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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-125a

976 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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LNPEP ENSGACT00000012974 Leucyl-cystinyl aminopeptidase (EC 3.4.11.3) (Cystinyl aminopeptidase) (Oxytocinase) (OTase) (Insulin-regulated membrane aminopeptidase) (Insulin-responsive aminopeptidase) (IRAP) (Placental leucine aminopeptidase) (P-LAP). [Source:Uniprot/SWISSPROT;Acc:Q9UIQ6]
15.0446 -14.93 1.50361e-11 500 5 9 7 [+] picture button
PRDM1 (1 of 2) ENSGACT00000002269 PR domain zinc finger protein 1 (PR domain-containing protein 1) (Beta-interferon gene positive-regulatory domain I-binding factor) (BLIMP-1) (Positive regulatory domain I-binding factor 1) (PRDI- binding factor 1) (PRDI-BF1). [Source:Uniprot/SWISSPROT;Acc:O75626]
15.9043 -20.36 2.11808e-10 500 8 5 9 [+] picture button
TRIM71 ENSGACT00000011014 Tripartite motif-containing protein 71 (Lin-41 homolog). [Source:Uniprot/SWISSPROT;Acc:Q2Q1W2]
17.1734 -19.93 8.95597e-09 500 8 4 7 [+] picture button
EIF2C2 ENSGACT00000009082 Eukaryotic translation initiation factor 2C 2 (eIF2C 2) (eIF-2C 2) (Argonaute-2) (Slicer protein) (PAZ Piwi domain protein) (PPD). [Source:Uniprot/SWISSPROT;Acc:Q9UKV8]
16.7642 -24.99 5.11528e-08 500 6 2 6 [+] picture button
SMEK1 ENSGACT00000012211 SMEK homolog 1. [Source:Uniprot/SWISSPROT;Acc:Q6IN85]
15.9429 -16.45 2.76221e-07 500 11 4 10 [+] picture button
KIAA1772 ENSGACT00000022921 cDNA sequence AK220484 [Source:MarkerSymbol;Acc:MGI:3576497]cDNA sequence AK220484 [Source:MarkerSymbol;Acc:MGI:3576497] BY ORTHOLOGY TO:ENSRNOT00000033468
16.6202 -19.8 3.03514e-07 500 8 1 11 [+] picture button
HS3ST6 ENSGACT00000015746 Heparan sulfate glucosamine 3-O-sulfotransferase 6 (EC 2.8.2.23) (Heparan sulfate D-glucosaminyl 3-O-sulfotransferase 6) (Heparan sulfate 3-O-sulfotransferase 6) (h3-OST-6). [Source:Uniprot/SWISSPROT;Acc:Q96QI5]
17.6237 -26 4.16773e-07 500 6 1 7 [+] picture button
PSEN1 ENSGACT00000007073 Presenilin-1 (EC 3.4.23.-) (PS-1) (Protein S182) [Contains: Presenilin-1 NTF subunit; Presenilin-1 CTF subunit; Presenilin-1 CTF12 (PS1-CTF12)]. [Source:Uniprot/SWISSPROT;Acc:P49768]
15.8844 -23.45 4.26237e-07 500 3 3 4 [+] picture button
ENSGACT00000015629 Homolog of Brachydanio rerio "Par1 protein. [Source:Uniprot/SPTREMBL;Acc:Q6NYA3]"Homolog of Brachydanio rerio "Par1 protein. [Source:Uniprot/SPTREMBL;Acc:Q6NYA3]" BY ORTHOLOGY TO:SINFRUT00000130329
16.4774 -16.52 5.51799e-07 500 6 4 8 [+] picture button
PCTP ENSGACT00000019065 Phosphatidylcholine transfer protein (PC-TP) (StAR-related lipid transfer protein 2) (StARD2) (START domain-containing protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9UKL6]
15.6124 -16.37 8.20266e-07 500 6 1 8 [+] picture button
ENSGACT00000002056 NOT ANNOTATED
15.4934 -18.27 1e-06 358 5 1 2 [+] picture button
KIAA1622 ENSGACT00000018074 HEAT-like repeat-containing protein isoform 1 [Source:RefSeq_peptide;Acc:NP_478144]
17.7312 -24.75 1e-06 500 10 1 10 [+] picture button
ITGA9 ENSGACT00000007103 Integrin alpha-9 precursor (Integrin alpha-RLC). [Source:Uniprot/SWISSPROT;Acc:Q13797]
15.9925 -13.66 1.07257e-06 500 9 6 10 [+] picture button
SOS2 ENSGACT00000015641 Son of sevenless homolog 2 (SOS-2). [Source:Uniprot/SWISSPROT;Acc:Q07890]
16.4896 -18.42 1.43723e-06 500 3 3 5 [+] picture button
PIGT ENSGACT00000009219 GPI transamidase component PIG-T precursor (Phosphatidylinositol- glycan biosynthesis class T protein). [Source:Uniprot/SWISSPROT;Acc:Q969N2]
15.0511 -18.85 2.55419e-06 475 6 2 9 [+] picture button
NT5C ENSGACT00000007363 5'(3')-deoxyribonucleotidase, cytosolic type (EC 3.1.3.-) (Cytosolic 5',3'-pyrimidine nucleotidase) (Deoxy-5'-nucleotidase 1) (dNT-1). [Source:Uniprot/SWISSPROT;Acc:Q8TCD5]
15.0446 -18.27 2.7176e-06 500 7 2 9 [+] picture button
GALNTL4 (1 of 2) ENSGACT00000020763 Putative polypeptide N-acetylgalactosaminyltransferase-like protein 4 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase-like protein 4) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase- like protein 4) (Polypeptide GalNAc transferase-lik [Source:Uniprot/SWISSPROT;Acc:Q6P9A2]
17.379 -19.96 2.7426e-06 570 10 5 9 [+] picture button
PNKP ENSGACT00000007848 Bifunctional polynucleotide phosphatase/kinase (Polynucleotide kinase- 3'-phosphatase) (DNA 5'-kinase/3'-phosphatase) [Includes: Polynucleotide 3'-phosphatase (EC 3.1.3.32) (2'(3')-polynucleotidase); Polynucleotide 5'-hydroxyl-kinase (EC 2.7.1.78)]. [Source:Uniprot/SWISSPROT;Acc:Q96T60]
16.487 -17.17 4.25639e-06 203 4 3 4 [+] picture button
MFSD3 ENSGACT00000015301 Major facilitator superfamily domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q96ES6]
15.5819 -14.59 5.06375e-06 500 7 2 5 [+] picture button
THOC6 ENSGACT00000019485 THO complex subunit 6 homolog (WD repeat protein 58). [Source:Uniprot/SWISSPROT;Acc:Q86W42]
15.9354 -20.16 6.51664e-06 500 3 1 2 [+] picture button
SOX7 ENSGACT00000014326 Transcription factor SOX-7. [Source:Uniprot/SWISSPROT;Acc:Q9BT81]
16.4283 -24.75 7.25204e-06 716 2 5 2 [+] picture button
TIMM17B ENSGACT00000016066 Mitochondrial import inner membrane translocase subunit Tim17-B. [Source:Uniprot/SWISSPROT;Acc:O60830]
15.9298 -18.98 8.72565e-06 346 9 3 15 [+] picture button
IDE ENSGACT00000003885 Insulin-degrading enzyme (EC 3.4.24.56) (Insulysin) (Insulinase) (Insulin protease). [Source:Uniprot/SWISSPROT;Acc:P14735]
18.3792 -27.34 1.1119e-05 500 7 1 11 [+] picture button
GEMIN8 ENSGACT00000019291 Gem-associated protein 8 (Protein FAM51A1). [Source:Uniprot/SWISSPROT;Acc:Q9NWZ8]
15.5158 -19.35 1.26029e-05 402 6 2 7 [+] picture button
WDR21C ENSGACT00000017233 WD repeat protein 21C. [Source:Uniprot/SWISSPROT;Acc:Q8NA75]
17.1712 -23.21 1.31302e-05 414 6 1 6 [+] picture button
LIN7C ENSGACT00000020488 Lin-7 homolog C (Lin-7C) (Mammalian lin-seven protein 3) (MALS-3) (Vertebrate lin-7 homolog 3) (Veli-3 protein). [Source:Uniprot/SWISSPROT;Acc:Q9NUP9]
16.7346 -18.41 1.36721e-05 500 8 5 16 [+] picture button
USP47 ENSGACT00000020802 Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.1.2.15) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47) (Deubiquitinating enzyme 47). [Source:Uniprot/SWISSPROT;Acc:Q96K76]
15.0446 -25.11 1.46563e-05 500 10 10 17 [+] picture button
FKBP10 (1 of 2) ENSGACT00000008385 FK506-binding protein 10 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis- trans isomerase) (PPIase) (Rotamase) (65 kDa FK506-binding protein) (FKBP65) (Immunophilin FKBP65). [Source:Uniprot/SWISSPROT;Acc:Q96AY3]
17.8514 -18.38 1.61845e-05 223 3 3 4 [+] picture button
RTCD1 ENSGACT00000017884 RNA 3'-terminal phosphate cyclase (EC 6.5.1.4) (RNA-3'-phosphate cyclase) (RNA cyclase). [Source:Uniprot/SWISSPROT;Acc:O00442]
18.1925 -19.1 1.6277e-05 97 4 4 5 [+] picture button
KIAA0020 ENSGACT00000023674 KIAA0020 (KIAA0020), mRNA [Source:RefSeq_dna;Acc:NM_014878]
16.4416 -28.43 1.65665e-05 500 5 1 5 [+] picture button
TMEM166 ENSGACT00000012253 Transmembrane protein 166. [Source:Uniprot/SWISSPROT;Acc:Q9H8M9]
15.691 -16.84 1.69e-05 500 3 1 3 [+] picture button
ENSGACT00000020067 Homolog of Homo sapiens "Lymphocyte antigen 75 precursor [Source:IPI;Acc:IPI00027381]"Homolog of Homo sapiens "Lymphocyte antigen 75 precursor [Source:IPI;Acc:IPI00027381]" BY ORTHOLOGY TO:SINFRUT00000171652
17.3815 -16.85 1.86618e-05 500 5 4 6 [+] picture button
MGAT5B (2 of 2) ENSGACT00000017779 beta(1,6)-N-acetylglucosaminyltransferase V isoform 1 [Source:RefSeq_peptide;Acc:NP_653278]
17.4398 -22.59 1.95439e-05 391 8 4 11 [+] picture button
NP_001032755.1 ENSGACT00000018693 CDNA FLJ31025 fis, clone HLUNG2000501. [Source:Uniprot/SPTREMBL;Acc:Q96ND9]
16.7494 -17.47 2.15567e-05 586 6 2 6 [+] picture button
PELI2 ENSGACT00000016886 Protein pellino homolog 2 (Pellino-2). [Source:Uniprot/SWISSPROT;Acc:Q9HAT8]
15.0446 -14.26 2.41292e-05 500 7 2 13 [+] picture button
PARN ENSGACT00000025830 Poly(A)-specific ribonuclease PARN (EC 3.1.13.4) (Polyadenylate- specific ribonuclease) (Deadenylating nuclease) (Deadenylation nuclease). [Source:Uniprot/SWISSPROT;Acc:O95453]
15.8262 -20.49 2.43237e-05 728 6 2 6 [+] picture button
HAGH ENSGACT00000015742 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) (Glyoxalase II) (GLX II). [Source:Uniprot/SWISSPROT;Acc:Q16775]
16.6438 -20.69 2.45629e-05 396 5 1 6 [+] picture button
PTK7 ENSGACT00000005309 Tyrosine-protein kinase-like 7 precursor (Colon carcinoma kinase 4) (CCK-4). [Source:Uniprot/SWISSPROT;Acc:Q13308]
15.6044 -17.96 2.49256e-05 500 7 3 6 [+] picture button
USP46 ENSGACT00000018813 Ubiquitin carboxyl-terminal hydrolase 46 (EC 3.1.2.15) (Ubiquitin thioesterase 46) (Ubiquitin-specific-processing protease 46) (Deubiquitinating enzyme 46). [Source:Uniprot/SWISSPROT;Acc:P62068]
15.7007 -23.55 2.65376e-05 500 6 2 10 [+] picture button
SNX15 ENSGACT00000026148 Sorting nexin-15. [Source:Uniprot/SWISSPROT;Acc:Q9NRS6]
16.8281 -17.88 2.7097e-05 274 5 4 8 [+] picture button
NP_938204.1 ENSGACT00000003318 c-Maf-inducing protein C-mip isoform [Source:RefSeq_peptide;Acc:NP_938204]
15.6097 -15.86 2.71655e-05 500 4 2 7 [+] picture button
AARS2 ENSGACT00000026465 Probable alanyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.7) (Alanine--tRNA ligase) (AlaRS) (Alanyl-tRNA synthetase-like). [Source:Uniprot/SWISSPROT;Acc:Q5JTZ9]
15.4745 -20.25 2.94268e-05 500 5 2 6 [+] picture button
TJAP1 ENSGACT00000016244 Tight junction-associated protein 1 (Tight junction protein 4) (Protein incorporated later into tight junctions). [Source:Uniprot/SWISSPROT;Acc:Q5JTD0]
15.2217 -18.85 3.26172e-05 500 7 5 10 [+] picture button
C11orf60 ENSGACT00000001469 UPF0360 protein C11orf60. [Source:Uniprot/SWISSPROT;Acc:Q9NQC8]
15.1696 -19.13 3.47286e-05 500 6 1 5 [+] picture button
DNAH2 ENSGACT00000016424 dynein heavy chain domain 3 [Source:RefSeq_peptide;Acc:NP_065928]
15.1878 -16.6 3.95899e-05 500 7 2 12 [+] picture button
KLHL30 ENSGACT00000004824 Kelch-like protein 30. [Source:Uniprot/SWISSPROT;Acc:Q0D2K2]
15.9185 -18.76 4.6262e-05 275 6 2 13 [+] picture button
SLC27A2 (3 of 3) ENSGACT00000008244 Very-long-chain acyl-CoA synthetase (EC 6.2.1.-) (VLCS) (Very-long- chain-fatty-acid-CoA ligase) (VLACS) (THCA-CoA ligase) (Fatty-acid- coenzyme A ligase, very long-chain 1) (Long-chain-fatty-acid--CoA ligase) (EC 6.2.1.3) (Fatty acid transport protein 2) [Source:Uniprot/SWISSPROT;Acc:O14975]
17.1349 -17.33 4.78028e-05 500 5 1 6 [+] picture button
SLC4A3 ENSGACT00000003278 Anion exchange protein 3 (Neuronal band 3-like protein) (Solute carrier family 4 member 3) (Cardiac/brain band 3-like protein) (CAE3/BAE3). [Source:Uniprot/SWISSPROT;Acc:P48751]
15.1521 -17.92 4.97515e-05 500 8 3 12 [+] picture button
SCO2 ENSGACT00000000824 SCO2 protein homolog, mitochondrial precursor. [Source:Uniprot/SWISSPROT;Acc:O43819]
15.367 -21.91 5.4897e-05 500 3 1 3 [+] picture button
NLRX1 ENSGACT00000006646 NLR family member X1 isoform 1 [Source:RefSeq_peptide;Acc:NP_078894]
16.487 -19.86 5.85278e-05 308 8 2 13 [+] picture button

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Download table: GFF TXT
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