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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-132

969 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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GRM3 ENSGACT00000016862 Metabotropic glutamate receptor 3 precursor (mGluR3). [Source:Uniprot/SWISSPROT;Acc:Q14832]
16.7838 -15.5 0.000000000221455 500 7 12 9 [+] picture button
NP_055530.2 ENSGACT00000026707 Rho GTPase-activating protein [Source:RefSeq_peptide;Acc:NP_055530]
15.517 -17.46 0.00000000024519 500 4 12 5 [+] picture button
ACVR2B (1 of 2) ENSGACT00000022089 Activin receptor type-2B precursor (EC 2.7.11.30) (Activin receptor type IIB) (ACTR-IIB). [Source:Uniprot/SWISSPROT;Acc:Q13705]
16.6565 -20.03 0.00000000291201 500 5 4 7 [+] picture button
C6orf137 (1 of 2) ENSGACT00000017880 Uncharacterized protein C6orf137 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5T9V7]
17.0864 -19.87 0.0000000129993 500 5 1 8 [+] picture button
VPS13A ENSGACT00000010569 Vacuolar protein sorting-associated protein 13A (Chorein) (Chorea- acanthocytosis protein). [Source:Uniprot/SWISSPROT;Acc:Q96RL7]
16.389 -19.01 0.0000000708163 500 6 2 9 [+] picture button
SF4 ENSGACT00000020111 Splicing factor 4 (RNA-binding protein RBP). [Source:Uniprot/SWISSPROT;Acc:Q8IWZ8]
16.1298 -10.53 0.000000101934 439 9 2 12 [+] picture button
SOX5 ENSGACT00000025274 Transcription factor SOX-5. [Source:Uniprot/SWISSPROT;Acc:P35711]
15.7302 -11.8 0.000000345637 500 4 10 6 [+] picture button
USP9X ENSGACT00000002647 Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC 3.1.2.15) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific-processing protease FAF-X) (Deubiquitinating enzyme FAF-X) (Fat facets protein-related, X- linked) (Ubiquitin-specific protease 9, X chro [Source:Uniprot/SWISSPROT;Acc:Q93008]
16.6117 -10.93 0.000000941741 500 4 9 5 [+] picture button
ENSGACT00000026243 NOT ANNOTATED
17.8271 -24.19 0.000001 380 6 1 11 [+] picture button
FAM82B ENSGACT00000002421 Protein FAM82B. [Source:Uniprot/SWISSPROT;Acc:Q96DB5]
16.2817 -17.01 0.00000108973 403 8 4 11 [+] picture button
CWF19L1 ENSGACT00000000962 CWF19-like 1, cell cycle control [Source:RefSeq_peptide;Acc:NP_060764]
17.3966 -13.17 0.00000142907 174 6 1 8 [+] picture button
NAT10 ENSGACT00000013047 N-acetyltransferase 10 (EC 2.3.1.-). [Source:Uniprot/SWISSPROT;Acc:Q9H0A0]
16.0615 -24.08 0.00000313817 517 6 1 8 [+] picture button
SLC25A14 ENSGACT00000027594 Brain mitochondrial carrier protein 1 (BMCP-1) (Mitochondrial uncoupling protein 5) (UCP 5) (Solute carrier family 25 member 14). [Source:Uniprot/SWISSPROT;Acc:O95258]
15.5819 -22.84 0.00000340697 500 7 1 8 [+] picture button
SMARCA4 (2 of 2) ENSGACT00000021206 Probable global transcription activator SNF2L4 (EC 3.6.1.-) (ATP- dependent helicase SMARCA4) (SNF2-beta) (BRG-1 protein) (Mitotic growth and transcription activator) (Brahma protein homolog 1) (SWI/SNF-related matrix-associated actin-dependent regulator [Source:Uniprot/SWISSPROT;Acc:P51532]
16.3342 -23.23 0.00000370509 500 10 1 10 [+] picture button
STARD7 ENSGACT00000022797 StAR-related lipid transfer protein 7 (StARD7) (START domain- containing protein 7) (Protein GTT1). [Source:Uniprot/SWISSPROT;Acc:Q9NQZ5]
16.3342 -20.2 0.00000483419 500 6 3 9 [+] picture button
RBM12 ENSGACT00000005545 Copine-1 (Copine I). [Source:Uniprot/SWISSPROT;Acc:Q99829]
17.9461 -26.14 0.00000518214 500 7 6 8 [+] picture button
DENND4A ENSGACT00000006461 C-myc promoter-binding protein (DENN domain-containing protein 4A). [Source:Uniprot/SWISSPROT;Acc:Q7Z401]
16.9744 -18.98 0.00000642919 365 7 2 13 [+] picture button
EPHB3 (2 of 2) ENSGACT00000021253 Ephrin type-B receptor 3 precursor (EC 2.7.10.1) (Tyrosine-protein kinase receptor HEK-2). [Source:Uniprot/SWISSPROT;Acc:P54753]
15.6939 -11.93 0.0000114489 500 7 2 9 [+] picture button
SETD1B ENSGACT00000022498 SET domain-containing protein 1B (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9UPS6]
15.768 -12.55 0.0000127396 500 6 5 9 [+] picture button
MTHFD2 ENSGACT00000011001 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial precursor [Includes: NAD-dependent methylenetetrahydrofolate dehydrogenase (EC 1.5.1.15); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]. [Source:Uniprot/SWISSPROT;Acc:P13995]
17.6777 -16.63 0.0000158616 515 9 4 9 [+] picture button
TYW3 ENSGACT00000019347 tRNA wybutosine-synthesizing protein 3 homolog (EC 2.1.1.-). [Source:Uniprot/SWISSPROT;Acc:Q6IPR3]
17.1939 -15.11 0.000015955 500 8 2 11 [+] picture button
PSPC1 ENSGACT00000019706 paraspeckle protein 1 [Source:RefSeq_peptide;Acc:NP_001035879]
16.2756 -13.97 0.0000164152 500 7 1 7 [+] picture button
ACTR10 ENSGACT00000016839 Actin-related protein 10 (hARP11). [Source:Uniprot/SWISSPROT;Acc:Q9NZ32]
15.8714 -14.06 0.0000206547 401 8 3 17 [+] picture button
LEMD3 ENSGACT00000025527 Inner nuclear membrane protein Man1 (LEM domain-containing protein 3). [Source:Uniprot/SWISSPROT;Acc:Q9Y2U8]
15.7265 -11.25 0.0000211401 500 6 1 9 [+] picture button
POLR2C ENSGACT00000002887 DNA-directed RNA polymerase II 33 kDa polypeptide (EC 2.7.7.6) (RPB3) (RNA polymerase II subunit 3) (RPB33) (RPB31). [Source:Uniprot/SWISSPROT;Acc:P19387]
15.9185 -15.18 0.0000220096 94 2 4 3 [+] picture button
PPP1R16A ENSGACT00000003327 Protein phosphatase 1 regulatory subunit 16A (Myosin phosphatase- targeting subunit 3). [Source:Uniprot/SWISSPROT;Acc:Q96I34]
15.9043 -20.6 0.0000284403 500 6 5 10 [+] picture button
TACC2 ENSGACT00000006709 Transforming acidic coiled-coil-containing protein 2 (Anti Zuai-1) (AZU-1). [Source:Uniprot/SWISSPROT;Acc:O95359]
16.7551 -16.81 0.0000295387 810 5 4 8 [+] picture button
IL20RA ENSGACT00000017466 Interleukin-20 receptor alpha chain precursor (IL-20R-alpha) (IL-20R1) (Cytokine receptor family 2 member 8) (Cytokine receptor class-II member 8) (CRF2-8) (ZcytoR7). [Source:Uniprot/SWISSPROT;Acc:Q9UHF4]
16.0118 -16.59 0.000031404 500 5 3 7 [+] picture button
ALDH16A1 ENSGACT00000007898 aldehyde dehydrogenase 16 family, member A1 [Source:RefSeq_peptide;Acc:NP_699160]
15.7969 -17.96 0.0000357755 500 10 1 10 [+] picture button
SMPD1 ENSGACT00000027287 Sphingomyelin phosphodiesterase precursor (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase). [Source:Uniprot/SWISSPROT;Acc:P17405]
15.9043 -17.83 0.0000379578 500 7 1 11 [+] picture button
NP_073574.1 (1 of 2) ENSGACT00000025758 lipid phosphate phosphatase-related protein type 2 [Source:RefSeq_peptide;Acc:NP_073574]
16.3342 -15.99 0.0000531487 500 4 4 5 [+] picture button
BCKDHB ENSGACT00000006917 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial precursor (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase E1 component beta chain) (BCKDH E1-beta). [Source:Uniprot/SWISSPROT;Acc:P21953]
16.3682 -17.71 0.0000573177 434 8 2 11 [+] picture button
STOX2 (1 of 2) ENSGACT00000022446 storkhead box 2 [Source:RefSeq_peptide;Acc:NP_064610]
16.2531 -22.77 0.0000580956 597 3 3 5 [+] picture button
DGCR2 ENSGACT00000022486 Integral membrane protein DGCR2/IDD precursor. [Source:Uniprot/SWISSPROT;Acc:P98153]
15.7334 -12.8 0.0000587034 500 1 1 2 [+] picture button
NR4A2 ENSGACT00000007744 Orphan nuclear receptor NR4A2 (Orphan nuclear receptor NURR1) (Immediate-early response protein NOT) (Transcriptionally-inducible nuclear receptor). [Source:Uniprot/SWISSPROT;Acc:P43354]
15.6576 -12.26 0.0000659411 500 4 3 8 [+] picture button
CDCA4 ENSGACT00000006165 Cell division cycle-associated protein 4 (Hematopoietic progenitor protein). [Source:Uniprot/SWISSPROT;Acc:Q9BXL8]
16.2267 -18.01 0.0000679121 500 7 4 8 [+] picture button
AKR1D1 (2 of 2) ENSGACT00000004792 3-oxo-5-beta-steroid 4-dehydrogenase (EC 1.3.1.3) (Delta(4)-3- ketosteroid 5-beta-reductase) (Aldo-keto reductase family 1 member D1). [Source:Uniprot/SWISSPROT;Acc:P51857]
16.6007 -11.76 0.0000725432 209 4 2 5 [+] picture button
SLC1A1 ENSGACT00000001182 Excitatory amino acid transporter 3 (Solute carrier family 1 member 1) (Sodium-dependent glutamate/aspartate transporter 3) (Excitatory amino-acid carrier 1) (Neuronal and epithelial glutamate transporter). [Source:Uniprot/SWISSPROT;Acc:P43005]
16.5491 -17.2 0.0000736803 500 5 4 13 [+] picture button
CRCP_HUMAN ENSGACT00000027117 Calcitonin gene-related peptide-receptor component protein (CGRP- receptor component protein) (CGRP-RCP) (CGRPRCP). [Source:Uniprot/SWISSPROT;Acc:O75575]
16.2623 -15.42 0.0000766746 521 4 2 5 [+] picture button
NTNG2 ENSGACT00000021180 Netrin-G2 precursor (Laminet-2). [Source:Uniprot/SWISSPROT;Acc:Q96CW9]
16.2912 -11.65 0.0000787098 500 6 2 6 [+] picture button
TUFT1 (2 of 2) ENSGACT00000016096 Tuftelin. [Source:Uniprot/SWISSPROT;Acc:Q9NNX1]
15.4905 -18.59 0.0000795972 830 5 2 8 [+] picture button
YTHDC2 ENSGACT00000024599 YTH domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q9H6S0]
15.4745 -12.13 0.0000803507 500 7 1 8 [+] picture button
CCNG2 (2 of 2) ENSGACT00000018308 Cyclin-G2. [Source:Uniprot/SWISSPROT;Acc:Q16589]
16.4125 -14.99 0.0000804954 500 4 1 7 [+] picture button
TTK ENSGACT00000006951 Dual specificity protein kinase TTK (EC 2.7.12.1) (Phosphotyrosine picked threonine-protein kinase) (PYT). [Source:Uniprot/SWISSPROT;Acc:P33981]
16.2596 -10.85 0.0000887389 156 6 2 10 [+] picture button
CCDC47 ENSGACT00000018162 Coiled-coil domain-containing protein 47 precursor. [Source:Uniprot/SWISSPROT;Acc:Q96A33]
15.5031 -12.47 0.0000887707 447 4 2 6 [+] picture button
ITFG2 ENSGACT00000026535 integrin alpha FG-GAP repeat containing 2 [Source:RefSeq_peptide;Acc:NP_060933]
16.2804 -17.67 0.0000887766 500 2 1 4 [+] picture button
TBC1D4 ENSGACT00000002445 TBC1 domain family member 4 (Akt substrate of 160 kDa) (AS160). [Source:Uniprot/SWISSPROT;Acc:O60343]
15.8127 -14.42 0.0000900678 500 3 3 5 [+] picture button
XRCC2 ENSGACT00000001519 DNA-repair protein XRCC2 (X-ray repair cross-complementing protein 2). [Source:Uniprot/SWISSPROT;Acc:O43543]
16.754 -21.4 0.0000953423 396 5 3 10 [+] picture button
XRCC6 ENSGACT00000006472 ATP-dependent DNA helicase 2 subunit 1 (ATP-dependent DNA helicase II 70 kDa subunit) (Lupus Ku autoantigen protein p70) (Ku70) (70 kDa subunit of Ku antigen) (Thyroid-lupus autoantigen) (TLAA) (CTC box- binding factor 75 kDa subunit) (CTCBF) (CTC75) (DNA [Source:Uniprot/SWISSPROT;Acc:P12956]
16.3092 -16.38 0.000106413 500 8 2 11 [+] picture button
TM7SF4 ENSGACT00000006379 Transmembrane 7 superfamily member 4 (Dendritic cell-specific transmembrane protein) (DC-STAMP) (IL-4-induced protein) (FIND). [Source:Uniprot/SWISSPROT;Acc:Q9H295]
17.1939 -25.51 0.00010725 500 3 2 4 [+] picture button

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Download table: GFF TXT
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