spacer

Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-137

860 hits found.


Page 1 of 18
1 2 3 4 5 6 7 8 9 10 11 .. 18 next >>

Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
picture button picture button picture button picture button picture button picture button picture button picture button picture button picture button
PRKAA1 ENSGACT00000021059 5'-AMP-activated protein kinase catalytic subunit alpha-1 (EC 2.7.11.1) (AMPK alpha-1 chain). [Source:Uniprot/SWISSPROT;Acc:Q13131]
18.6231 -17.1 0.00000000145587 500 7 8 12 [+] picture button
LBX1 (1 of 3) ENSGACT00000024226 Transcription factor LBX1 (Ladybird homeobox protein homolog 1). [Source:Uniprot/SWISSPROT;Acc:P52954]
15.9087 -8.72 0.0000000177516 500 3 13 3 [+] picture button
ARID4B ENSGACT00000005700 AT-rich interactive domain-containing protein 4B (ARID domain- containing protein 4B) (Histone deacetylase complex subunit SAP180) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Retinoblastoma-binding protein 1-like 1) (Breast c [Source:Uniprot/SWISSPROT;Acc:Q4LE39]
17.8831 -12.46 0.0000000398809 500 5 11 10 [+] picture button
SNF1LK ENSGACT00000004544 Serine/threonine-protein kinase SNF1-like kinase 1 (EC 2.7.11.1) (Serine/threonine-protein kinase SNF1LK) (SIK1). [Source:Uniprot/SWISSPROT;Acc:P57059]
16.6565 -11.64 0.0000000843479 500 5 2 5 [+] picture button
NEUROD1 ENSGACT00000002685 Neurogenic differentiation factor 1 (NeuroD1) (NeuroD). [Source:Uniprot/SWISSPROT;Acc:Q13562]
16.3342 -10.27 0.0000000896042 500 3 4 3 [+] picture button
SGCG ENSGACT00000009104 Gamma-sarcoglycan (Gamma-SG) (35 kDa dystrophin-associated glycoprotein) (35DAG). [Source:Uniprot/SWISSPROT;Acc:Q13326]
16.9045 -15.75 0.000000518308 500 3 1 3 [+] picture button
FGF11 (1 of 2) ENSGACT00000026395 Fibroblast growth factor 11 (FGF-11) (Fibroblast growth factor homologous factor 3) (FHF-3). [Source:Uniprot/SWISSPROT;Acc:Q92914]
16.7836 -10.36 0.000000565364 500 5 4 6 [+] picture button
ITM2C ENSGACT00000017845 Integral membrane protein 2C (Transmembrane protein BRI3) (Cerebral protein 14) [Contains: CT-BRI3]. [Source:Uniprot/SWISSPROT;Acc:Q9NQX7]
18.0621 -15.83 0.00000102192 489 5 5 9 [+] picture button
ENSGACT00000003059 Homolog of Brachydanio rerio "Protein kinase Bsk146. [Source:Uniprot/SPTREMBL;Acc:Q90ZY4]"Homolog of Brachydanio rerio "Protein kinase Bsk146. [Source:Uniprot/SPTREMBL;Acc:Q90ZY4]" BY ORTHOLOGY TO:SINFRUT00000139202
17.3013 -12.03 0.00000130259 500 5 3 5 [+] picture button
BACH2 ENSGACT00000008275 Transcription regulator protein BACH2 (BTB and CNC homolog 2). [Source:Uniprot/SWISSPROT;Acc:Q9BYV9]
16.5847 -5.85 0.00000266384 500 1 6 2 [+] picture button
FOS (1 of 3) ENSGACT00000013870 Proto-oncogene protein c-fos (Cellular oncogene fos) (G0/G1 switch regulatory protein 7). [Source:Uniprot/SWISSPROT;Acc:P01100]
17.2543 -17.11 0.00000298454 489 6 5 9 [+] picture button
C6orf137 (2 of 2) ENSGACT00000016901 Uncharacterized protein C6orf137 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5T9V7]
16.8715 -10.97 0.00000316458 500 6 3 7 [+] picture button
REXO1L6P ENSGACT00000010255 transcription elongation factor B polypeptide 3 binding protein 1 [Source:RefSeq_peptide;Acc:NP_065746] [from human gene ENSG00000079313]transcription elongation factor B polypeptide 3 binding protein 1 [Source:RefSeq_peptide;Acc:NP_065746] [from human gene ENSG00000079313] BY ORTHOLOGY TO:ENSXETT00000017865
15.7969 -11.43 0.00000487059 500 7 3 8 [+] picture button
FUBP3 (1 of 2) ENSGACT00000022105 Far upstream element-binding protein 3 (FUSE-binding protein 3). [Source:Uniprot/SWISSPROT;Acc:Q96I24]
16.1192 -6.49 0.00000638368 500 5 3 6 [+] picture button
PRDM1 (1 of 2) ENSGACT00000002269 PR domain zinc finger protein 1 (PR domain-containing protein 1) (Beta-interferon gene positive-regulatory domain I-binding factor) (BLIMP-1) (Positive regulatory domain I-binding factor 1) (PRDI- binding factor 1) (PRDI-BF1). [Source:Uniprot/SWISSPROT;Acc:O75626]
17.5162 -13.94 0.00000664441 500 8 5 9 [+] picture button
DZIP1 ENSGACT00000018496 Zinc finger protein DZIP1 (DAZ-interacting protein 1/2). [Source:Uniprot/SWISSPROT;Acc:Q86YF9]
16.0742 -6.58 0.0000067503 312 6 2 11 [+] picture button
ATG4C ENSGACT00000009203 Cysteine protease ATG4C (EC 3.4.22.-) (Autophagy-related protein 4 homolog C) (Autophagin-3) (Autophagy-related cysteine endopeptidase 3) (AUT-like 3 cysteine endopeptidase). [Source:Uniprot/SWISSPROT;Acc:Q96DT6]
15.6555 -13.35 0.00000721949 500 3 1 4 [+] picture button
KCNH1 (1 of 2) ENSGACT00000025930 Potassium voltage-gated channel subfamily H member 1 (Voltage-gated potassium channel subunit Kv10.1) (Ether-a-go-go potassium channel 1) (hEAG1) (h-eag). [Source:Uniprot/SWISSPROT;Acc:O95259]
16.5778 -9.76 0.00000892186 500 3 2 4 [+] picture button
NP_835227.1 ENSGACT00000011200 RIKEN cDNA 1300010M03 gene [Source:MarkerSymbol;Acc:MGI:1915248]RIKEN cDNA 1300010M03 gene [Source:MarkerSymbol;Acc:MGI:1915248] BY ORTHOLOGY TO:ENSMUST00000017946
16.5252 -15.39 0.0000104465 500 8 5 10 [+] picture button
ENSGACT00000015391 Homolog of Homo sapiens "Urotensin II receptor [Source:IPI;Acc:IPI00007696]"Homolog of Homo sapiens "Urotensin II receptor [Source:IPI;Acc:IPI00007696]" BY ORTHOLOGY TO:SINFRUT00000129229
16.3342 -8.88 0.0000127896 500 5 3 9 [+] picture button
BLNK ENSGACT00000003843 B-cell linker protein (Cytoplasmic adapter protein) (B-cell adapter containing SH2 domain protein) (B-cell adapter containing Src homology 2 domain protein) (Src homology 2 domain-containing leukocyte protein of 65 kDa) (SLP-65). [Source:Uniprot/SWISSPROT;Acc:Q8WV28]
17.624 -11.73 0.0000133732 232 2 1 3 [+] picture button
VAMP8 ENSGACT00000018015 Vesicle-associated membrane protein 8 (VAMP-8) (Endobrevin) (EDB). [Source:Uniprot/SWISSPROT;Acc:Q9BV40]
15.7214 -8.27 0.0000158719 432 7 2 8 [+] picture button
ENSGACT00000026882 Homolog of Brachydanio rerio "LIM class homeodomain protein. [Source:Uniprot/SPTREMBL;Acc:O13106]"Homolog of Brachydanio rerio "LIM class homeodomain protein. [Source:Uniprot/SPTREMBL;Acc:O13106]" BY ORTHOLOGY TO:SINFRUT00000151087
17.2886 -9.27 0.0000180507 500 8 2 8 [+] picture button
ENSGACT00000022721 vimentin [Source:RefSeq_peptide;Acc:NP_571947]vimentin [Source:RefSeq_peptide;Acc:NP_571947] BY ORTHOLOGY TO:ENSDART00000003745
15.7642 -11.46 0.0000196695 467 5 4 5 [+] picture button
ERG ENSGACT00000016341 Transcriptional regulator ERG (Transforming protein ERG). [Source:Uniprot/SWISSPROT;Acc:P11308]
15.9043 -9.09 0.0000206579 500 5 5 4 [+] picture button
NIN ENSGACT00000015735 Ninein (hNinein) (Glycogen synthase kinase 3 beta-interacting protein) (GSK3B-interacting protein). [Source:Uniprot/SWISSPROT;Acc:Q8N4C6]
17.0864 -13.72 0.0000228133 500 8 2 16 [+] picture button
INPP5A ENSGACT00000003704 Type I inositol-1,4,5-trisphosphate 5-phosphatase (EC 3.1.3.56) (5PTase). [Source:Uniprot/SWISSPROT;Acc:Q14642]
16.3682 -10.91 0.0000243766 500 4 2 6 [+] picture button
CYB5R4 ENSGACT00000018749 cytochrome b5 reductase 4 [Source:RefSeq_peptide;Acc:NP_057314]
16.8311 -9.53 0.000025936 500 8 3 9 [+] picture button
ENPP6 ENSGACT00000025948 Ectonucleotide pyrophosphatase/phosphodiesterase family member 6 precursor (EC 3.1.-.-) (E-NPP6) (NPP-6) [Contains: Ectonucleotide pyrophosphatase/phosphodiesterase family member 6 soluble form]. [Source:Uniprot/SWISSPROT;Acc:Q6UWR7]
16.0396 -10.41 0.0000264794 500 7 1 8 [+] picture button
ADCY2 ENSGACT00000008647 Adenylate cyclase type 2 (EC 4.6.1.1) (Adenylate cyclase type II) (ATP pyrophosphate-lyase 2) (Adenylyl cyclase 2). [Source:Uniprot/SWISSPROT;Acc:Q08462]
15.6894 -10.97 0.0000285286 500 7 1 9 [+] picture button
NUDCD2 ENSGACT00000024060 NudC domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q8WVJ2]
16.2596 -8.12 0.0000286437 294 6 3 12 [+] picture button
PADI3 ENSGACT00000006373 Protein-arginine deiminase type-3 (EC 3.5.3.15) (Protein-arginine deiminase type III) (Peptidylarginine deiminase III). [Source:Uniprot/SWISSPROT;Acc:Q9ULW8]
16.2084 -8.04 0.0000294596 608 6 1 7 [+] picture button
C9orf4 ENSGACT00000011914 Uncharacterized protein C9orf4 (Brain protein CG-6). [Source:Uniprot/SWISSPROT;Acc:Q9P0K9]
15.9386 -7.7 0.000034845 406 8 3 11 [+] picture button
ENSGACT00000003976 Homolog of Homo sapiens "Ectonucleotide pyrophosphatase/phosphodiesterase 7 precursor [Source:IPI;Acc:IPI00419668]"Homolog of Homo sapiens "Ectonucleotide pyrophosphatase/phosphodiesterase 7 precursor [Source:IPI;Acc:IPI00419668]" BY ORTHOLOGY TO:SINFRUT00000154262
15.9185 -14.45 0.0000348839 153 3 2 5 [+] picture button
SYT1 (1 of 2) ENSGACT00000026496 Synaptotagmin-1 (Synaptotagmin I) (SytI) (p65). [Source:Uniprot/SWISSPROT;Acc:P21579]
17.5375 -10.62 0.0000393238 500 5 4 10 [+] picture button
NP_073574.1 (1 of 2) ENSGACT00000025758 lipid phosphate phosphatase-related protein type 2 [Source:RefSeq_peptide;Acc:NP_073574]
16.6565 -13.57 0.0000452462 500 4 4 5 [+] picture button
SH3PXD2A ENSGACT00000021571 SH3 and PX domain-containing protein 2A (SH3 multiple domains protein 1) (Five SH3 domain-containing protein) (Adaptor protein TKS5). [Source:Uniprot/SWISSPROT;Acc:Q5TCZ1]
16.3733 -10.72 0.0000459102 500 8 4 8 [+] picture button
NME3 ENSGACT00000017275 Nucleoside diphosphate kinase 3 (EC 2.7.4.6) (NDK 3) (NDP kinase 3) (Nucleoside diphosphate kinase C) (NDPKC) (nm23-H3) (DR-nm23). [Source:Uniprot/SWISSPROT;Acc:Q13232]
17.0084 -11.7 0.0000484639 500 5 3 7 [+] picture button
APRIN ENSGACT00000027225 androgen-induced prostate proliferative shutoff associated protein [Source:RefSeq_peptide;Acc:NP_055847]
15.8558 -10.45 0.0000504108 500 6 2 8 [+] picture button
NP_653323.1 ENSGACT00000008129 KPL2 protein isoform 2 [Source:RefSeq_peptide;Acc:NP_653323]
16.0118 -7.86 0.0000506602 500 3 1 3 [+] picture button
TJP2 ENSGACT00000023772 Tight junction protein ZO-2 (Zonula occludens 2 protein) (Zona occludens 2 protein) (Tight junction protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9UDY2]
15.6401 -7.95 0.0000508305 500 4 1 5 [+] picture button
FABP2 (1 of 2) ENSGACT00000023559 Fatty acid-binding protein, intestinal (I-FABP) (FABPI). [Source:Uniprot/SWISSPROT;Acc:P12104]
15.9185 -8.77 0.0000653626 158 3 1 4 [+] picture button
NEUROD6 ENSGACT00000022727 Neurogenic differentiation factor 6 (NeuroD6) (Protein atonal homolog 2). [Source:Uniprot/SWISSPROT;Acc:Q96NK8]
16.3625 -11.32 0.0000665489 500 4 2 4 [+] picture button
PDCD6IP ENSGACT00000007386 Programmed cell death 6-interacting protein (PDCD6-interacting protein) (ALG-2-interacting protein 1) (Hp95). [Source:Uniprot/SWISSPROT;Acc:Q8WUM4]
16.6872 -7.8 0.0000675658 500 6 3 10 [+] picture button
ADCY6 (1 of 2) ENSGACT00000011360 Adenylate cyclase type 6 (EC 4.6.1.1) (Adenylate cyclase type VI) (ATP pyrophosphate-lyase 6) (Adenylyl cyclase 6) (Ca(2+)-inhibitable adenylyl cyclase). [Source:Uniprot/SWISSPROT;Acc:O43306]
19.0842 -19.83 0.0000685111 500 9 4 9 [+] picture button
RAE1 ENSGACT00000013144 mRNA-associated protein mrnp 41 (Rae1 protein homolog). [Source:Uniprot/SWISSPROT;Acc:P78406]
16.642 -16.2 0.0000715108 331 10 2 14 [+] picture button
HSD3B7 ENSGACT00000018116 3 beta-hydroxysteroid dehydrogenase type 7 (3 beta-hydroxysteroid dehydrogenase type VII) (3-beta-HSD VII) (3-beta-hydroxy-Delta(5)-C27 steroid oxidoreductase) (EC 1.1.1.-) (C(27) 3-beta-HSD). [Source:Uniprot/SWISSPROT;Acc:Q9H2F3]
15.6962 -11.14 0.000077498 507 7 1 8 [+] picture button
CCAR1 ENSGACT00000010505 Cell division cycle and apoptosis regulator protein 1 (Cell cycle and apoptosis regulatory protein 1) (CARP-1) (Death inducer with SAP domain). [Source:Uniprot/SWISSPROT;Acc:Q8IX12]
16.8869 -14.01 0.0000903841 526 4 2 4 [+] picture button
C6orf129 ENSGACT00000015261 OTTHUMP00000016329 (Chromosome 6 open reading frame 129). [Source:Uniprot/SPTREMBL;Acc:Q5T7F7]
16.0777 -12.84 0.0000907069 699 3 5 3 [+] picture button
ENSGACT00000012926 similar to nuclear matrix transcription factor 4 [Source:RefSeq_peptide;Acc:NP_001038628]similar to nuclear matrix transcription factor 4 [Source:RefSeq_peptide;Acc:NP_001038628] BY ORTHOLOGY TO:ENSDART00000086265
16.3342 -12.09 0.0000944006 500 4 2 5 [+] picture button

Page 1 of 18
1 2 3 4 5 6 7 8 9 10 11 .. 18 next >>

Download table: GFF TXT
spacer
spacer