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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-135a

805 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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FOXN2 ENSGACT00000007261 Forkhead box protein N2 (Human T-cell leukemia virus enhancer factor). [Source:Uniprot/SWISSPROT;Acc:P32314]
20.4292 -23.31 1.73887e-17 500 3 4 3 [+] picture button
NR3C2 ENSGACT00000022756 Mineralocorticoid receptor (MR). [Source:Uniprot/SWISSPROT;Acc:P08235]
16.2951 -17.45 8.16856e-10 500 2 11 4 [+] picture button
WAC (1 of 2) ENSGACT00000002191 WW domain-containing adapter protein with coiled-coil. [Source:Uniprot/SWISSPROT;Acc:Q9BTA9]
18.1925 -20.42 3.07583e-07 500 6 12 5 [+] picture button
MRPL33 ENSGACT00000017088 Mitochondrial 39S ribosomal protein L33 (L33mt) (MRP-L33). [Source:Uniprot/SWISSPROT;Acc:O75394]
16.4683 -15.09 9.3826e-07 314 9 2 11 [+] picture button
ENSGACT00000006032 NOT ANNOTATED
18.4834 -22.24 1e-06 500 7 1 4 [+] picture button
ENSGACT00000018778 NOT ANNOTATED
15.8277 -17.62 1e-06 500 5 1 3 [+] picture button
ESRRA ENSGACT00000026860 Steroid hormone receptor ERR1 (Estrogen-related receptor, alpha) (ERR- alpha) (Estrogen receptor-like 1). [Source:Uniprot/SWISSPROT;Acc:P11474]
16.2267 -13.49 1.17353e-06 500 1 4 1 [+] picture button
VPS26A ENSGACT00000021248 Vacuolar protein sorting-associated protein 26A (Vesicle protein sorting 26A) (hVPS26). [Source:Uniprot/SWISSPROT;Acc:O75436]
16.65 -10.77 1.29551e-06 402 6 2 7 [+] picture button
CEP78 ENSGACT00000008141 78 kDa centrosomal protein. [Source:Uniprot/SPTREMBL;Acc:Q5JTW2]
16.1192 -15.58 1.77199e-06 500 10 3 14 [+] picture button
ENSGACT00000020819 hypothetical protein LOC541479 [Source:RefSeq_peptide;Acc:NP_001014314]hypothetical protein LOC541479 [Source:RefSeq_peptide;Acc:NP_001014314] BY ORTHOLOGY TO:ENSDART00000102692
18.8592 -13.95 2.44051e-06 500 5 2 5 [+] picture button
TRPC1 ENSGACT00000004934 Short transient receptor potential channel 1 (TrpC1) (TRP-1 protein). [Source:Uniprot/SWISSPROT;Acc:P48995]
17.439 -14.32 3.73026e-06 500 3 1 3 [+] picture button
ANLN ENSGACT00000010764 Actin-binding protein anillin. [Source:Uniprot/SWISSPROT;Acc:Q9NQW6]
16.764 -11.65 7.13039e-06 500 5 3 6 [+] picture button
NP_001073985.1 ENSGACT00000027449 similar to glutaredoxin cysteine-rich 1 protein [Source:RefSeq_peptide;Acc:NP_001073985]
15.904 -19.67 8.50395e-06 500 5 3 6 [+] picture button
ATXN7 ENSGACT00000012221 Ataxin-7 (Spinocerebellar ataxia type 7 protein). [Source:Uniprot/SWISSPROT;Acc:O15265]
15.9247 -11.27 1.06076e-05 500 5 4 5 [+] picture button
GDAP1 ENSGACT00000003602 Ganglioside-induced differentiation-associated protein 1 (GDAP1). [Source:Uniprot/SWISSPROT;Acc:Q8TB36]
15.9262 -9.15 1.17686e-05 384 7 2 10 [+] picture button
TRPM4 (1 of 2) ENSGACT00000010508 Transient receptor potential cation channel subfamily M member 4 (Long transient receptor potential channel 4) (hTRPM4) (Melastatin-4) (Calcium-activated non-selective cation channel 1). [Source:Uniprot/SWISSPROT;Acc:Q8TD43]
16.4416 -9.79 1.50147e-05 500 8 1 10 [+] picture button
NP_056263.1 ENSGACT00000024205 DPCD protein [Source:RefSeq_peptide;Acc:NP_056263]
16.1192 -14.49 1.76794e-05 500 4 2 4 [+] picture button
TBX1 ENSGACT00000017299 T-box transcription factor TBX1 (T-box protein 1) (Testis-specific T- box protein). [Source:Uniprot/SWISSPROT;Acc:O43435]
16.6753 -11.41 1.79938e-05 500 6 2 11 [+] picture button
ENSGACT00000004694 nuclear receptor co-repressor/HDAC3 complex subunit [Source:RefSeq_peptide;Acc:NP_001026540]nuclear receptor co-repressor/HDAC3 complex subunit [Source:RefSeq_peptide;Acc:NP_001026540] BY ORTHOLOGY TO:ENSGALT00000001912
16.638 -14 2.45763e-05 500 10 5 11 [+] picture button
E2F2 ENSGACT00000012648 Transcription factor E2F2 (E2F-2). [Source:Uniprot/SWISSPROT;Acc:Q14209]
17.9931 -12.35 2.59361e-05 500 6 1 5 [+] picture button
FTHL17 ENSGACT00000020480 Ferritin heavy polypeptide-like 17. [Source:Uniprot/SWISSPROT;Acc:Q9BXU8]
18.4199 -14.79 2.76297e-05 271 4 1 3 [+] picture button
GABRQ ENSGACT00000026866 Gamma-aminobutyric-acid receptor subunit theta precursor (GABA(A) receptor subunit theta). [Source:Uniprot/SWISSPROT;Acc:Q9UN88]
16.6237 -22.06 3.0002e-05 500 8 5 9 [+] picture button
SART3 ENSGACT00000011628 Squamous cell carcinoma antigen recognized by T-cells 3 (SART-3) (hSART-3) (Tat-interacting protein of 110 kDa) (Tip110). [Source:Uniprot/SWISSPROT;Acc:Q15020]
16.1032 -12.47 3.31932e-05 545 7 3 7 [+] picture button
SYDE1 ENSGACT00000013321 synapse defective 1, Rho GTPase, homolog 1 [Source:RefSeq_peptide;Acc:NP_149014]
16.5576 -20.51 3.6003e-05 500 6 4 12 [+] picture button
P4HA3 ENSGACT00000014971 prolyl 4-hydroxylase, alpha III subunit precursor [Source:RefSeq_peptide;Acc:NP_878907]
16.3625 -20.99 3.83886e-05 492 6 2 8 [+] picture button
EPO ENSGACT00000026379 Erythropoietin precursor (Epoetin). [Source:Uniprot/SWISSPROT;Acc:P01588]
17.6237 -12.39 4.15811e-05 500 4 2 5 [+] picture button
Q99687-2 ENSGACT00000007590 Meis1, myeloid ecotropic viral integration site 1 homolog 3 isoform 1 [Source:RefSeq_peptide;Acc:NP_064545]
16.2787 -15.61 4.75899e-05 500 9 4 10 [+] picture button
C9 ENSGACT00000020968 Complement component C9 precursor [Contains: Complement component C9a; Complement component C9b]. [Source:Uniprot/SWISSPROT;Acc:P02748]
16.2509 -14.98 4.974e-05 410 2 1 3 [+] picture button
CD3EAP ENSGACT00000016718 RNA polymerase I-associated factor PAF49 (Anti-sense to ERCC-1 protein) (ASE-1) (CD3-epsilon-associated protein) (CD3E-associated protein) (CAST). [Source:Uniprot/SWISSPROT;Acc:O15446]
16.1139 -15.51 5.2984e-05 500 3 1 4 [+] picture button
LRRK2 ENSGACT00000012683 Leucine-rich repeat serine/threonine-protein kinase 2 (EC 2.7.11.1) (Dardarin). [Source:Uniprot/SWISSPROT;Acc:Q5S007]
16.9789 -13.54 5.42368e-05 500 9 1 8 [+] picture button
SCYL3 ENSGACT00000015407 Protein-associating with the carboxyl-terminal domain of ezrin (Ezrin- binding protein PACE-1) (SCY1-like protein 3). [Source:Uniprot/SWISSPROT;Acc:Q8IZE3]
15.9495 -11.05 5.68187e-05 487 7 2 7 [+] picture button
FAM130A2 ENSGACT00000007128 TGF-beta-induced apoptosis protein 2 (TAIP-2). [Source:Uniprot/SWISSPROT;Acc:Q8WYN3]
17.3013 -11.41 5.71432e-05 500 5 6 15 [+] picture button
DGKE ENSGACT00000024126 Diacylglycerol kinase epsilon (EC 2.7.1.107) (Diglyceride kinase epsilon) (DGK-epsilon) (DAG kinase epsilon). [Source:Uniprot/SWISSPROT;Acc:P52429]
16.0118 -12.06 5.95438e-05 500 5 1 8 [+] picture button
CHAT (2 of 2) ENSGACT00000003248 Choline O-acetyltransferase (EC 2.3.1.6) (CHOACTase) (Choline acetylase) (ChAT). [Source:Uniprot/SWISSPROT;Acc:P28329]
18.6983 -20 6.05304e-05 500 5 3 8 [+] picture button
SSH1 ENSGACT00000011709 Protein phosphatase Slingshot homolog 1 (EC 3.1.3.48) (EC 3.1.3.16) (SSH-1L) (hSSH-1L). [Source:Uniprot/SWISSPROT;Acc:Q8WYL5]
16.8715 -17.98 6.47805e-05 500 10 3 8 [+] picture button
HEYL ENSGACT00000009964 hairy/enhancer-of-split related with YRPW motif-like [Source:RefSeq_peptide;Acc:NP_055386]
15.9624 -17.02 7.02627e-05 500 4 2 4 [+] picture button
STK25 ENSGACT00000020801 Serine/threonine-protein kinase 25 (EC 2.7.11.1) (Sterile 20/oxidant stress-response kinase 1) (Ste20/oxidant stress response kinase 1) (SOK-1) (Ste20-like kinase). [Source:Uniprot/SWISSPROT;Acc:O00506]
17.9651 -11.31 7.11203e-05 281 4 4 4 [+] picture button
NPFFR1 ENSGACT00000017368 Neuropeptide FF receptor 1 (G-protein coupled receptor 147) (RFamide- related peptide receptor OT7T022). [Source:Uniprot/SWISSPROT;Acc:Q9GZQ6]
17.9461 -15.19 7.2309e-05 500 3 2 3 [+] picture button
ST6GAL2 ENSGACT00000004036 beta-galactoside alpha-2,6-sialyltransferase II [Source:RefSeq_peptide;Acc:NP_115917]
16.715 -11.65 7.86375e-05 500 4 4 7 [+] picture button
ENSGACT00000018236 si:dkey-1h6.5 [Source:RefSeq_peptide;Acc:NP_999962]si:dkey-1h6.5 [Source:RefSeq_peptide;Acc:NP_999962] BY ORTHOLOGY TO:ENSDART00000008306
16.764 -13.03 7.99326e-05 500 6 4 7 [+] picture button
GRHL1 ENSGACT00000011693 Grainyhead-like protein 1 homolog (Transcription factor CP2-like 2) (Transcription factor LBP-32) (NH32) (Mammalian grainyhead). [Source:Uniprot/SWISSPROT;Acc:Q9NZI5]
16.5491 -13.36 8.02356e-05 500 9 5 13 [+] picture button
FAM126A ENSGACT00000008072 Hyccin (Protein FAM126A) (Down-regulated by CTNNB1 protein A). [Source:Uniprot/SWISSPROT;Acc:Q9BYI3]
17.0555 -14.15 8.09901e-05 269 5 2 5 [+] picture button
ENSGACT00000011206 NOT ANNOTATED
17.9471 -15.25 8.29226e-05 320 6 1 6 [+] picture button
NP_085139.2 ENSGACT00000010744 CDNA FLJ14480 fis, clone MAMMA1002215 (KIAA1706 protein). [Source:Uniprot/SPTREMBL;Acc:Q7L9B9]
15.8047 -17.71 9.25492e-05 208 3 4 5 [+] picture button
ENSGACT00000015666 Homolog of Homo sapiens "Splice Isoform 5 of Ubiquitin-conjugating enzyme E2 variant 1 [Source:IPI;Acc:IPI00454991]"Homolog of Homo sapiens "Splice Isoform 5 of Ubiquitin-conjugating enzyme E2 variant 1 [Source:IPI;Acc:IPI00454991]" BY ORTHOLOGY TO:SINFRUT00000130332
16.5887 -10.98 9.28511e-05 500 4 3 5 [+] picture button
C2orf3 ENSGACT00000021441 GC-rich sequence DNA-binding factor (GCF) (Transcription factor 9) (TCF-9). [Source:Uniprot/SWISSPROT;Acc:P16383]
16.3765 -13.24 9.56909e-05 432 5 1 8 [+] picture button
PACRG ENSGACT00000006891 Parkin coregulated gene protein (PARK2 coregulated) (Molecular chaperone/chaperonin-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q96M98]
16.8715 -13.28 0.00010557 500 7 1 6 [+] picture button
FOSL2 ENSGACT00000017160 Fos-related antigen 2. [Source:Uniprot/SWISSPROT;Acc:P15408]
16.8303 -10.4 0.000106512 500 5 3 5 [+] picture button
GAB2 ENSGACT00000016072 GRB2-associated-binding protein 2 (GRB2-associated binder 2) (pp100). [Source:Uniprot/SWISSPROT;Acc:Q9UQC2]
18.0292 -14.16 0.000109629 500 6 2 8 [+] picture button
COG2 ENSGACT00000012946 Conserved oligomeric Golgi complex component 2 (Low density lipoprotein receptor defect C-complementing protein). [Source:Uniprot/SWISSPROT;Acc:Q14746]
18.0535 -15.46 0.000119342 500 2 1 6 [+] picture button

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Download table: GFF TXT
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