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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-140

772 hits found.


Page 1 of 16
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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C15orf29 ENSGACT00000010497 Uncharacterized protein C15orf29. [Source:Uniprot/SWISSPROT;Acc:Q9H079]
16.4813 -17.2 0.000000025194 552 8 5 10 [+] picture button
LMX1B (1 of 2) ENSGACT00000015925 LIM homeobox transcription factor 1 beta (LIM/homeobox protein LMX1B) (LIM/homeobox protein 1.2) (LMX-1.2). [Source:Uniprot/SWISSPROT;Acc:O60663]
17.9461 -18.71 0.000000752725 500 4 4 10 [+] picture button
LPHN2 (2 of 2) ENSGACT00000023631 Latrophilin-2 precursor (Calcium-independent alpha-latrotoxin receptor 2) (Latrophilin homolog 1) (Lectomedin-1). [Source:Uniprot/SWISSPROT;Acc:O95490]
16.642 -13.53 0.00000143743 500 3 2 3 [+] picture button
ERBB2IP ENSGACT00000021003 Protein LAP2 (Erbb2-interacting protein) (Erbin) (Densin-180-like protein). [Source:Uniprot/SWISSPROT;Acc:Q96RT1]
17.1694 -18.2 0.00000296188 500 5 6 5 [+] picture button
SHC1 ENSGACT00000016013 SHC-transforming protein 1 (SH2 domain protein C1) (Src homology 2 domain-containing-transforming protein C1). [Source:Uniprot/SWISSPROT;Acc:P29353]
17.2674 -14.46 0.00000340519 500 7 4 8 [+] picture button
RAB21 ENSGACT00000000532 Ras-related protein Rab-21. [Source:Uniprot/SWISSPROT;Acc:Q9UL25]
16.5494 -17.29 0.00000491785 500 6 2 8 [+] picture button
FGF8 (2 of 2) ENSGACT00000024207 Fibroblast growth factor 8 precursor (FGF-8) (HBGF-8) (Androgen- induced growth factor) (AIGF). [Source:Uniprot/SWISSPROT;Acc:P55075]
16.3342 -17.15 0.00000507526 500 5 3 5 [+] picture button
TNFAIP8L2 ENSGACT00000017961 tumor necrosis factor, alpha-induced protein 8-like 2 [Source:RefSeq_peptide;Acc:NP_078851]
16.7144 -16.21 0.00000569766 260 3 1 9 [+] picture button
NCAPH ENSGACT00000018020 Condensin complex subunit 2 (Non-SMC condensin I complex subunit H) (Barren homolog protein 1) (Chromosome-associated protein H) (hCAP-H) (XCAP-H homolog). [Source:Uniprot/SWISSPROT;Acc:Q15003]
16.487 -12.18 0.00000870635 223 7 4 11 [+] picture button
STYXL1 ENSGACT00000013554 Serine/threonine/tyrosine-interacting-like protein 1 (Dual specificity protein phosphatase 24) (Map kinase phosphatase-like protein MK-STYX) (Dual specificity phosphatase inhibitor MK-STYX). [Source:Uniprot/SWISSPROT;Acc:Q9Y6J8]
16.4702 -20.34 0.0000171654 500 7 1 6 [+] picture button
ORC1L ENSGACT00000007211 Origin recognition complex subunit 1 (Replication control protein 1). [Source:Uniprot/SWISSPROT;Acc:Q13415]
16.487 -9.68 0.0000208789 195 3 1 5 [+] picture button
GRB14 ENSGACT00000007265 Growth factor receptor-bound protein 14 (GRB14 adapter protein). [Source:Uniprot/SWISSPROT;Acc:Q14449]
17.1939 -22.32 0.0000211414 500 5 2 5 [+] picture button
ADRA1B ENSGACT00000024013 Alpha-1B adrenergic receptor (Alpha 1B-adrenoceptor) (Alpha 1B- adrenoreceptor). [Source:Uniprot/SWISSPROT;Acc:P35368]
16.2267 -19.06 0.0000290494 500 4 2 6 [+] picture button
ENSGACT00000011403 SAR1a gene homolog 1 [Source:RefSeq_peptide;Acc:NP_001007740]SAR1a gene homolog 1 [Source:RefSeq_peptide;Acc:NP_001007740] BY ORTHOLOGY TO:ENSRNOT00000000673
16.1459 -12 0.0000294872 174 4 1 5 [+] picture button
EMILIN1 ENSGACT00000005968 EMILIN-1 precursor (Elastin microfibril interface-located protein 1) (Elastin microfibril interfacer 1). [Source:Uniprot/SWISSPROT;Acc:Q9Y6C2]
17.1161 -21.86 0.0000297018 500 4 1 3 [+] picture button
LSG1 ENSGACT00000012327 large subunit GTPase 1 homolog [Source:RefSeq_peptide;Acc:NP_060855]
17.0555 -18.82 0.0000323942 294 5 1 11 [+] picture button
JMJD1B ENSGACT00000024005 JmjC domain-containing histone demethylation protein 2B (EC 1.14.11.-) (Jumonji domain-containing protein 1B) (Nuclear protein 5qNCA). [Source:Uniprot/SWISSPROT;Acc:Q7LBC6]
16.4416 -14.99 0.0000358785 500 3 2 3 [+] picture button
MMACHC ENSGACT00000019260 Methylmalonic aciduria and homocystinuria type C protein. [Source:Uniprot/SWISSPROT;Acc:Q9Y4U1]
16.1192 -13.86 0.0000372632 500 4 1 8 [+] picture button
SLC16A3 (2 of 2) ENSGACT00000007151 Monocarboxylate transporter 4 (MCT 4) (MCT 3) (Solute carrier family 16 member 3). [Source:Uniprot/SWISSPROT;Acc:O15427]
17.1939 -18.63 0.0000389802 500 5 1 6 [+] picture button
DNAJA1 ENSGACT00000023678 DnaJ homolog subfamily A member 1 (Heat shock 40 kDa protein 4) (DnaJ protein homolog 2) (HSJ-2) (HSDJ). [Source:Uniprot/SWISSPROT;Acc:P31689]
16.1459 -12 0.0000429748 93 4 2 7 [+] picture button
EFHA1 ENSGACT00000026689 EF-hand domain-containing family member A1. [Source:Uniprot/SWISSPROT;Acc:Q8IYU8]
16.4005 -16.29 0.0000507376 355 7 1 12 [+] picture button
ATP9B ENSGACT00000003339 Probable phospholipid-transporting ATPase IIB (EC 3.6.3.1). [Source:Uniprot/SWISSPROT;Acc:O43861]
17.0576 -19.55 0.0000602441 500 4 2 10 [+] picture button
RGS18 ENSGACT00000021309 Regulator of G-protein signaling 18 (RGS18). [Source:Uniprot/SWISSPROT;Acc:Q9NS28]
16.8281 -11.87 0.0000629723 194 3 2 5 [+] picture button
EXTL3 ENSGACT00000011133 Exostosin-like 3 (EC 2.4.1.223) (Glucuronyl-galactosyl-proteoglycan 4- alpha-N-acetylglucosaminyltransferase) (Putative tumor suppressor protein EXTL3) (Multiple exostosis-like protein 3) (Hereditary multiple exostoses gene isolog) (EXT-related protein 1) [Source:Uniprot/SWISSPROT;Acc:O43909]
16.3092 -23.07 0.000066985 500 5 3 6 [+] picture button
SLC19A1 ENSGACT00000019165 Folate transporter 1 (Solute carrier family 19 member 1) (Placental folate transporter) (FOLT) (Reduced folate carrier protein) (RFC) (Intestinal folate carrier) (IFC-1). [Source:Uniprot/SWISSPROT;Acc:P41440]
15.9708 -14.85 0.0000772744 500 4 1 4 [+] picture button
MPP3 (2 of 2) ENSGACT00000009169 MAGUK p55 subfamily member 3 (Protein MPP3) (Discs large homolog 3). [Source:Uniprot/SWISSPROT;Acc:Q13368]
16.764 -19.11 0.0000800707 500 5 2 5 [+] picture button
C1orf93 ENSGACT00000010001 Uncharacterized protein C1orf93. [Source:Uniprot/SWISSPROT;Acc:Q8TBF2]
16.4416 -15.72 0.0000817532 500 7 2 9 [+] picture button
ENSGACT00000000710 Homolog of Homo sapiens "MGC99813 protein [Source:IPI;Acc:IPI00164776]"Homolog of Homo sapiens "MGC99813 protein [Source:IPI;Acc:IPI00164776]" BY ORTHOLOGY TO:SINFRUT00000137978
16.2549 -12.25 0.0000840765 500 4 4 6 [+] picture button
ENSGACT00000006017 Homolog of Homo sapiens "Guanine nucleotide-binding protein, alpha-13 subunit [Source:IPI;Acc:IPI00290928]"Homolog of Homo sapiens "Guanine nucleotide-binding protein, alpha-13 subunit [Source:IPI;Acc:IPI00290928]" BY ORTHOLOGY TO:SINFRUT00000176994
16.3733 -16.68 0.0000848219 500 7 3 9 [+] picture button
DAB2IP ENSGACT00000021045 Disabled homolog 2-interacting protein (DAB2-interacting protein) (DAB2 interaction protein) (ASK-interacting protein 1). [Source:Uniprot/SWISSPROT;Acc:Q5VWQ8]
17.4088 -16.92 0.0000879458 500 4 1 5 [+] picture button
ENSGACT00000007325 Homolog of Brachydanio rerio "Beta-3-galactosyltransferase. [Source:Uniprot/SPTREMBL;Acc:Q6DHV1]"Homolog of Brachydanio rerio "Beta-3-galactosyltransferase. [Source:Uniprot/SPTREMBL;Acc:Q6DHV1]" BY ORTHOLOGY TO:SINFRUT00000161478
18.4834 -20.48 0.0000942327 500 4 1 4 [+] picture button
AGPS ENSGACT00000005898 Alkyldihydroxyacetonephosphate synthase, peroxisomal precursor (EC 2.5.1.26) (Alkyl-DHAP synthase) (Alkylglycerone-phosphate synthase) (Aging-associated gene 5 protein). [Source:Uniprot/SWISSPROT;Acc:O00116]
15.9894 -9.91 0.0000984371 500 6 3 11 [+] picture button
REEP1 ENSGACT00000010943 Receptor expression-enhancing protein 1. [Source:Uniprot/SWISSPROT;Acc:Q9H902]
16.9306 -17.02 0.0000991643 500 4 1 5 [+] picture button
BIRC6 ENSGACT00000002908 Baculoviral IAP repeat-containing protein 6 (Ubiquitin-conjugating BIR domain enzyme apollon). [Source:Uniprot/SWISSPROT;Acc:Q9NR09]
17.4727 -17.06 0.000099892 500 4 9 5 [+] picture button
ENSGACT00000004618 Homolog of Homo sapiens "CRB1 isoform II precursor [Source:IPI;Acc:IPI00397504]"Homolog of Homo sapiens "CRB1 isoform II precursor [Source:IPI;Acc:IPI00397504]" BY ORTHOLOGY TO:SINFRUT00000158964
16.9789 -24.42 0.000116259 500 3 1 3 [+] picture button
Q9H994_HUMAN ENSGACT00000027658 CDNA FLJ12906 fis, clone NT2RP2004373. [Source:Uniprot/SPTREMBL;Acc:Q9H994]
17.5543 -15.88 0.000120615 500 5 3 7 [+] picture button
NDUFA12L ENSGACT00000009453 Mimitin, mitochondrial precursor (Myc-induced mitochondrial protein) (MMTN) (B17.2-like) (B17.2L) (NDUFA12-like protein). [Source:Uniprot/SWISSPROT;Acc:Q8N183]
16.7144 -21.24 0.000123271 273 3 1 5 [+] picture button
KIAA0280 ENSGACT00000010860 Uncharacterized protein KIAA0280. [Source:Uniprot/SWISSPROT;Acc:Q92567]
16.1912 -12.03 0.000138358 500 5 2 8 [+] picture button
SRRM1 ENSGACT00000009651 Serine/arginine repetitive matrix protein 1 (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160). [Source:Uniprot/SWISSPROT;Acc:Q8IYB3]
17.0847 -16.69 0.000139408 500 4 1 4 [+] picture button
NCSTN ENSGACT00000023496 Nicastrin precursor. [Source:Uniprot/SWISSPROT;Acc:Q92542]
15.9637 -17.56 0.000150574 500 8 2 8 [+] picture button
PDE7A ENSGACT00000003912 High-affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A (EC 3.1.4.17) (HCP1) (TM22). [Source:Uniprot/SWISSPROT;Acc:Q13946]
17.2008 -16.68 0.000158216 500 7 3 9 [+] picture button
TTK ENSGACT00000006951 Dual specificity protein kinase TTK (EC 2.7.12.1) (Phosphotyrosine picked threonine-protein kinase) (PYT). [Source:Uniprot/SWISSPROT;Acc:P33981]
15.9185 -12 0.000165502 156 6 2 10 [+] picture button
YWHAG (2 of 2) ENSGACT00000014905 14-3-3 protein gamma (Protein kinase C inhibitor protein 1) (KCIP-1). [Source:Uniprot/SWISSPROT;Acc:P61981]
18.291 -18.99 0.000168954 500 5 8 5 [+] picture button
ECE1 ENSGACT00000006086 Endothelin-converting enzyme 1 (EC 3.4.24.71) (ECE-1). [Source:Uniprot/SWISSPROT;Acc:P42892]
17.3013 -17.85 0.000169253 500 5 3 5 [+] picture button
ARL11 ENSGACT00000020343 ADP-ribosylation factor-like protein 11 (ADP-ribosylation factor-like tumor suppressor protein 1). [Source:Uniprot/SWISSPROT;Acc:Q969Q4]
16.2267 -18.13 0.000185737 500 5 1 6 [+] picture button
ENSGACT00000013306 Homolog of Homo sapiens "Homeobox protein [Source:IPI;Acc:IPI00030354]"Homolog of Homo sapiens "Homeobox protein [Source:IPI;Acc:IPI00030354]" BY ORTHOLOGY TO:SINFRUT00000157884
16.5441 -12.27 0.000207611 500 6 1 8 [+] picture button
RDH10 ENSGACT00000003627 retinol dehydrogenase 10 [Source:RefSeq_peptide;Acc:NP_742034]
17.4727 -18.44 0.000227037 500 8 5 14 [+] picture button
DNAJC3 ENSGACT00000005520 DnaJ homolog subfamily C member 3 (Interferon-induced, double-stranded RNA-activated protein kinase inhibitor) (Protein kinase inhibitor p58) (Protein kinase inhibitor of 58 kDa). [Source:Uniprot/SWISSPROT;Acc:Q13217]
16.6955 -21.71 0.000234287 303 7 2 9 [+] picture button
NP_671727.1 ENSGACT00000015969 conserved hypothetical proteinconserved hypothetical protein BY ORTHOLOGY TO:AAEL006059-RA
16.7144 -17.62 0.000238104 206 6 2 9 [+] picture button
GEMIN6 ENSGACT00000007011 Gem-associated protein 6 (Gemin-6) (SIP2). [Source:Uniprot/SWISSPROT;Acc:Q8WXD5]
16.3519 -11.39 0.000247808 500 7 1 8 [+] picture button

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Download table: GFF TXT
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