniprot/SWISSPROT;Acc:P29074]
16.7083 -20.92 0.00000000920268 500 7 4 15 [+] picture button
STYX ENSGACT00000021618 Serine/threonine/tyrosine-interacting protein (Protein tyrosine phosphatase-like protein). [Source:Uniprot/SWISSPROT;Acc:Q8WUJ0]
16.8493 -16.27 0.000000016335 500 12 7 20 [+] picture button
PERQ1 ENSGACT00000026373 PERQ amino acid-rich with GYF domain-containing protein 1 (Grb10- interacting GYF protein 1). [Source:Uniprot/SWISSPROT;Acc:O75420]
17.2807 -17.46 0.0000000190509 500 7 3 15 [+] picture button
TMEM64 ENSGACT00000006138 transmembrane protein 64 [Source:RefSeq_peptide;Acc:NP_001008495]
16.1192 -15.31 0.0000000290032 500 8 5 13 [+] picture button
SMAD2 ENSGACT00000017652 Mothers against decapentaplegic homolog 2 (SMAD 2) (Mothers against DPP homolog 2) (Mad-related protein 2) (hMAD-2) (JV18-1) (hSMAD2). [Source:Uniprot/SWISSPROT;Acc:Q15796]
17.0564 -17.37 0.0000000313699 500 3 4 9 [+] picture button
XYLT2 ENSGACT00000017580 Xylosyltransferase 2 (EC 2.4.2.26) (Xylosyltransferase II) (XylT-II) (XT-II) (Peptide O-xylosyltransferase 1). [Source:Uniprot/SWISSPROT;Acc:Q9H1B5]
16.0864 -13.58 0.0000000527448 500 6 3 9 [+] picture button
WEE1 ENSGACT00000012920 Wee1-like protein kinase (EC 2.7.10.2) (Wee1A kinase) (WEE1hu). [Source:Uniprot/SWISSPROT;Acc:P30291]
17.1939 -20.15 0.000000066518 500 8 3 14 [+] picture button
Q5T4T1_HUMAN ENSGACT00000003063 Novel protein. [Source:Uniprot/SPTREMBL;Acc:Q5T4T1]
16.2267 -15.04 0.0000000927271 500 5 2 6 [+] picture button
ZNF367 ENSGACT00000008912 zinc finger protein 367 [Source:RefSeq_peptide;Acc:NP_710162]
16.9496 -19.58 0.000000108636 500 4 4 13 [+] picture button
NP_219485.1 ENSGACT00000015355 sarcoma antigen NY-SAR-48 isoform a [Source:RefSeq_peptide;Acc:NP_219485]
16.6071 -16.17 0.000000310677 484 3 7 7 [+] picture button
ARID4B ENSGACT00000005700 AT-rich interactive domain-containing protein 4B (ARID domain- containing protein 4B) (Histone deacetylase complex subunit SAP180) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Retinoblastoma-binding protein 1-like 1) (Breast c [Source:Uniprot/SWISSPROT;Acc:Q4LE39]
16.9076 -19.04 0.00000046294 500 5 11 10 [+] picture button
PKNOX1 ENSGACT00000001886 Homeobox protein PKNOX1 (PBX/knotted homeobox 1) (Homeobox protein PREP-1). [Source:Uniprot/SWISSPROT;Acc:P55347]
16.4172 -17.01 0.00000047414 500 5 4 9 [+] picture button
CYGB (2 of 2) ENSGACT00000016856 Cytoglobin (Histoglobin) (HGb) (Stellate cell activation-associated protein). [Source:Uniprot/SWISSPROT;Acc:Q8WWM9]
16.2772 -16.28 0.000000602136 419 7 3 10 [+] picture button
ALAS2 ENSGACT00000009067 5-aminolevulinate synthase, erythroid-specific, mitochondrial precursor (EC 2.3.1.37) (5-aminolevulinic acid synthase) (Delta- aminolevulinate synthase) (Delta-ALA synthetase) (ALAS-E). [Source:Uniprot/SWISSPROT;Acc:P22557]
18.5336 -21.16 0.00000060863 261 5 3 11 [+] picture button
RASL11B ENSGACT00000018820 RAS-like family 11 member B [Source:RefSeq_peptide;Acc:NP_076429]
17.817 -21.14 0.000000790176 500 6 3 13 [+] picture button
MAP3K2 ENSGACT00000020587 Mitogen-activated protein kinase kinase kinase 2 (EC 2.7.11.25) (MAPK/ERK kinase kinase 2) (MEK kinase 2) (MEKK 2). [Source:Uniprot/SWISSPROT;Acc:Q9Y2U5]
19.1613 -23.06 0.00000173467 500 6 4 7 [+] picture button
OBFC2A ENSGACT00000003011 oligonucleotide/oligosaccharide-binding fold containing 2A [Source:RefSeq_peptide;Acc:NP_001026886]
17.3698 -20.18 0.0000021175 500 6 2 9 [+] picture button
EPHA4 ENSGACT00000000128 Ephrin type-A receptor 4 precursor (EC 2.7.10.1) (Tyrosine-protein kinase receptor SEK) (Receptor protein-tyrosine kinase HEK8). [Source:Uniprot/SWISSPROT;Acc:P54764]
16.7262 -15.34 0.00000233521 500 5 10 8 [+] picture button
MICAL2 (2 of 2) ENSGACT00000020794 Protein MICAL-2. [Source:Uniprot/SWISSPROT;Acc:O94851]
17.2389 -19.82 0.00000255868 500 7 3 8 [+] picture button
RIC8B ENSGACT00000015683 Synembryn-B (Brain synembrin) (hSyn) (Protein Ric-8B). [Source:Uniprot/SWISSPROT;Acc:Q9NVN3]
15.953 -13.22 0.00000258894 500 3 1 3 [+] picture button
NP_001027025.1 ENSGACT00000015202 T04F3.1 [Source:RefSeq_peptide;Acc:NP_505963]T04F3.1 [Source:RefSeq_peptide;Acc:NP_505963] BY ORTHOLOGY TO:T04F3.1
17.9772 -22.08 0.00000263098 500 4 3 8 [+] picture button
GPR6 ENSGACT00000015257 Sphingosine 1-phosphate receptor GPR6 (G-protein coupled receptor 6). [Source:Uniprot/SWISSPROT;Acc:P46095]
16.6408 -16.86 0.000002918 500 7 9 12 [+] picture button
GALNT14 ENSGACT00000015972 Polypeptide N-acetylgalactosaminyltransferase 14 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 14) (UDP- GalNAc:polypeptide N-acetylgalactosaminyltransferase 14) (Polypeptide GalNAc transferase 14) (GalNAc-T14) (pp-GaNTase 14). [Source:Uniprot/SWISSPROT;Acc:Q96FL9]
16.1614 -12.24 0.00000306092 500 4 2 5 [+] picture button
SMAD7 ENSGACT00000021842 Mothers against decapentaplegic homolog 7 (SMAD 7) (Mothers against DPP homolog 7) (Smad7) (hSMAD7). [Source:Uniprot/SWISSPROT;Acc:O15105]
16.7879 -17.22 0.00000560548 500 4 9 13 [+] picture button
IKBKG ENSGACT00000017452 NF-kappa-B essential modulator (NEMO) (NF-kappa-B essential modifier) (Inhibitor of nuclear factor kappa-B kinase subunit gamma) (IkB kinase subunit gamma) (I-kappa-B kinase gamma) (IKK-gamma) (IKKG) (IkB kinase-associated protein 1) (IKKAP1) (FIP-3). [Source:Uniprot/SWISSPROT;Acc:Q9Y6K9]
17.5505 -17.99 0.00000864973 500 4 3 6 [+] picture button
DDX5 (2 of 2) ENSGACT00000025500 Probable ATP-dependent RNA helicase DDX5 (EC 3.6.1.-) (DEAD box protein 5) (RNA helicase p68). [Source:Uniprot/SWISSPROT;Acc:P17844]
16.0322 -13.67 0.00000937015 289 11 12 20 [+] picture button
SYBU_HUMAN ENSGACT00000006991 Syntabulin (Syntaxin-1-binding protein) (Golgi-localized syntaphilin- related protein). [Source:Uniprot/SWISSPROT;Acc:Q9NX95]
16.3117 -18.18 0.00000948972 500 9 4 22 [+] picture button
HAPLN2 ENSGACT00000023542 Hyaluronan and proteoglycan link protein 2 precursor (Brain link protein 1). [Source:Uniprot/SWISSPROT;Acc:Q9GZV7]
16.9418 -17.34 0.0000104132 151 3 5 10 [+] picture button
RLF ENSGACT00000012277 Zinc finger protein Rlf (Rearranged L-myc fusion gene protein) (Zn-15- related protein). [Source:Uniprot/SWISSPROT;Acc:Q13129]
16.183 -16.73 0.0000106383 500 5 5 8 [+] picture button
DUSP19 (1 of 2) ENSGACT00000010817 Dual specificity protein phosphatase 19 (EC 3.1.3.48) (EC 3.1.3.16) (Stress-activated protein kinase pathway-regulating phosphatase 1) (Protein phosphatase SKRP1) (Dual-specificity phosphatase TS-DSP1) (LMW-DSP3). [Source:Uniprot/SWISSPROT;Acc:Q8WTR2]
16.6565 -15.04 0.0000112467 500 4 1 3 [+] picture button
SKAP2 ENSGACT00000011024 Src kinase-associated phosphoprotein 2 (Src family-associated phosphoprotein 2) (Src kinase-associated phosphoprotein 55-related protein) (SKAP55 homolog) (SKAP-HOM) (SKAP-55HOM) (Src-associated adapter protein with PH and SH3 domains) (Pyk2/RAFTK-associa [Source:Uniprot/SWISSPROT;Acc:O75563]
16.8715 -13.03 0.000012213 500 7 2 10 [+] picture button
RGMB ENSGACT00000012915 RGM domain family member B precursor. [Source:Uniprot/SWISSPROT;Acc:Q6NW40]
16.9642 -15.99 0.0000142178 500 4 1 5 [+] picture button
GPS2 ENSGACT00000025640 G protein pathway suppressor 2 (Protein GPS2). [Source:Uniprot/SWISSPROT;Acc:Q13227]
16.8607 -18.99 0.0000160663 500 5 4 13 [+] picture button
PLSCR3 ENSGACT00000025701 Phospholipid scramblase 3 (PL scramblase 3) (Ca(2+)-dependent phospholipid scramblase 3). [Source:Uniprot/SWISSPROT;Acc:Q9NRY6]
16.1459 -18.24 0.0000161956 130 3 2 5 [+] picture button
DDEF2 ENSGACT00000011859 Development and differentiation-enhancing factor 2 (Pyk2 C-terminus- associated protein) (PAP) (Paxillin-associated protein with ARFGAP activity 3) (PAG3). [Source:Uniprot/SWISSPROT;Acc:O43150]
17.8386 -18.42 0.0000162457 500 7 3 10 [+] picture button
USP20 ENSGACT00000021096 Ubiquitin carboxyl-terminal hydrolase 20 (EC 3.1.2.15) (Ubiquitin thioesterase 20) (Ubiquitin-specific-processing protease 20) (Deubiquitinating enzyme 20). [Source:Uniprot/SWISSPROT;Acc:Q9Y2K6]
16.9082 -19.37 0.0000193185 514 3 1 8 [+] picture button
CDKN3 ENSGACT00000015618 Cyclin-dependent kinase inhibitor 3 (EC 3.1.3.48) (EC 3.1.3.16) (CDK2- associated dual-specificity phosphatase) (Kinase-associated phosphatase) (Cyclin-dependent kinase-interacting protein 2) (Cyclin- dependent kinase interactor 1). [Source:Uniprot/SWISSPROT;Acc:Q16667]
16.9789 -15.34 0.0000225271 500 6 1 14 [+] picture button
POLR2I ENSGACT00000008875 DNA-directed RNA polymerase II subunit I (EC 2.7.7.6) (DNA-directed RNA polymerase II 14.5 kDa polypeptide) (RPB9) (RPB14.5). [Source:Uniprot/SWISSPROT;Acc:P36954]
16.7144 -12.58 0.000025702 248 5 1 9 [+] picture button
KCNA1 ENSGACT00000005690 Potassium voltage-gated channel subfamily A member 1 (Voltage-gated potassium channel subunit Kv1.1) (HUKI) (HBK1). [Source:Uniprot/SWISSPROT;Acc:Q09470]
16.7001 -16.3 0.0000262485 500 5 5 5 [+] picture button
APBB1IP ENSGACT00000021711 Amyloid beta A4 precursor protein-binding family B member 1- interacting protein (APBB1-interacting protein 1) (Rap1-GTP- interacting adapter molecule) (RIAM) (Proline-rich EVH1 ligand 1) (PREL-1) (Proline-rich protein 73) (Retinoic acid-responsive prolin [Source:Uniprot/SWISSPROT;Acc:Q7Z5R6]
16.4416 -15.33 0.0000277729 500 4 1 5 [+] picture button
TAS1R1 ENSGACT00000008405 Taste receptor type 1 member 1 precursor (G-protein coupled receptor 70). [Source:Uniprot/SWISSPROT;Acc:Q7RTX1]
16.2267 -18.72 0.0000311806 500 5 2 5 [+] picture button
GPS1 ENSGACT00000005671 COP9 signalosome complex subunit 1 (Signalosome subunit 1) (SGN1) (JAB1-containing signalosome subunit 1) (G protein pathway suppressor 1) (Protein GPS1) (Protein MFH). [Source:Uniprot/SWISSPROT;Acc:Q13098]
15.9185 -19.22 0.000031744 271 4 4 10 [+] picture button
FBXO9 ENSGACT00000008565 F-box only protein 9 (Cross-immune reaction antigen 1) (Renal carcinoma antigen NY-REN-57). [Source:Uniprot/SWISSPROT;Acc:Q9UK97]
16.5184 -13.12 0.0000332089 333 10 4 20 [+] picture button
TNFAIP3 ENSGACT00000013990 Tumor necrosis factor, alpha-induced protein 3 (EC 3.-.-.-) (Putative DNA-binding protein A20) (Zinc finger protein A20). [Source:Uniprot/SWISSPROT;Acc:P21580]
16.3175 -14.56 0.0000353406 500 8 4 9 [+] picture button
UBTF (2 of 2) ENSGACT00000001970 Nucleolar transcription factor 1 (Upstream-binding factor 1) (UBF-1) (Autoantigen NOR-90). [Source:Uniprot/SWISSPROT;Acc:P17480]
17.1692 -11.86 0.000036266 262 4 4 9 [+] picture button
HKDC1 ENSGACT00000021257 hexokinase domain containing 1 [Source:RefSeq_peptide;Acc:NP_079406]
16.2309 -15.59 0.0000370872 500 4 1 4 [+] picture button
ILVBL ENSGACT00000008654 ilvB (bacterial acetolactate synthase)-like isoform 1 [Source:RefSeq_peptide;Acc:NP_006835]
15.9043 -19 0.0000410206 500 4 1 4 [+] picture button
BICC1 ENSGACT00000013301 Protein bicaudal C homolog 1 (Bic-C). [Source:Uniprot/SWISSPROT;Acc:Q9H694]
16.7508 -14.24 0.0000522253 500 8 3 14 [+] picture button

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Download table: GFF TXT
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