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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-17

954 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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DOCK4 ENSGACT00000025068 Dedicator of cytokinesis protein 4. [Source:Uniprot/SWISSPROT;Acc:Q8N1I0]
16.884 -14.77 0.000000000240123 500 4 5 10 [+] picture button
NP_219485.1 ENSGACT00000015355 sarcoma antigen NY-SAR-48 isoform a [Source:RefSeq_peptide;Acc:NP_219485]
17.362 -18.16 0.000000000267245 484 3 7 7 [+] picture button
WEE1 ENSGACT00000012920 Wee1-like protein kinase (EC 2.7.10.2) (Wee1A kinase) (WEE1hu). [Source:Uniprot/SWISSPROT;Acc:P30291]
17.8386 -22.25 0.00000000130531 500 8 3 14 [+] picture button
PTPN4 ENSGACT00000010366 Tyrosine-protein phosphatase non-receptor type 4 (EC 3.1.3.48) (Protein-tyrosine phosphatase MEG1) (PTPase-MEG1) (MEG). [Source:Uniprot/SWISSPROT;Acc:P29074]
17.4727 -20.43 0.00000000144764 500 7 4 15 [+] picture button
PDE3B ENSGACT00000020663 cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B) (CGIPDE1) (CGIP1). [Source:Uniprot/SWISSPROT;Acc:Q13370]
16.7149 -11.06 0.0000000017557 500 9 11 12 [+] picture button
ARHGEF4 ENSGACT00000000134 Rho guanine nucleotide exchange factor 4 (APC-stimulated guanine nucleotide exchange factor) (Asef). [Source:Uniprot/SWISSPROT;Acc:Q9NR80]
18.0535 -16.02 0.00000000363239 500 9 2 18 [+] picture button
MAP3K9 ENSGACT00000016074 Mitogen-activated protein kinase kinase kinase 9 (EC 2.7.11.25) (Mixed lineage kinase 1). [Source:Uniprot/SWISSPROT;Acc:P80192]
16.9194 -10.93 0.00000000462807 500 4 3 7 [+] picture button
ARID4B ENSGACT00000005700 AT-rich interactive domain-containing protein 4B (ARID domain- containing protein 4B) (Histone deacetylase complex subunit SAP180) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Retinoblastoma-binding protein 1-like 1) (Breast c [Source:Uniprot/SWISSPROT;Acc:Q4LE39]
17.3412 -15.12 0.0000000275341 500 5 11 10 [+] picture button
OBFC2A ENSGACT00000003011 oligonucleotide/oligosaccharide-binding fold containing 2A [Source:RefSeq_peptide;Acc:NP_001026886]
17.3698 -13.8 0.0000000417287 500 6 2 9 [+] picture button
CLIP4 ENSGACT00000016988 CAP-Gly domain-containing linker protein 4 (Restin-like protein 2). [Source:Uniprot/SWISSPROT;Acc:Q8N3C7]
17.5162 -16.26 0.0000000460124 500 7 9 18 [+] picture button
PLEKHB2 ENSGACT00000014629 Pleckstrin homology domain-containing family B member 2 (Evectin-2). [Source:Uniprot/SWISSPROT;Acc:Q96CS7]
18.8943 -21.79 0.0000000776104 500 2 2 7 [+] picture button
TBX3 ENSGACT00000022201 T-box transcription factor TBX3 (T-box protein 3). [Source:Uniprot/SWISSPROT;Acc:O15119]
16.7836 -15.83 0.0000000892872 500 4 4 9 [+] picture button
EPHA4 ENSGACT00000000128 Ephrin type-A receptor 4 precursor (EC 2.7.10.1) (Tyrosine-protein kinase receptor SEK) (Receptor protein-tyrosine kinase HEK8). [Source:Uniprot/SWISSPROT;Acc:P54764]
16.614 -10.3 0.000000116385 500 5 10 8 [+] picture button
ZNFX1 ENSGACT00000008013 NFX1-type zinc finger-containing protein 1. [Source:Uniprot/SWISSPROT;Acc:Q9P2E3]
16.4702 -13.96 0.000000167429 500 5 1 10 [+] picture button
GPR6 ENSGACT00000015257 Sphingosine 1-phosphate receptor GPR6 (G-protein coupled receptor 6). [Source:Uniprot/SWISSPROT;Acc:P46095]
17.9375 -18.15 0.000000377466 500 7 9 12 [+] picture button
STYX ENSGACT00000021618 Serine/threonine/tyrosine-interacting protein (Protein tyrosine phosphatase-like protein). [Source:Uniprot/SWISSPROT;Acc:Q8WUJ0]
16.8493 -16.42 0.000000442396 500 12 7 20 [+] picture button
GPR3 ENSGACT00000007659 Probable G-protein coupled receptor 3 (ACCA orphan receptor). [Source:Uniprot/SWISSPROT;Acc:P46089]
17.5162 -21.95 0.000000477065 500 7 4 12 [+] picture button
ALAS2 ENSGACT00000009067 5-aminolevulinate synthase, erythroid-specific, mitochondrial precursor (EC 2.3.1.37) (5-aminolevulinic acid synthase) (Delta- aminolevulinate synthase) (Delta-ALA synthetase) (ALAS-E). [Source:Uniprot/SWISSPROT;Acc:P22557]
20.8077 -32.2 0.00000056946 261 5 3 11 [+] picture button
ENSGACT00000018280 bone morphogenetic protein receptor, type II (serine/threonine kinase) [Source:RefSeq_peptide;Acc:NP_001001465]bone morphogenetic protein receptor, type II (serine/threonine kinase) [Source:RefSeq_peptide;Acc:NP_001001465] BY ORTHOLOGY TO:ENSGALT00000013786
16.7296 -14.07 0.000000594723 500 6 12 8 [+] picture button
ZNF367 ENSGACT00000008912 zinc finger protein 367 [Source:RefSeq_peptide;Acc:NP_710162]
18.569 -24.21 0.00000066397 500 4 4 13 [+] picture button
DENR ENSGACT00000020641 Density-regulated protein (DRP) (Protein DRP1) (Smooth muscle cell- associated protein 3) (SMAP-3). [Source:Uniprot/SWISSPROT;Acc:O43583]
16.7144 -8.6 0.000000751057 280 3 3 8 [+] picture button
OPTN ENSGACT00000025375 Optineurin (Optic neuropathy-inducing protein) (E3-14.7K-interacting protein) (FIP-2) (Huntingtin-interacting protein HYPL) (NEMO-related protein) (Transcription factor IIIA-interacting protein) (TFIIIA- IntP). [Source:Uniprot/SWISSPROT;Acc:Q96CV9]
17.9557 -20.93 0.000000867122 588 6 3 10 [+] picture button
C14orf153 ENSGACT00000006334 Uncharacterized protein C14orf153 precursor. [Source:Uniprot/SWISSPROT;Acc:Q96IL0]
16.6565 -17.78 0.000000939901 500 6 1 9 [+] picture button
SRCRB4D ENSGACT00000026788 scavenger receptor cysteine rich domain containing, group B (4 domains) [Source:RefSeq_peptide;Acc:NP_542782]
17.6237 -15.2 0.00000098335 500 4 4 10 [+] picture button
CNKSR2 (1 of 2) ENSGACT00000026997 Connector enhancer of kinase suppressor of ras 2 (Connector enhancer of KSR2) (CNK2). [Source:Uniprot/SWISSPROT;Acc:Q8WXI2]
19.3767 -21.21 0.00000100311 500 3 4 11 [+] picture button
ARFGAP1 ENSGACT00000000543 ADP-ribosylation factor GTPase-activating protein 1 (ADP-ribosylation factor 1 GTPase-activating protein) (ARF1 GAP) (ARF1-directed GTPase- activating protein) (GAP protein). [Source:Uniprot/SWISSPROT;Acc:Q8N6T3]
16.3342 -13.65 0.00000104214 500 5 4 9 [+] picture button
SC4MOL ENSGACT00000022474 C-4 methylsterol oxidase (EC 1.14.13.72) (Methylsterol monooxygenase). [Source:Uniprot/SWISSPROT;Acc:Q15800]
18.4199 -18.14 0.00000114265 300 3 1 10 [+] picture button
CPEB3 ENSGACT00000003864 Cytoplasmic polyadenylation element-binding protein 3 (CPE-binding protein 3) (CPE-BP3) (hCPEB-3). [Source:Uniprot/SWISSPROT;Acc:Q8NE35]
16.8885 -15.75 0.00000143345 500 4 1 11 [+] picture button
hCG_1642425 ENSGACT00000016924 Homolog of Danio rerio "Mitochondrial glycine cleavage system H protein [Source:IPI;Acc:IPI00511586]"Homolog of Danio rerio "Mitochondrial glycine cleavage system H protein [Source:IPI;Acc:IPI00511586]" BY ORTHOLOGY TO:SINFRUT00000129950
17.624 -19.65 0.00000210233 264 5 2 12 [+] picture button
IRF2BP2 ENSGACT00000005734 interferon regulatory factor 2 binding protein 2 isoform B [Source:RefSeq_peptide;Acc:NP_001070865]
17.511 -21.51 0.00000236808 399 7 9 15 [+] picture button
INOC1 ENSGACT00000017172 Putative DNA helicase INO80 complex homolog 1 (EC 3.6.1.-) (hINO80). [Source:Uniprot/SWISSPROT;Acc:Q9ULG1]
16.2379 -10.58 0.00000248328 500 10 2 14 [+] picture button
WNT9A ENSGACT00000023074 Protein Wnt-9a precursor (Wnt-14). [Source:Uniprot/SWISSPROT;Acc:O14904]
17.1571 -19.47 0.00000272581 500 5 5 10 [+] picture button
SLA ENSGACT00000007895 SRC-like-adapter (Src-like-adapter protein 1) (hSLAP). [Source:Uniprot/SWISSPROT;Acc:Q13239]
18.722 -15.89 0.00000306929 340 4 1 8 [+] picture button
PERQ1 ENSGACT00000026373 PERQ amino acid-rich with GYF domain-containing protein 1 (Grb10- interacting GYF protein 1). [Source:Uniprot/SWISSPROT;Acc:O75420]
16.8432 -13.48 0.00000355901 500 7 3 15 [+] picture button
MSRA ENSGACT00000007973 Peptide methionine sulfoxide reductase (EC 1.8.4.11) (Protein- methionine-S-oxide reductase) (PMSR) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase). [Source:Uniprot/SWISSPROT;Acc:Q9UJ68]
17.3109 -17.48 0.0000040042 664 4 1 7 [+] picture button
SNAI2 ENSGACT00000023739 Zinc finger protein SLUG (Neural crest transcription factor Slug) (Snail homolog 2). [Source:Uniprot/SWISSPROT;Acc:O43623]
18.6458 -18.75 0.0000051047 500 9 4 14 [+] picture button
HS3ST5 ENSGACT00000008390 Heparan sulfate glucosamine 3-O-sulfotransferase 5 (EC 2.8.2.23) (Heparan sulfate D-glucosaminyl 3-O-sulfotransferase 5) (Heparan sulfate 3-O-sulfotransferase 5) (h3-OST-5). [Source:Uniprot/SWISSPROT;Acc:Q8IZT8]
16.6565 -15.3 0.0000054489 500 5 2 10 [+] picture button
CTSB (1 of 2) ENSGACT00000021421 Cathepsin B precursor (EC 3.4.22.1) (Cathepsin B1) (APP secretase) (APPS) [Contains: Cathepsin B light chain; Cathepsin B heavy chain]. [Source:Uniprot/SWISSPROT;Acc:P07858]
16.5851 -17.72 0.00000588642 500 5 1 9 [+] picture button
UBE2W ENSGACT00000003616 Probable ubiquitin-conjugating enzyme E2 W (EC 6.3.2.19) (Ubiquitin- protein ligase W) (Ubiquitin carrier protein W). [Source:Uniprot/SWISSPROT;Acc:Q96B02]
17.5802 -17.38 0.00000595746 500 8 6 17 [+] picture button
MDM2 ENSGACT00000001416 Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-) (p53-binding protein Mdm2) (Oncoprotein Mdm2) (Double minute 2 protein) (Hdm2). [Source:Uniprot/SWISSPROT;Acc:Q00987]
17.3966 -18.49 0.00000654045 104 2 2 9 [+] picture button
DDEF2 ENSGACT00000011859 Development and differentiation-enhancing factor 2 (Pyk2 C-terminus- associated protein) (PAP) (Paxillin-associated protein with ARFGAP activity 3) (PAG3). [Source:Uniprot/SWISSPROT;Acc:O43150]
18.4834 -21.43 0.00000817616 500 7 3 10 [+] picture button
ENSGACT00000010977 Homolog of Gallus gallus "Serine/threonine-protein kinase SNF1-like kinase 2 (EC 2.7.1.37) (Qin- induced kinase). [Source:Uniprot/SWISSPROT;Acc:Q9IA88]"Homolog of Gallus gallus "Serine/threonine-protein kinase SNF1-like kinase 2 (EC 2.7.1.37) (Qin- induced kinase). [Source:Uniprot/SWISSPROT;Acc:Q9IA88]" BY ORTHOLOGY TO:SINFRUT00000149706
18.2369 -22.34 0.00000821423 500 7 3 12 [+] picture button
CBX8 (1 of 2) ENSGACT00000024132 Chromobox protein homolog 8 (Polycomb 3 homolog) (Pc3) (hPc3) (Rectachrome 1). [Source:Uniprot/SWISSPROT;Acc:Q9HC52]
17.4088 -17.25 0.00000890666 500 4 4 9 [+] picture button
PLEKHG5 ENSGACT00000014805 Tumor necrosis factor receptor superfamily member 25 precursor (WSL-1 protein) (Apoptosis-mediating receptor DR3) (Apoptosis-mediating receptor TRAMP) (Death domain receptor 3) (WSL protein) (Apoptosis- inducing receptor AIR) (Apo-3) (Lymphocyte-associate [Source:Uniprot/SWISSPROT;Acc:Q93038]
18.0854 -19.21 0.0000107952 381 8 2 18 [+] picture button
CAMK2N1 ENSGACT00000010326 calcium/calmodulin-dependent protein kinase II inhibitor 1 [Source:RefSeq_peptide;Acc:NP_061054]
18.0914 -19.43 0.0000109268 464 7 1 12 [+] picture button
ANUBL1 ENSGACT00000010290 AN1-type zinc finger and ubiquitin domain-containing protein 1 (AN1- type zinc finger protein 4). [Source:Uniprot/SWISSPROT;Acc:Q86XD8]
16.2509 -9.3 0.0000117024 450 8 3 19 [+] picture button
USP46 ENSGACT00000018813 Ubiquitin carboxyl-terminal hydrolase 46 (EC 3.1.2.15) (Ubiquitin thioesterase 46) (Ubiquitin-specific-processing protease 46) (Deubiquitinating enzyme 46). [Source:Uniprot/SWISSPROT;Acc:P62068]
17.8664 -25.01 0.0000125711 500 6 2 10 [+] picture button
RASL11B ENSGACT00000018820 RAS-like family 11 member B [Source:RefSeq_peptide;Acc:NP_076429]
17.377 -16.48 0.0000125868 500 6 3 13 [+] picture button
CAP2 ENSGACT00000007124 Adenylyl cyclase-associated protein 2 (CAP 2). [Source:Uniprot/SWISSPROT;Acc:P40123]
17.5103 -17.06 0.0000131476 293 9 3 16 [+] picture button
TCEA2 ENSGACT00000013903 Transcription elongation factor A protein 2 (Transcription elongation factor S-II protein 2) (Testis-specific S-II) (Transcription elongation factor TFIIS.l). [Source:Uniprot/SWISSPROT;Acc:Q15560]
16.2727 -14.05 0.0000135525 500 3 1 4 [+] picture button

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Download table: GFF TXT
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