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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-138

810 hits found.


Page 1 of 17
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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RQCD1 ENSGACT00000003354 RCD1 required for cell differentiation1 homolog [Source:RefSeq_peptide;Acc:NP_005435]
16.081 -19.59 0.00000000358632 352 7 7 7 [+] picture button
C20orf67 ENSGACT00000004370 Phosphorylated CTD-interacting factor 1. [Source:Uniprot/SWISSPROT;Acc:Q9H4Z3]
16.7719 -16.82 0.000000404379 500 2 2 2 [+] picture button
JMJD1C ENSGACT00000020305 Probable JmjC domain-containing histone demethylation protein 2C (EC 1.14.11.-) (Jumonji domain-containing protein 1C) (Thyroid receptor-interacting protein 8) (TRIP-8). [Source:Uniprot/SWISSPROT;Acc:Q15652]
16.5851 -23.05 0.00000095603 500 5 1 4 [+] picture button
NMNAT2 ENSGACT00000002179 Nicotinamide mononucleotide adenylyltransferase 2 (EC 2.7.7.1) (NMN adenylyltransferase 2). [Source:Uniprot/SWISSPROT;Acc:Q9BZQ4]
16.6792 -14.88 0.000001 500 11 1 6 [+] picture button
TGS1 ENSGACT00000019482 Trimethylguanosine synthase homolog (EC 2.1.1.-) (Nuclear receptor coactivator 6-interacting protein) (PRIP-interacting protein with methyltransferase motif) (PIPMT) (PIMT) (CLL-associated antigen KW-2) (Hepatocellular carcinoma-associated antigen 137). [Source:Uniprot/SWISSPROT;Acc:Q96RS0]
16.3342 -20.5 0.000001 500 15 1 4 [+] picture button
PLA2G3 (2 of 2) ENSGACT00000020565 Group 3 secretory phospholipase A2 precursor (EC 3.1.1.4) (Group III secretory phospholipase A2) (Phosphatidylcholine 2-acylhydrolase GIII) (GIII sPLA2). [Source:Uniprot/SWISSPROT;Acc:Q9NZ20]
17.6107 -21.7 0.000001 500 7 1 5 [+] picture button
ENSGACT00000003084 NOT ANNOTATED
17.0084 -28.53 0.000001 500 9 1 6 [+] picture button
PLA2G3 (2 of 2) ENSGACT00000020568 Group 3 secretory phospholipase A2 precursor (EC 3.1.1.4) (Group III secretory phospholipase A2) (Phosphatidylcholine 2-acylhydrolase GIII) (GIII sPLA2). [Source:Uniprot/SWISSPROT;Acc:Q9NZ20]
16.811 -16.7 0.000001 500 5 1 4 [+] picture button
SENP1 ENSGACT00000012340 Sentrin-specific protease 1 (EC 3.4.22.-) (Sentrin/SUMO-specific protease SENP1). [Source:Uniprot/SWISSPROT;Acc:Q9P0U3]
16.5491 -17.81 0.00000611258 500 7 3 9 [+] picture button
NUP188 ENSGACT00000021224 nucleoporin 188kDa [Source:RefSeq_peptide;Acc:NP_056169]
16.7027 -21.12 0.0000082029 467 6 4 8 [+] picture button
BEST2 ENSGACT00000025297 Bestrophin-2 (Vitelliform macular dystrophy 2-like protein 1). [Source:Uniprot/SWISSPROT;Acc:Q8NFU1]
16.2267 -18.08 0.0000115171 500 2 2 3 [+] picture button
NP_776154.2 ENSGACT00000005241 Hypothetical protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q0P3X7]Hypothetical protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q0P3X7] BY ORTHOLOGY TO:ENSDART00000101135
16.384 -19.94 0.0000240943 337 5 2 7 [+] picture button
DENND1A ENSGACT00000024243 DENN domain-containing protein 1A. [Source:Uniprot/SWISSPROT;Acc:Q8TEH3]
16.1686 -18.25 0.0000248101 500 4 2 4 [+] picture button
UNK ENSGACT00000006753 Zinc finger CCCH domain-containing protein 5. [Source:Uniprot/SWISSPROT;Acc:Q9C0B0]
18.9132 -31.36 0.0000281475 500 3 3 3 [+] picture button
SOX5 ENSGACT00000025274 Transcription factor SOX-5. [Source:Uniprot/SWISSPROT;Acc:P35711]
16.8151 -21.74 0.000032562 500 4 10 6 [+] picture button
DHRS3 ENSGACT00000005934 Short-chain dehydrogenase/reductase 3 (EC 1.1.-.-) (Retinal short- chain dehydrogenase/reductase 1) (retSDR1) (DD83.1). [Source:Uniprot/SWISSPROT;Acc:O75911]
16.5491 -20.92 0.0000329253 500 4 1 5 [+] picture button
LSM14A ENSGACT00000010285 LSM14 protein homolog A (Protein SCD6 homolog) (Protein FAM61A) (Putative alpha synuclein-binding protein) (AlphaSNBP). [Source:Uniprot/SWISSPROT;Acc:Q8ND56]
16.3733 -14.99 0.0000338394 122 2 5 2 [+] picture button
PCDH11Y ENSGACT00000023428 Protocadherin-11 Y-linked precursor (Protocadherin-11) (Protocadherin- 22) (Protocadherin on the Y chromosome) (PCDH-Y) (Protocadherin prostate cancer) (Protocadherin-PC). [Source:Uniprot/SWISSPROT;Acc:Q9BZA8]
17.7658 -22.93 0.000033909 500 7 2 9 [+] picture button
AMFR ENSGACT00000021628 Autocrine motility factor receptor, isoform 2 (EC 6.3.2.-) (AMF receptor) (gp78). [Source:Uniprot/SWISSPROT;Acc:Q9UKV5]
16.942 -19.7 0.0000392407 500 5 3 6 [+] picture button
FAIM2 (2 of 2) ENSGACT00000000795 Fas apoptotic inhibitory molecule 2 (Lifeguard protein) (Transmembrane BAX inhibitor motif-containing protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9BWQ8]
17.154 -21.12 0.000041171 500 10 2 13 [+] picture button
CLDN2 ENSGACT00000027597 Claudin-2 (SP82). [Source:Uniprot/SWISSPROT;Acc:P57739]
16.0969 -17.14 0.0000681102 500 4 1 5 [+] picture button
B4GALT3 ENSGACT00000013379 Beta-1,4-galactosyltransferase 3 (EC 2.4.1.-) (Beta-1,4-GalTase 3) (Beta4Gal-T3) (b4Gal-T3) (UDP-galactose:beta-N-acetylglucosamine beta- 1,4-galactosyltransferase 3) (UDP-Gal:beta-GlcNAc beta-1,4- galactosyltransferase 3) [Includes: N-acetyllactosamine s [Source:Uniprot/SWISSPROT;Acc:O60512]
16.7931 -20.38 0.0000689006 500 2 4 2 [+] picture button
ENSGACT00000001481 Homolog of Homo sapiens "IRAK1 protein [Source:IPI;Acc:IPI00060149]"Homolog of Homo sapiens "IRAK1 protein [Source:IPI;Acc:IPI00060149]" BY ORTHOLOGY TO:SINFRUT00000145494
16.5062 -19.92 0.0000690812 500 6 1 4 [+] picture button
PCTK3 ENSGACT00000014520 Serine/threonine-protein kinase PCTAIRE-3 (EC 2.7.11.22) (PCTAIRE- motif protein kinase 3). [Source:Uniprot/SWISSPROT;Acc:Q07002]
16.0118 -18.93 0.0000717434 500 5 3 5 [+] picture button
TACR1 ENSGACT00000018027 Substance-P receptor (SPR) (NK-1 receptor) (NK-1R) (Tachykinin receptor 1). [Source:Uniprot/SWISSPROT;Acc:P25103]
16.9789 -19.1 0.0000762032 500 7 2 10 [+] picture button
DCUN1D2 (2 of 2) ENSGACT00000004101 DCN1-like protein 2 (Defective in cullin neddylation protein 1-like protein 2) (DCUN1 domain-containing protein 2). [Source:Uniprot/SWISSPROT;Acc:Q6PH85]
17.5497 -21.84 0.0000786797 500 4 3 6 [+] picture button
NP_056410.2 ENSGACT00000013595 Src homology 3 domain-containing guanine nucleotide exchange factor [Source:RefSeq_peptide;Acc:NP_056410]
16.3055 -18.06 0.0000795813 500 5 1 6 [+] picture button
DAZAP1 ENSGACT00000010990 DAZ-associated protein 1 (Deleted in azoospermia-associated protein 1). [Source:Uniprot/SWISSPROT;Acc:Q96EP5]
16.0539 -22.78 0.0000818709 692 3 3 5 [+] picture button
MXI1 (2 of 2) ENSGACT00000012506 MAX-interacting protein 1 (Protein MXI1). [Source:Uniprot/SWISSPROT;Acc:P50539]
16.5441 -18.12 0.000081989 500 5 1 3 [+] picture button
KIAA0317 ENSGACT00000007690 K0317_HUMAN Isoform 2 of O15033 - Homo sapiens (Human) [Source:Uniprot/Varsplic;Acc:O15033-2]
16.2692 -15.56 0.0000849938 500 7 2 11 [+] picture button
AFF4 ENSGACT00000027465 AF4/FMR2 family member 4 (ALL1-fused gene from chromosome 5q31) (Major CDK9 elongation factor-associated protein). [Source:Uniprot/SWISSPROT;Acc:Q9UHB7]
18.1935 -20.18 0.0000918492 500 4 3 7 [+] picture button
NASP (2 of 2) ENSGACT00000008624 Nuclear autoantigenic sperm protein (NASP). [Source:Uniprot/SWISSPROT;Acc:P49321]
16.0322 -16.56 0.000101016 110 3 1 3 [+] picture button
OFD1 ENSGACT00000005222 Oral-facial-digital syndrome 1 protein (Protein 71-7A). [Source:Uniprot/SWISSPROT;Acc:O75665]
17.3013 -24.1 0.000108139 500 4 3 3 [+] picture button
SNX24 ENSGACT00000022746 Sorting nexin-24. [Source:Uniprot/SWISSPROT;Acc:Q9Y343]
16.8281 -15.26 0.000110029 296 6 2 12 [+] picture button
SLC16A2 ENSGACT00000023391 Monocarboxylate transporter 8 (MCT 8) (MCT 7) (Solute carrier family 16 member 2) (X-linked PEST-containing transporter). [Source:Uniprot/SWISSPROT;Acc:P36021]
17.9069 -19.84 0.000112064 365 3 4 8 [+] picture button
NP_001013009.2 ENSGACT00000025087 similar to TSG118.1 (LOC400506), mRNA [Source:RefSeq_dna;Acc:NM_001012991]
16.8715 -21.12 0.000112463 500 4 1 4 [+] picture button
ENSGACT00000010351 Homolog of Homo sapiens "Prostasin precursor [Source:IPI;Acc:IPI00329538]"Homolog of Homo sapiens "Prostasin precursor [Source:IPI;Acc:IPI00329538]" BY ORTHOLOGY TO:SINFRUT00000144532
17.1236 -23.28 0.000127708 500 5 1 3 [+] picture button
SERBP1 (2 of 2) ENSGACT00000021343 Plasminogen activator inhibitor 1 RNA-binding protein (PAI1 RNA- binding protein 1) (PAI-RBP1) (SERPINE1 mRNA-binding protein 1). [Source:Uniprot/SWISSPROT;Acc:Q8NC51]
18.6473 -20.76 0.000129007 55 1 2 1 [+] picture button
COTL1 ENSGACT00000000612 Coactosin-like protein. [Source:Uniprot/SWISSPROT;Acc:Q14019]
16.0612 -19.52 0.00013103 500 2 1 2 [+] picture button
FGF14 ENSGACT00000002545 Fibroblast growth factor 14 (FGF-14) (Fibroblast growth factor homologous factor 4) (FHF-4). [Source:Uniprot/SWISSPROT;Acc:Q92915]
16.1508 -20.54 0.000140921 500 4 4 5 [+] picture button
ENSGACT00000007120 Homolog of Brachydanio rerio "Actin-binding vascular maintenance protein. [Source:Uniprot/SPTREMBL;Acc:Q76C07]"Homolog of Brachydanio rerio "Actin-binding vascular maintenance protein. [Source:Uniprot/SPTREMBL;Acc:Q76C07]" BY ORTHOLOGY TO:SINFRUT00000182073
18.4555 -24.1 0.000166219 446 6 3 6 [+] picture button
ENSGACT00000022419 conserved hypothetical proteinconserved hypothetical protein BY ORTHOLOGY TO:AAEL000182-RA
16.9418 -22.48 0.000170994 254 2 1 2 [+] picture button
UHRF2 ENSGACT00000022267 E3 ubiquitin-protein ligase UHRF2 (EC 6.3.2.-) (Ubiquitin-like PHD and RING finger domain-containing protein 2) (Ubiquitin-like-containing PHD and RING finger domains protein 2) (Np95/ICBP90-like RING finger protein) (Np95-like RING finger protein) (Nucle [Source:Uniprot/SWISSPROT;Acc:Q96PU4]
18.0211 -18.47 0.000171342 500 5 4 4 [+] picture button
SMO ENSGACT00000026086 Smoothened homolog precursor (SMO) (Gx protein). [Source:Uniprot/SWISSPROT;Acc:Q99835]
15.9739 -19.55 0.000192577 500 7 3 7 [+] picture button
ENSGACT00000020059 hypothetical protein LOC405880 [Source:RefSeq_peptide;Acc:NP_998109]hypothetical protein LOC405880 [Source:RefSeq_peptide;Acc:NP_998109] BY ORTHOLOGY TO:ENSDART00000050824
16.3641 -22.34 0.000195561 500 4 2 5 [+] picture button
DIP2B (2 of 2) ENSGACT00000000873 DIP2 disco-interacting protein 2 homolog B [Source:RefSeq_peptide;Acc:NP_775873]
16.715 -23.01 0.000204678 500 5 4 5 [+] picture button
ENSGACT00000007088 Homolog of Homo sapiens "Msx2-interacting protein [Source:IPI;Acc:IPI00045914]"Homolog of Homo sapiens "Msx2-interacting protein [Source:IPI;Acc:IPI00045914]" BY ORTHOLOGY TO:SINFRUT00000131671
16.6565 -21.84 0.000209795 500 5 4 7 [+] picture button
PDE5A ENSGACT00000002084 cGMP-specific 3',5'-cyclic phosphodiesterase (EC 3.1.4.35) (CGB-PDE) (cGMP-binding cGMP-specific phosphodiesterase). [Source:Uniprot/SWISSPROT;Acc:O76074]
17.6237 -24.11 0.000216837 500 4 2 5 [+] picture button
EPAS1 ENSGACT00000015121 Endothelial PAS domain-containing protein 1 (EPAS-1) (Member of PAS protein 2) (Basic-helix-loop-helix-PAS protein MOP2) (Hypoxia- inducible factor 2 alpha) (HIF-2 alpha) (HIF2 alpha) (HIF-1 alpha-like factor) (HLF). [Source:Uniprot/SWISSPROT;Acc:Q99814]
16.1192 -18.71 0.00022241 500 2 1 2 [+] picture button
GPX7 ENSGACT00000007004 Glutathione peroxidase 7 precursor (EC 1.11.1.9) (CL683). [Source:Uniprot/SWISSPROT;Acc:Q96SL4]
16.1459 -15.56 0.000277598 265 6 2 8 [+] picture button

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Download table: GFF TXT
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