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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-152

838 hits found.


Page 1 of 17
1 2 3 4 5 6 7 8 9 10 11 .. 17 next >>

Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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MEOX2 ENSGACT00000016872 Homeobox protein MOX-2 (Mesenchyme homeobox 2) (Growth arrest-specific homeobox). [Source:Uniprot/SWISSPROT;Acc:P50222]
17.7894 -16.69 8.89463e-09 500 5 10 11 [+] picture button
LRP2 ENSGACT00000006970 Low-density lipoprotein receptor-related protein 2 precursor (Megalin) (Glycoprotein 330) (gp330). [Source:Uniprot/SWISSPROT;Acc:P98164]
16.3625 -13.75 1.28946e-07 500 8 14 13 [+] picture button
NIPA2 ENSGACT00000018260 Non-imprinted in Prader-Willi/Angelman syndrome region protein 2. [Source:Uniprot/SWISSPROT;Acc:Q8N8Q9]
16.4896 -15.38 1.30667e-07 472 8 10 9 [+] picture button
DYNLL2 ENSGACT00000014703 Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2). [Source:Uniprot/SWISSPROT;Acc:Q96FJ2]
16.7532 -17.07 1.84863e-07 503 7 10 9 [+] picture button
CCDC85B ENSGACT00000022578 Delta-interacting protein A (Hepatitis delta antigen-interacting protein A) (Coiled-coil domain-containing protein 85B). [Source:Uniprot/SWISSPROT;Acc:Q15834]
19.1569 -16.84 3.72462e-07 500 10 4 17 [+] picture button
UNC45A ENSGACT00000015258 UNC45 homolog A (UNC-45A) (Smooth muscle cell-associated protein 1) (SMAP-1). [Source:Uniprot/SWISSPROT;Acc:Q9H3U1]
17.9461 -19.37 5.93466e-07 500 7 3 9 [+] picture button
FAM54A ENSGACT00000014673 Protein FAM54A (DUF729 domain-containing protein 1). [Source:Uniprot/SWISSPROT;Acc:Q6P444]
17.3972 -17.11 6.0398e-07 500 4 3 5 [+] picture button
CYLD ENSGACT00000022101 Probable ubiquitin carboxyl-terminal hydrolase CYLD (EC 3.1.2.15) (Ubiquitin thioesterase CYLD) (Ubiquitin-specific-processing protease CYLD) (Deubiquitinating enzyme CYLD). [Source:Uniprot/SWISSPROT;Acc:Q9NQC7]
16.2912 -13.36 6.40193e-07 500 4 2 8 [+] picture button
USP47 ENSGACT00000020802 Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.1.2.15) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47) (Deubiquitinating enzyme 47). [Source:Uniprot/SWISSPROT;Acc:Q96K76]
16.6565 -19.85 1.12914e-06 500 10 10 17 [+] picture button
LIN7C ENSGACT00000020488 Lin-7 homolog C (Lin-7C) (Mammalian lin-seven protein 3) (MALS-3) (Vertebrate lin-7 homolog 3) (Veli-3 protein). [Source:Uniprot/SWISSPROT;Acc:Q9NUP9]
15.9739 -15.78 3.6143e-06 500 8 5 16 [+] picture button
DGKE ENSGACT00000024126 Diacylglycerol kinase epsilon (EC 2.7.1.107) (Diglyceride kinase epsilon) (DGK-epsilon) (DAG kinase epsilon). [Source:Uniprot/SWISSPROT;Acc:P52429]
16.3342 -13.7 4.1193e-06 500 5 1 8 [+] picture button
ST18 ENSGACT00000023757 Suppression of tumorigenicity protein 18 (Zinc finger protein 387). [Source:Uniprot/SWISSPROT;Acc:O60284]
15.8961 -13.67 4.64762e-06 500 6 4 8 [+] picture button
ARHGAP26 ENSGACT00000027454 Rho GTPase-activating protein 26 (Oligophrenin-1-like protein) (GTPase regulator associated with focal adhesion kinase). [Source:Uniprot/SWISSPROT;Acc:Q9UNA1]
15.9043 -13.36 7.76263e-06 500 8 3 12 [+] picture button
ENSGACT00000004528 Apolipoprotein E2. [Source:Uniprot/SPTREMBL;Acc:Q5KST8]Apolipoprotein E2. [Source:Uniprot/SPTREMBL;Acc:Q5KST8] BY ORTHOLOGY TO:SINFRUT00000147954
16.1579 -15.78 9.93456e-06 500 3 4 4 [+] picture button
COL6A2 (1 of 2) ENSGACT00000008126 Collagen alpha-2(VI) chain precursor. [Source:Uniprot/SWISSPROT;Acc:P12110]
19.6996 -23.06 1.02718e-05 500 4 3 9 [+] picture button
TBX3 ENSGACT00000022201 T-box transcription factor TBX3 (T-box protein 3). [Source:Uniprot/SWISSPROT;Acc:O15119]
16.0256 -15.74 1.05624e-05 500 4 4 9 [+] picture button
EMILIN3 ENSGACT00000015978 EMILIN-3 precursor (EMILIN-5) (Elastin microfibril interface-located protein 5) (Elastin microfibril interfacer 5). [Source:Uniprot/SWISSPROT;Acc:Q9NT22]
17.8664 -21.77 1.1839e-05 500 6 4 9 [+] picture button
VPS18 ENSGACT00000017182 Vacuolar protein sorting-associated protein 18 homolog (hVPS18). [Source:Uniprot/SWISSPROT;Acc:Q9P253]
17.8774 -15.21 1.22963e-05 500 7 2 11 [+] picture button
IMPDH2 ENSGACT00000007588 Inosine-5'-monophosphate dehydrogenase 2 (EC 1.1.1.205) (IMP dehydrogenase 2) (IMPDH-II) (IMPD 2). [Source:Uniprot/SWISSPROT;Acc:P12268]
16.1276 -14.54 1.27255e-05 343 7 5 11 [+] picture button
COL4A1 ENSGACT00000004675 Collagen alpha-1(IV) chain precursor (Arresten). [Source:Uniprot/SWISSPROT;Acc:P02462]
16.764 -17.55 1.66575e-05 500 3 4 4 [+] picture button
LSM4 ENSGACT00000010820 U6 snRNA-associated Sm-like protein LSm4 (Glycine-rich protein) (GRP). [Source:Uniprot/SWISSPROT;Acc:Q9Y4Z0]
16.0124 -15.95 2.2586e-05 733 4 1 5 [+] picture button
ZNF710 (1 of 2) ENSGACT00000014348 Zinc finger protein 710. [Source:Uniprot/SWISSPROT;Acc:Q8N1W2]
16.4702 -15.82 2.25933e-05 500 3 4 3 [+] picture button
TTLL1 ENSGACT00000026288 Probable tubulin polyglutamylase (EC 6.-.-.-) (Tubulin polyglutamylase complex subunit 3) (PGs3) (Tubulin--tyrosine ligase-like protein 1). [Source:Uniprot/SWISSPROT;Acc:O95922]
16.3342 -12.8 2.55083e-05 500 10 1 17 [+] picture button
SPATS2 ENSGACT00000014211 spermatogenesis associated, serine-rich 2 [Source:RefSeq_peptide;Acc:NP_075559]
16.5332 -15.43 2.82217e-05 500 6 2 8 [+] picture button
DDOST ENSGACT00000006990 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit precursor (EC 2.4.1.119) (Oligosaccharyl transferase 48 kDa subunit) (DDOST 48 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:P39656]
17.1968 -16 2.8827e-05 479 5 3 7 [+] picture button
SESN2 ENSGACT00000007623 Sestrin-2 (Hi95). [Source:Uniprot/SWISSPROT;Acc:P58004]
17.584 -17.13 2.91987e-05 400 7 3 18 [+] picture button
ITGA11 (1 of 2) ENSGACT00000022429 Integrin alpha-11 precursor. [Source:Uniprot/SWISSPROT;Acc:Q9UKX5]
17.4776 -19.27 2.93288e-05 500 3 3 4 [+] picture button
ENSGACT00000005285 Homolog of Homo sapiens "GTPase, IMAP family member 4 [Source:IPI;Acc:IPI00019563]"Homolog of Homo sapiens "GTPase, IMAP family member 4 [Source:IPI;Acc:IPI00019563]" BY ORTHOLOGY TO:SINFRUT00000178245
17.3013 -12.79 3.23579e-05 500 3 1 4 [+] picture button
EBI2 ENSGACT00000002459 EBV-induced G-protein coupled receptor 2 (EBI2). [Source:Uniprot/SWISSPROT;Acc:P32249]
17.5162 -20.19 3.27064e-05 500 8 1 10 [+] picture button
CRELD1 (1 of 2) ENSGACT00000000110 Cysteine-rich with EGF-like domain protein 1 precursor. [Source:Uniprot/SWISSPROT;Acc:Q96HD1]
16.4774 -17.35 3.42384e-05 500 9 3 11 [+] picture button
TMEM63B (2 of 2) ENSGACT00000006645 Transmembrane protein 63B. [Source:Uniprot/SWISSPROT;Acc:Q5T3F8]
16.3951 -16.07 3.4519e-05 500 3 4 4 [+] picture button
DEPDC1B ENSGACT00000007328 DEP domain-containing protein 1B (HBxAg-transactivated protein 8). [Source:Uniprot/SWISSPROT;Acc:Q8WUY9]
18.5909 -17.07 3.50769e-05 500 9 4 14 [+] picture button
RNUXA ENSGACT00000025746 RNA U small nuclear RNA export adapter protein (Phosphorylated adapter RNA export protein). [Source:Uniprot/SWISSPROT;Acc:Q9H814]
16.1959 -13.97 3.50964e-05 706 5 1 5 [+] picture button
ZYX ENSGACT00000013689 Zyxin (Zyxin-2). [Source:Uniprot/SWISSPROT;Acc:Q15942]
17.0309 -17.45 3.59579e-05 500 4 4 7 [+] picture button
IGF2BP2 ENSGACT00000008004 Insulin-like growth factor 2 mRNA-binding protein 2 (IGF2 mRNA-binding protein 2) (IGF-II mRNA-binding protein 2) (IMP-2) (Hepatocellular carcinoma autoantigen p62) (VICKZ family member 2). [Source:Uniprot/SWISSPROT;Acc:Q9Y6M1]
16.8266 -16.57 3.7783e-05 500 6 10 10 [+] picture button
LASS6 ENSGACT00000007081 LAG1 longevity assurance homolog 6. [Source:Uniprot/SWISSPROT;Acc:Q6ZMG9]
15.9894 -12.17 3.84121e-05 500 6 2 9 [+] picture button
LRRN1 (1 of 2) ENSGACT00000015791 Leucine-rich repeat neuronal protein 1 precursor (Neuronal leucine- rich repeat protein 1) (NLRR-1). [Source:Uniprot/SWISSPROT;Acc:Q6UXK5]
18.9635 -26.01 3.85604e-05 500 9 7 14 [+] picture button
MIF ENSGACT00000023656 Macrophage migration inhibitory factor (MIF) (Phenylpyruvate tautomerase) (EC 5.3.2.1) (Glycosylation-inhibiting factor) (GIF). [Source:Uniprot/SWISSPROT;Acc:P14174]
18.6231 -16.31 4.23984e-05 500 5 3 12 [+] picture button
CYR61 ENSGACT00000008888 Protein CYR61 precursor (Cysteine-rich, angiogenic inducer, 61) (Insulin-like growth factor-binding protein 10) (Protein GIG1). [Source:Uniprot/SWISSPROT;Acc:O00622]
15.9043 -13.95 4.55151e-05 500 7 6 10 [+] picture button
BAI3 ENSGACT00000007998 Brain-specific angiogenesis inhibitor 3 precursor. [Source:Uniprot/SWISSPROT;Acc:O60242]
19.4503 -20.58 4.59006e-05 500 6 10 11 [+] picture button
MTF1 ENSGACT00000018359 Metal-regulatory transcription factor 1 (Transcription factor MTF-1) (MRE-binding transcription factor). [Source:Uniprot/SWISSPROT;Acc:Q14872]
16.4568 -15.24 5.06244e-05 500 4 3 5 [+] picture button
PLA2R1 ENSGACT00000020062 phospholipase A2 receptor 1 isoform 1 precursor [Source:RefSeq_peptide;Acc:NP_031392]
17.0347 -21.8 5.16843e-05 500 3 2 4 [+] picture button
FGF10 (2 of 2) ENSGACT00000022877 Fibroblast growth factor 10 precursor (FGF-10) (Keratinocyte growth factor 2). [Source:Uniprot/SWISSPROT;Acc:O15520]
17.4088 -20.81 5.18073e-05 500 4 3 6 [+] picture button
ENSGACT00000013887 Homolog of Danio rerio "Tubulin, beta, 2 [Source:IPI;Acc:IPI00500040]"Homolog of Danio rerio "Tubulin, beta, 2 [Source:IPI;Acc:IPI00500040]" BY ORTHOLOGY TO:SINFRUT00000135523
17.6237 -20.36 5.70874e-05 500 6 4 9 [+] picture button
APC2 ENSGACT00000004345 adenomatosis polyposis coli 2 [Source:RefSeq_peptide;Acc:NP_005874]
16.8266 -18.57 5.83734e-05 500 4 2 6 [+] picture button
NOSTRIN ENSGACT00000007049 nitric oxide synthase trafficking isoform 2 [Source:RefSeq_peptide;Acc:NP_001034813]
17.3006 -16.91 5.99952e-05 315 3 1 7 [+] picture button
VEGFC ENSGACT00000021675 Vascular endothelial growth factor C precursor (VEGF-C) (Vascular endothelial growth factor-related protein) (VRP) (Flt4 ligand) (Flt4- L). [Source:Uniprot/SWISSPROT;Acc:P49767]
16.1903 -18 6.61924e-05 500 4 8 8 [+] picture button
ENSGACT00000010523 Putative tenascin X. [Source:Uniprot/SPTREMBL;Acc:Q7SZG1]Putative tenascin X. [Source:Uniprot/SPTREMBL;Acc:Q7SZG1] BY ORTHOLOGY TO:SINFRUT00000138233
16.5946 -17.2 7.63501e-05 383 6 4 10 [+] picture button
TMEM30A (2 of 2) ENSGACT00000009131 Cell cycle control protein 50A (Transmembrane protein 30A). [Source:Uniprot/SWISSPROT;Acc:Q9NV96]
17.1939 -20.43 7.8008e-05 500 4 2 9 [+] picture button
ATPAF2 ENSGACT00000012266 ATP synthase mitochondrial F1 complex assembly factor 2, mitochondrial precursor (ATP12 homolog). [Source:Uniprot/SWISSPROT;Acc:Q8N5M1]
16.2129 -16.58 7.81784e-05 654 5 2 8 [+] picture button

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Download table: GFF TXT
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