spacer

Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-129

577 hits found.


Page 1 of 12
1 2 3 4 5 6 7 8 9 10 11 .. 12 next >>

Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
picture button picture button picture button picture button picture button picture button picture button picture button picture button picture button
PWP2 ENSGACT00000019742 Periodic tryptophan protein 2 homolog. [Source:Uniprot/SWISSPROT;Acc:Q15269]
17.8514 -17.47 0.000000510233 105 2 3 4 [+] picture button
CHD8 ENSGACT00000018658 Chromodomain-helicase-DNA-binding protein 8 (EC 3.6.1.-) (ATP- dependent helicase CHD8) (CHD-8) (Helicase with SNF2 domain 1). [Source:Uniprot/SWISSPROT;Acc:Q9HCK8]
16.8111 -15.36 0.00000440801 500 4 1 4 [+] picture button
MST1R (1 of 2) ENSGACT00000015940 Macrophage-stimulating protein receptor precursor (EC 2.7.10.1) (MSP receptor) (p185-Ron) (CD136 antigen) (CDw136) [Contains: Macrophage- stimulating protein receptor alpha chain; Macrophage-stimulating protein receptor beta chain]. [Source:Uniprot/SWISSPROT;Acc:Q04912]
17.0864 -17.81 0.00000497005 500 7 1 9 [+] picture button
PTCD2 ENSGACT00000021072 pentatricopeptide repeat domain 2 [Source:RefSeq_peptide;Acc:NP_079030]
16.3733 -9.4 0.00000668764 270 8 2 18 [+] picture button
ENSGACT00000010161 hypothetical protein LOC436664 [Source:RefSeq_peptide;Acc:NP_001002391]hypothetical protein LOC436664 [Source:RefSeq_peptide;Acc:NP_001002391] BY ORTHOLOGY TO:ENSDART00000038556
17.1939 -16.63 0.00000942966 500 8 1 6 [+] picture button
C6orf51 ENSGACT00000016955 Uncharacterized protein C6orf51. [Source:Uniprot/SWISSPROT;Acc:Q969F1]
17.1939 -17.66 0.0000118559 500 4 1 6 [+] picture button
NKX2-3 ENSGACT00000010057 Homeobox protein Nkx-2.3 (Homeobox protein NKX-2.3) (Homeobox protein NK-2 homolog C). [Source:Uniprot/SWISSPROT;Acc:Q8TAU0]
16.5491 -22.35 0.0000130516 500 5 1 8 [+] picture button
SRPX2 ENSGACT00000022957 Sushi repeat-containing protein SRPX2 precursor. [Source:Uniprot/SWISSPROT;Acc:O60687]
19.1021 -21.23 0.0000160522 280 5 3 7 [+] picture button
ENSGACT00000025159 solute carrier family 6 (neurotransmitter transporter, GABA), member 13 [Source:MarkerSymbol;Acc:MGI:95629]solute carrier family 6 (neurotransmitter transporter, GABA), member 13 [Source:MarkerSymbol;Acc:MGI:95629] BY ORTHOLOGY TO:ENSMUST00000064580
16.8715 -19.36 0.0000355403 500 6 1 8 [+] picture button
C5orf14 ENSGACT00000000218 disulfide isomerase [Source:RefSeq_peptide;Acc:NP_078991]
18.761 -16.27 0.0000429124 271 4 1 8 [+] picture button
BCDIN3D ENSGACT00000007506 BCDIN3 domain containing [Source:RefSeq_peptide;Acc:NP_859059]
16.6565 -16.57 0.0000481728 500 4 2 4 [+] picture button
TMEM62 ENSGACT00000014786 Transmembrane protein 62. [Source:Uniprot/SWISSPROT;Acc:Q0P6H9]
17.3013 -19.15 0.0000750817 500 9 2 10 [+] picture button
DOT1L ENSGACT00000016719 Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (DOT1-like protein). [Source:Uniprot/SWISSPROT;Acc:Q8TEK3]
16.5491 -19.29 0.0000795622 500 3 2 3 [+] picture button
TACR2 ENSGACT00000021283 Substance-K receptor (SKR) (Neurokinin A receptor) (NK-2 receptor) (NK-2R) (Tachykinin receptor 2). [Source:Uniprot/SWISSPROT;Acc:P21452]
16.9789 -22.33 0.000104388 500 6 1 7 [+] picture button
CNKSR1 ENSGACT00000012571 Connector enhancer of kinase suppressor of ras 1 (Connector enhancer of KSR1) (hCNK1) (Connector enhancer of KSR-like) (CNK homolog protein 1). [Source:Uniprot/SWISSPROT;Acc:Q969H4]
16.9008 -16.9 0.000109092 500 9 3 10 [+] picture button
PREP ENSGACT00000012436 Prolyl endopeptidase (EC 3.4.21.26) (Post-proline cleaving enzyme) (PE). [Source:Uniprot/SWISSPROT;Acc:P48147]
16.9766 -24.94 0.000114194 490 5 2 7 [+] picture button
DNAL1 ENSGACT00000017474 Dynein light chain 1, axonemal. [Source:Uniprot/SWISSPROT;Acc:Q4LDG9]
18.6473 -17.49 0.000117802 181 4 2 6 [+] picture button
COPB1 ENSGACT00000020669 Coatomer subunit beta (Beta-coat protein) (Beta-COP). [Source:Uniprot/SWISSPROT;Acc:P53618]
17.7377 -18.94 0.000128076 172 4 2 8 [+] picture button
DPEP1 ENSGACT00000020424 Dipeptidase 1 precursor (EC 3.4.13.19) (Microsomal dipeptidase) (Renal dipeptidase) (hRDP) (Dehydropeptidase-I). [Source:Uniprot/SWISSPROT;Acc:P16444]
18.1618 -16.41 0.000146044 500 4 1 6 [+] picture button
ZNF706 ENSGACT00000002588 Zinc finger protein 706. [Source:Uniprot/SWISSPROT;Acc:Q9Y5V0]
16.6565 -14.03 0.000166039 500 7 1 8 [+] picture button
FAM38B ENSGACT00000021992 Protein FAM38B. [Source:Uniprot/SWISSPROT;Acc:Q9H5I5]
17.5162 -22.13 0.000186991 500 5 2 7 [+] picture button
LLGL1 ENSGACT00000018834 Lethal(2) giant larvae protein homolog 1 (LLGL) (Human homolog to the D-lgl gene) (Hugl-1) (DLG4). [Source:Uniprot/SWISSPROT;Acc:Q15334]
16.9534 -23.17 0.0001912 500 3 1 5 [+] picture button
GSS ENSGACT00000005439 Glutathione synthetase (EC 6.3.2.3) (Glutathione synthase) (GSH synthetase) (GSH-S). [Source:Uniprot/SWISSPROT;Acc:P48637]
16.9269 -13.79 0.000198643 500 5 1 8 [+] picture button
PRKDC ENSGACT00000002599 DNA-dependent protein kinase catalytic subunit (EC 2.7.11.1) (DNA-PK catalytic subunit) (DNA-PKcs) (DNPK1) (p460). [Source:Uniprot/SWISSPROT;Acc:P78527]
16.8281 -11.7 0.000230836 188 5 1 5 [+] picture button
SOX3 ENSGACT00000022734 Transcription factor SOX-3. [Source:Uniprot/SWISSPROT;Acc:P41225]
18.4416 -21.82 0.000231825 500 6 4 6 [+] picture button
FLOT1 (1 of 2) ENSGACT00000002470 Flotillin-1. [Source:Uniprot/SWISSPROT;Acc:O75955]
18.3759 -24.58 0.000287171 500 5 1 4 [+] picture button
CCDC86 ENSGACT00000023341 coiled-coil domain containing 86 [Source:RefSeq_peptide;Acc:NP_077003]
16.8417 -17.07 0.000291728 500 5 2 5 [+] picture button
Q4A1L2_GASAC ENSGACT00000008517 Beclin 1. [Source:Uniprot/SPTREMBL;Acc:Q4A1L2]
16.6558 -23.38 0.000309282 648 3 1 3 [+] picture button
CGRRF1 ENSGACT00000007525 Cell growth regulator with RING finger domain protein 1 (Cell growth regulatory gene 19 protein) (RING finger protein 197). [Source:Uniprot/SWISSPROT;Acc:Q99675]
16.8116 -8.78 0.00031536 500 6 2 9 [+] picture button
VPS35 ENSGACT00000018796 Vacuolar protein sorting-associated protein 35 (Vesicle protein sorting 35) (hVPS35) (Maternal-embryonic 3). [Source:Uniprot/SWISSPROT;Acc:Q96QK1]
17.7312 -20.07 0.000334099 500 4 3 5 [+] picture button
GLT8D4 ENSGACT00000015617 glycosyltransferase 8 domain containing 4 [Source:RefSeq_peptide;Acc:NP_001073862]
17.4088 -15.9 0.000334364 500 7 1 9 [+] picture button
MYO7B (1 of 2) ENSGACT00000005007 myosin VIIB [Source:RefSeq_peptide;Acc:NP_001073996]
16.7144 -17.48 0.000337266 250 6 2 10 [+] picture button
KIAA0146 ENSGACT00000023725 Uncharacterized protein KIAA0146. [Source:Uniprot/SWISSPROT;Acc:Q14159]
17.0864 -23.43 0.000365821 500 2 1 3 [+] picture button
LEPRE1 ENSGACT00000014646 Prolyl 3-hydroxylase 1 precursor (EC 1.14.11.7) (Leucine- and proline- enriched proteoglycan 1) (Leprecan-1) (Growth suppressor 1). [Source:Uniprot/SWISSPROT;Acc:Q32P28]
17.7264 -18.79 0.000384063 500 4 1 4 [+] picture button
GTF3C5 ENSGACT00000024006 General transcription factor 3C polypeptide 5 (Transcription factor IIIC-epsilon subunit) (TF3C-epsilon) (TFIIIC 63 kDa subunit) (TFIIIC63). [Source:Uniprot/SWISSPROT;Acc:Q9Y5Q8]
16.6565 -14.97 0.000394505 500 3 1 4 [+] picture button
ATOH8 ENSGACT00000025899 atonal homolog 8 [Source:RefSeq_peptide;Acc:NP_116216]
17.2735 -18.24 0.000395778 500 3 1 5 [+] picture button
PIGO ENSGACT00000024111 GPI ethanolamine phosphate transferase 3 (EC 2.-.-.-) (Phosphatidylinositol-glycan biosynthesis class O protein) (PIG-O). [Source:Uniprot/SWISSPROT;Acc:Q8TEQ8]
16.764 -24.02 0.000402218 500 5 2 9 [+] picture button
EXOC4 ENSGACT00000026109 Exocyst complex component 4 (Exocyst complex component Sec8). [Source:Uniprot/SWISSPROT;Acc:Q96A65]
16.6145 -16.7 0.000412418 500 5 2 4 [+] picture button
FIGN ENSGACT00000007279 Fidgetin. [Source:Uniprot/SWISSPROT;Acc:Q5HY92]
16.5865 -19.43 0.000418925 500 5 10 6 [+] picture button
ENSGACT00000003081 phosphatidylinositol-specific phospholipase C, X domain containing 3 [Source:RefSeq_peptide;Acc:NP_001005473]phosphatidylinositol-specific phospholipase C, X domain containing 3 [Source:RefSeq_peptide;Acc:NP_001005473] BY ORTHOLOGY TO:SINFRUT00000128066
16.9156 -17.25 0.000432019 500 6 2 8 [+] picture button
RBM39 (1 of 2) ENSGACT00000003683 RNA-binding protein 39 (RNA-binding motif protein 39) (RNA-binding region-containing protein 2) (Hepatocellular carcinoma protein 1) (Splicing factor HCC1). [Source:Uniprot/SWISSPROT;Acc:Q14498]
17.9651 -14.71 0.00043206 275 5 1 9 [+] picture button
LIN28B ENSGACT00000012454 Lin-28 homolog B. [Source:Uniprot/SWISSPROT;Acc:Q6ZN17]
17.7168 -15.08 0.000445265 500 4 4 6 [+] picture button
PDE6C ENSGACT00000008934 Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha' (EC 3.1.4.35) (cGMP phosphodiesterase 6C). [Source:Uniprot/SWISSPROT;Acc:P51160]
16.8005 -24.85 0.000449282 500 7 1 12 [+] picture button
NEK9 ENSGACT00000010147 Serine/threonine-protein kinase Nek9 (EC 2.7.11.1) (NimA-related protein kinase 9) (Never in mitosis A-related kinase 9) (Nercc1 kinase) (NIMA-related kinase 8) (Nek8). [Source:Uniprot/SWISSPROT;Acc:Q8TD19]
17.7619 -16.94 0.000459693 500 4 3 5 [+] picture button
CFI ENSGACT00000000469 Complement factor I precursor (EC 3.4.21.45) (C3B/C4B inactivator) [Contains: Complement factor I heavy chain; Complement factor I light chain]. [Source:Uniprot/SWISSPROT;Acc:P05156]
16.7144 -9.12 0.000459853 166 4 1 6 [+] picture button
SEMA3G ENSGACT00000007804 Semaphorin-3G precursor (Semaphorin sem2). [Source:Uniprot/SWISSPROT;Acc:Q9NS98]
16.6034 -12.36 0.000473755 500 5 1 6 [+] picture button
KCNN4 ENSGACT00000010003 Intermediate conductance calcium-activated potassium channel protein 4 (SK4) (KCa4) (IK1) (IKCa1) (Putative Gardos channel). [Source:Uniprot/SWISSPROT;Acc:O15554]
16.6034 -11.31 0.000478685 500 6 1 9 [+] picture button
POP5 ENSGACT00000016827 Ribonuclease P/MRP protein subunit POP5 (EC 3.1.26.5) (hPop5). [Source:Uniprot/SWISSPROT;Acc:Q969H6]
16.5491 -15.17 0.000491834 500 5 2 7 [+] picture button
OSGIN1 ENSGACT00000004702 Oxidative stress induced growth inhibitor 1 (Pregnancy-induced growth inhibitor OKL38) (huOKL38) (Ovary, kidney and liver protein 38). [Source:Uniprot/SWISSPROT;Acc:Q9UJX0]
16.5491 -14.67 0.000491834 500 3 1 3 [+] picture button
GNE ENSGACT00000024646 Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase (UDP-GlcNAc-2-epimerase/ManAc kinase) [Includes: UDP-N- acetylglucosamine 2-epimerase (EC 5.1.3.14) (Uridine diphosphate-N- acetylglucosamine-2-epimerase) (UDP-GlcNAc-2-epimerase) [Source:Uniprot/SWISSPROT;Acc:Q9Y223]
16.5491 -17.58 0.000491834 500 5 1 7 [+] picture button

Page 1 of 12
1 2 3 4 5 6 7 8 9 10 11 .. 12 next >>

Download table: GFF TXT
spacer
spacer