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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-122

717 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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MON2 ENSGACT00000004759 MON2 homolog [Source:RefSeq_peptide;Acc:NP_055841]
18.4121 -21.62 0.0000000104683 500 5 12 7 [+] picture button
BCAT2 ENSGACT00000019419 Branched-chain-amino-acid aminotransferase, mitochondrial precursor (EC 2.6.1.42) (BCAT(m)) (Placental protein 18) (PP18). [Source:Uniprot/SWISSPROT;Acc:O15382]
16.4702 -21.43 0.0000000156291 500 6 1 7 [+] picture button
GPR172A ENSGACT00000003358 Porcine endogenous retrovirus A receptor 1 precursor (PERV-A receptor 1) (Protein GPR172A). [Source:Uniprot/SWISSPROT;Acc:Q9HAB3]
16.1005 -16.45 0.000000257474 500 3 1 3 [+] picture button
PTPRG (1 of 2) ENSGACT00000001788 Receptor-type tyrosine-protein phosphatase gamma precursor (EC 3.1.3.48) (Protein-tyrosine phosphatase gamma) (R-PTP-gamma). [Source:Uniprot/SWISSPROT;Acc:P23470]
16.3878 -20.1 0.00000149358 500 5 12 10 [+] picture button
SIRT6 ENSGACT00000020235 Mono-ADP-ribosyltransferase sirtuin-6 (EC 2.4.2.31) (SIR2-like protein 6). [Source:Uniprot/SWISSPROT;Acc:Q8N6T7]
17.6582 -24.77 0.0000016922 500 5 2 8 [+] picture button
GTF2B ENSGACT00000020759 Transcription initiation factor IIB (General transcription factor TFIIB) (S300-II). [Source:Uniprot/SWISSPROT;Acc:Q00403]
16.9162 -17.83 0.00000344651 363 8 5 11 [+] picture button
ST6GAL1 ENSGACT00000027590 CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,6-sialyltransferase (EC 2.4.99.1) (Beta-galactoside alpha-2,6-sialyltransferase) (Alpha 2,6-ST) (Sialyltransferase 1) (ST6Gal I) (B-cell antigen CD75). [Source:Uniprot/SWISSPROT;Acc:P15907]
16.9642 -20.02 0.00000656818 500 8 1 13 [+] picture button
C1orf58 ENSGACT00000005774 Uncharacterized protein C1orf58. [Source:Uniprot/SPTREMBL;Acc:Q5VW32]
16.3342 -19.24 0.000010769 500 8 2 12 [+] picture button
AP3S1 ENSGACT00000008224 AP-3 complex subunit sigma-1 (Adapter-related protein complex 3 sigma- 1 subunit) (Sigma-adaptin 3a) (AP-3 complex sigma-3A subunit) (Sigma- 3A-adaptin) (Clathrin-associated/assembly/adapter protein, small 3). [Source:Uniprot/SWISSPROT;Acc:Q92572]
16.1083 -13.96 0.0000109876 684 6 1 9 [+] picture button
ENSGACT00000010311 Homolog of Gallus gallus "Occludin. [Source:Uniprot/SWISSPROT;Acc:Q91049]"Homolog of Gallus gallus "Occludin. [Source:Uniprot/SWISSPROT;Acc:Q91049]" BY ORTHOLOGY TO:SINFRUT00000178585
18.5421 -25.38 0.0000127136 500 6 3 8 [+] picture button
ME3 ENSGACT00000004239 NADP-dependent malic enzyme, mitochondrial precursor (EC 1.1.1.40) (NADP-ME) (Malic enzyme 3). [Source:Uniprot/SWISSPROT;Acc:Q16798]
17.8386 -19.01 0.0000162093 500 5 2 4 [+] picture button
VPS37B ENSGACT00000006892 vacuolar protein sorting 37B [Source:RefSeq_peptide;Acc:NP_078943]
16.481 -18.82 0.0000192342 500 5 1 9 [+] picture button
RPS6KC1 ENSGACT00000013427 Ribosomal protein S6 kinase delta-1 (EC 2.7.11.1) (52 kDa ribosomal protein S6 kinase) (Ribosomal S6 kinase-like protein with two PSK domains 118 kDa protein) (SPHK1-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q96S38]
17.3013 -24.08 0.0000194809 500 9 2 15 [+] picture button
H2AFY2 ENSGACT00000019305 Core histone macro-H2A.2 (Histone macroH2A2) (mH2A2). [Source:Uniprot/SWISSPROT;Acc:Q9P0M6]
17.1631 -13.84 0.0000194841 358 6 3 12 [+] picture button
MTMR2 ENSGACT00000026985 Myotubularin-related protein 2 (EC 3.1.3.-). [Source:Uniprot/SWISSPROT;Acc:Q13614]
16.3342 -22.47 0.0000371383 500 8 3 11 [+] picture button
ENSGACT00000022419 conserved hypothetical proteinconserved hypothetical protein BY ORTHOLOGY TO:AAEL000182-RA
19.2158 -24.93 0.0000371394 254 2 1 2 [+] picture button
HACE1 ENSGACT00000018690 E3 ubiquitin-protein ligase HACE1 (EC 6.3.2.-) (HECT domain and ankyrin repeat-containing E3 ubiquitin-protein ligase 1). [Source:Uniprot/SWISSPROT;Acc:Q8IYU2]
17.8514 -22.68 0.0000496661 236 7 3 11 [+] picture button
C11orf58 ENSGACT00000008865 Small acidic protein. [Source:Uniprot/SWISSPROT;Acc:O00193]
17.0127 -15.48 0.0000508835 388 5 2 6 [+] picture button
SLC25A2 ENSGACT00000027017 Mitochondrial ornithine transporter 2 (Solute carrier family 25 member 2). [Source:Uniprot/SWISSPROT;Acc:Q9BXI2]
17.0813 -19.47 0.0000513352 500 3 1 6 [+] picture button
SLC13A3 ENSGACT00000015626 Solute carrier family 13 member 3 (Sodium-dependent high-affinity dicarboxylate transporter 2) (Na(+)/dicarboxylate cotransporter 3) (NaDC-3) (hNaDC3). [Source:Uniprot/SWISSPROT;Acc:Q8WWT9]
17.6427 -20.88 0.0000630503 621 5 1 5 [+] picture button
PCDH11Y ENSGACT00000023428 Protocadherin-11 Y-linked precursor (Protocadherin-11) (Protocadherin- 22) (Protocadherin on the Y chromosome) (PCDH-Y) (Protocadherin prostate cancer) (Protocadherin-PC). [Source:Uniprot/SWISSPROT;Acc:Q9BZA8]
16.1508 -17.97 0.0000702934 500 7 2 9 [+] picture button
ENSGACT00000011532 NOT ANNOTATED
17.6684 -18.18 0.0000755197 368 5 1 3 [+] picture button
ADPGK ENSGACT00000009611 ADP-dependent glucokinase (EC 2.7.1.147) (ADPGK) (ADP-GK) (RbBP-35). [Source:Uniprot/SWISSPROT;Acc:Q9BRR6]
16.6565 -15.16 0.0000837701 500 9 3 8 [+] picture button
XRN2 ENSGACT00000015741 5'-3' exoribonuclease 2 (EC 3.1.13.-) (DHM1-like protein) (DHP protein). [Source:Uniprot/SWISSPROT;Acc:Q9H0D6]
16.9045 -12.9 0.0000858414 500 6 1 7 [+] picture button
CYP20A1 ENSGACT00000019861 cytochrome P450, family 20, subfamily A, polypeptide 1 [Source:RefSeq_peptide;Acc:NP_803882]
16.2872 -18.23 0.0000883851 511 7 4 11 [+] picture button
NP_001005472.1 ENSGACT00000007986 similar to Laminin receptor 1 (LOC388524), mRNA [Source:RefSeq_dna;Acc:NM_001005472]
16.5491 -17.18 0.0000908249 500 6 1 7 [+] picture button
INTS6 ENSGACT00000000322 Integrator complex subunit 6 (Int6) (Protein deleted in cancer 1) (Protein DDX26) (DBI-1) (Deleted in cancer 1) (DICE1). [Source:Uniprot/SWISSPROT;Acc:Q9UL03]
17.2087 -21.57 0.000101798 500 6 1 6 [+] picture button
ENSGACT00000010538 Homolog of Brachydanio rerio "Kinectin 1. [Source:Uniprot/SPTREMBL;Acc:Q6TEN8]"Homolog of Brachydanio rerio "Kinectin 1. [Source:Uniprot/SPTREMBL;Acc:Q6TEN8]" BY ORTHOLOGY TO:SINFRUT00000139660
16.1722 -19.53 0.000122219 500 2 2 2 [+] picture button
ENSGACT00000000770 NOT ANNOTATED
18.161 -21.94 0.000128219 500 6 1 5 [+] picture button
RALA ENSGACT00000006594 Ras-related protein Ral-A precursor. [Source:Uniprot/SWISSPROT;Acc:P11233]
17.6237 -20.16 0.000133008 500 4 3 5 [+] picture button
ANKMY1 ENSGACT00000008605 Ankyrin repeat and MYND domain-containing protein 1 (Testis-specific ankyrin-like protein 1) (Zinc-finger MYND domain-containing protein 13). [Source:Uniprot/SWISSPROT;Acc:Q9P2S6]
18.2685 -27.68 0.000134872 500 4 1 8 [+] picture button
SMYD4 ENSGACT00000027190 SET and MYND domain-containing protein 4. [Source:Uniprot/SWISSPROT;Acc:Q8IYR2]
16.3342 -19.74 0.000168937 500 7 1 7 [+] picture button
DDX5 (1 of 2) ENSGACT00000009367 Probable ATP-dependent RNA helicase DDX5 (EC 3.6.1.-) (DEAD box protein 5) (RNA helicase p68). [Source:Uniprot/SWISSPROT;Acc:P17844]
17.0555 -16.08 0.000169859 297 8 4 17 [+] picture button
MYEF2 ENSGACT00000022170 Myelin expression factor 2 (MyEF-2) (MST156). [Source:Uniprot/SWISSPROT;Acc:Q9P2K5]
16.8281 -21.39 0.000176823 189 4 5 7 [+] picture button
ZMYM2 ENSGACT00000001771 MYM-type zinc finger protein 2 (Zinc finger protein 198) (Fused in myeloproliferative disorders protein) (Rearranged in atypical myeloproliferative disorder protein). [Source:Uniprot/SWISSPROT;Acc:Q9UBW7]
18.1209 -21.75 0.000183553 500 4 1 6 [+] picture button
RRAGB ENSGACT00000026935 Ras-related GTP-binding protein B (Rag B) (RagB). [Source:Uniprot/SWISSPROT;Acc:Q5VZM2]
16.258 -18.65 0.000197265 384 8 2 8 [+] picture button
MTTP ENSGACT00000023640 Microsomal triglyceride transfer protein large subunit precursor. [Source:Uniprot/SWISSPROT;Acc:P55157]
16.1766 -19.49 0.00020656 669 6 4 9 [+] picture button
PLA2G7 ENSGACT00000006470 Platelet-activating factor acetylhydrolase precursor (EC 3.1.1.47) (PAF acetylhydrolase) (PAF 2-acylhydrolase) (LDL-associated phospholipase A2) (LDL-PLA(2)) (2-acetyl-1-alkylglycerophosphocholine esterase) (1-alkyl-2-acetylglycerophosphocholine esterase) [Source:Uniprot/SWISSPROT;Acc:Q13093]
16.2267 -14.99 0.000232895 500 4 1 4 [+] picture button
PQLC3 ENSGACT00000016971 PQ loop repeat-containing protein 3 precursor. [Source:Uniprot/SWISSPROT;Acc:Q8N755]
16.9382 -21.42 0.000240737 500 7 1 10 [+] picture button
ANKS1B ENSGACT00000026269 cajalin 2 isoform a [Source:RefSeq_peptide;Acc:NP_690001]
17.3013 -21.31 0.000247581 500 2 2 2 [+] picture button
FOXP4 ENSGACT00000000471 Forkhead box protein P4 (Fork head-related protein-like A). [Source:Uniprot/SWISSPROT;Acc:Q8IVH2]
16.6789 -21.77 0.000255192 500 6 3 6 [+] picture button
BNIP3L (2 of 2) ENSGACT00000015065 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like (NIP3L) (NIP3-like protein X) (BCL2/adenovirus E1B 19 kDa protein-interacting protein 3A) (Adenovirus E1B19K-binding protein B5). [Source:Uniprot/SWISSPROT;Acc:O60238]
18.1925 -17.63 0.000257156 212 6 2 10 [+] picture button
THRAP4 ENSGACT00000011303 Thyroid hormone receptor-associated protein complex 100 kDa component (Trap100) (Thyroid hormone receptor-associated protein 4) (Vitamin D3 receptor-interacting protein complex component DRIP100) (Activator- recruited cofactor 100 kDa component) (ARC100). [Source:Uniprot/SWISSPROT;Acc:O75448]
16.487 -15.87 0.00027975 119 5 1 5 [+] picture button
PRDX4 ENSGACT00000027397 Peroxiredoxin-4 (EC 1.11.1.15) (Prx-IV) (Thioredoxin peroxidase AO372) (Thioredoxin-dependent peroxide reductase A0372) (Antioxidant enzyme AOE372) (AOE37-2). [Source:Uniprot/SWISSPROT;Acc:Q13162]
16.6928 -25.08 0.000307414 500 5 1 4 [+] picture button
TNNI1 (2 of 2) ENSGACT00000012865 Troponin I, slow skeletal muscle (Troponin I, slow-twitch isoform). [Source:Uniprot/SWISSPROT;Acc:P19237]
16.5491 -21.62 0.000318537 500 8 2 10 [+] picture button
CCNG1 ENSGACT00000024067 Cyclin-G1 (Cyclin-G). [Source:Uniprot/SWISSPROT;Acc:P51959]
16.7603 -18.49 0.000327146 500 5 1 6 [+] picture button
EFNA3 (2 of 2) ENSGACT00000005992 Ephrin-A3 precursor (EPH-related receptor tyrosine kinase ligand 3) (LERK-3) (EHK1 ligand) (EHK1-L) (EFL-2). [Source:Uniprot/SWISSPROT;Acc:P52797]
18.0374 -18.81 0.000356775 500 6 2 8 [+] picture button
ACO2 (2 of 2) ENSGACT00000006312 Aconitate hydratase, mitochondrial precursor (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase). [Source:Uniprot/SWISSPROT;Acc:Q99798]
16.6565 -20.09 0.000366996 500 9 1 10 [+] picture button
VDAC1 ENSGACT00000027664 Voltage-dependent anion-selective channel protein 1 (VDAC-1) (hVDAC1) (Outer mitochondrial membrane protein porin 1) (Plasmalemmal porin) (Porin 31HL) (Porin 31HM). [Source:Uniprot/SWISSPROT;Acc:P21796]
16.9879 -19.26 0.00038219 500 3 1 3 [+] picture button
ACAT1 ENSGACT00000026716 Acetyl-CoA acetyltransferase, mitochondrial precursor (EC 2.3.1.9) (Acetoacetyl-CoA thiolase) (T2). [Source:Uniprot/SWISSPROT;Acc:P24752]
17.7377 -23.8 0.000384405 254 5 3 5 [+] picture button

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Download table: GFF TXT
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