spacer

Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-10d

974 hits found.


Page 1 of 20
1 2 3 4 5 6 7 8 9 10 11 .. 20 next >>

Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
picture button picture button picture button picture button picture button picture button picture button picture button picture button picture button
HOXA3 ENSGACT00000009419 Homeobox protein Hox-A3 (Hox-1E). [Source:Uniprot/SWISSPROT;Acc:O43365]
15.4688 -15.55 9.09035e-09 500 6 9 12 [+] picture button
POP4 ENSGACT00000019189 Ribonuclease P protein subunit p29 (EC 3.1.26.5) (hPOP4). [Source:Uniprot/SWISSPROT;Acc:O95707]
16.0173 -20.53 5.46346e-08 563 5 1 6 [+] picture button
WNT9A ENSGACT00000023074 Protein Wnt-9a precursor (Wnt-14). [Source:Uniprot/SWISSPROT;Acc:O14904]
16.3769 -23.63 4.45552e-07 500 5 5 10 [+] picture button
HOXD10 ENSGACT00000006039 Homeobox protein Hox-D10 (Hox-4D) (Hox-4E). [Source:Uniprot/SWISSPROT;Acc:P28358]
16.8549 -17.83 7.2834e-07 500 6 8 7 [+] picture button
WDR1 ENSGACT00000012063 WD repeat protein 1 (Actin-interacting protein 1) (AIP1) (NORI-1). [Source:Uniprot/SWISSPROT;Acc:O75083]
15.2421 -18.91 1.83506e-06 109 4 3 5 [+] picture button
DVL2 ENSGACT00000025606 Segment polarity protein dishevelled homolog DVL-2 (Dishevelled-2) (DSH homolog 2). [Source:Uniprot/SWISSPROT;Acc:O14641]
17.2552 -23.08 2.30842e-06 500 3 5 4 [+] picture button
TRAIP ENSGACT00000015985 TRAF-interacting protein (RING finger protein 206). [Source:Uniprot/SWISSPROT;Acc:Q9BWF2]
15.8599 -18.4 3.05883e-06 500 5 1 6 [+] picture button
RBM12 ENSGACT00000005545 Copine-1 (Copine I). [Source:Uniprot/SWISSPROT;Acc:Q99829]
15.6888 -18.84 3.7879e-06 500 7 6 8 [+] picture button
PC ENSGACT00000026135 Pyruvate carboxylase, mitochondrial precursor (EC 6.4.1.1) (Pyruvic carboxylase) (PCB). [Source:Uniprot/SWISSPROT;Acc:P11498]
15.5828 -13.67 5.6613e-06 500 3 2 3 [+] picture button
GRIN2B (2 of 2) ENSGACT00000021128 Glutamate [NMDA] receptor subunit epsilon-2 precursor (N-methyl D- aspartate receptor subtype 2B) (NR2B) (NMDAR2B) (N-methyl-D-aspartate receptor subunit 3) (NR3) (hNR3). [Source:Uniprot/SWISSPROT;Acc:Q13224]
16.4256 -19.99 6.36988e-06 500 3 5 6 [+] picture button
MARK2 ENSGACT00000026267 Serine/threonine-protein kinase MARK2 (EC 2.7.11.1) (MAP/microtubule affinity-regulating kinase 2) (ELKL motif kinase) (EMK1) (PAR1 homolog). [Source:Uniprot/SWISSPROT;Acc:Q7KZI7]
15.5896 -14.57 6.69419e-06 500 5 4 8 [+] picture button
ENSGACT00000015778 Homolog of Sphoeroides nephelus "HoxD4b. [Source:Uniprot/SPTREMBL;Acc:Q6W987]"Homolog of Sphoeroides nephelus "HoxD4b. [Source:Uniprot/SPTREMBL;Acc:Q6W987]" BY ORTHOLOGY TO:SINFRUT00000181962
18.2642 -22 7.28307e-06 500 4 3 4 [+] picture button
BPGM ENSGACT00000005572 Bisphosphoglycerate mutase (EC 5.4.2.4) (2,3-bisphosphoglycerate mutase, erythrocyte) (2,3-bisphosphoglycerate synthase) (BPGM) (EC 5.4.2.1) (EC 3.1.3.13) (BPG-dependent PGAM). [Source:Uniprot/SWISSPROT;Acc:P07738]
16.4954 -20.49 7.32399e-06 535 10 3 20 [+] picture button
CNOT8 ENSGACT00000027583 CCR4-NOT transcription complex subunit 8 (CCR4-associated factor 8) (CAF1-like protein) (CALIFp) (CAF2). [Source:Uniprot/SWISSPROT;Acc:Q9UFF9]
15.1632 -13.45 8.76194e-06 457 2 2 2 [+] picture button
OTOF (1 of 2) ENSGACT00000011873 Otoferlin (Fer-1-like protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9HC10]
15.0117 -20.72 8.88047e-06 500 4 1 5 [+] picture button
VPS37B ENSGACT00000006892 vacuolar protein sorting 37B [Source:RefSeq_peptide;Acc:NP_078943]
15.6196 -19.08 9.43272e-06 500 5 1 9 [+] picture button
PRIM2A ENSGACT00000008137 DNA primase large subunit (EC 2.7.7.-) (DNA primase 58 kDa subunit) (p58). [Source:Uniprot/SWISSPROT;Acc:P49643]
15.0674 -20.6 1.35861e-05 406 7 2 13 [+] picture button
SUPT16H ENSGACT00000025035 FACT complex subunit SPT16 (Facilitates chromatin transcription complex subunit SPT16) (hSPT16) (FACT 140 kDa subunit) (FACTp140) (Chromatin-specific transcription elongation factor 140 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:Q9Y5B9]
15.0836 -23.15 1.44184e-05 578 6 3 8 [+] picture button
KBTBD7 ENSGACT00000002259 Kelch repeat and BTB domain-containing protein 7. [Source:Uniprot/SWISSPROT;Acc:Q8WVZ9]
17.3849 -22.32 1.74685e-05 500 5 4 4 [+] picture button
IARS2 ENSGACT00000017626 Isoleucyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.5) (Isoleucine--tRNA ligase) (IleRS). [Source:Uniprot/SWISSPROT;Acc:Q9NSE4]
15.6904 -15.07 1.99631e-05 295 6 2 5 [+] picture button
TBP ENSGACT00000021345 TATA-box-binding protein (TATA-box factor) (TATA-binding factor) (TATA sequence-binding protein) (Transcription initiation factor TFIID TBP subunit). [Source:Uniprot/SWISSPROT;Acc:P20226]
15.3935 -16.26 2.02655e-05 500 7 2 9 [+] picture button
MYOCD ENSGACT00000002995 Myocardin. [Source:Uniprot/SWISSPROT;Acc:Q8IZQ8]
16.1404 -15.34 2.098e-05 500 4 1 2 [+] picture button
HTATIP ENSGACT00000027028 Histone acetyltransferase HTATIP (EC 2.3.1.48) (EC 2.3.1.-) (60 kDa Tat interactive protein) (Tip60) (HIV-1 Tat interactive protein) (cPLA(2)-interacting protein). [Source:Uniprot/SWISSPROT;Acc:Q92993]
15.3656 -20.1 2.48236e-05 500 5 2 6 [+] picture button
ICA1L ENSGACT00000018272 Islet cell autoantigen 1-like protein (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 15 protein). [Source:Uniprot/SWISSPROT;Acc:Q8NDH6]
15.594 -10.23 3.09942e-05 500 5 3 9 [+] picture button
RHOV (1 of 2) ENSGACT00000017191 ras homolog gene family, member V [Source:RefSeq_peptide;Acc:NP_598378]
15.2975 -19.25 3.48078e-05 500 8 4 9 [+] picture button
EIF3S9 ENSGACT00000022154 Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p116) (eIF3 p110) (eIF3b) (Prt1 homolog) (hPrt1). [Source:Uniprot/SWISSPROT;Acc:P55884]
15.4226 -22.16 3.58507e-05 494 4 3 9 [+] picture button
NP_620419.2 ENSGACT00000019503 epidermal retinal dehydrogenase 2 [Source:RefSeq_peptide;Acc:NP_620419]
15.1588 -13.24 3.95392e-05 500 7 1 8 [+] picture button
TELO2 ENSGACT00000011202 TEL2, telomere maintenance 2, homolog [Source:RefSeq_peptide;Acc:NP_057195]
15.2521 -23.05 4.42899e-05 442 9 2 9 [+] picture button
CENPA ENSGACT00000013300 Uncharacterized protein C2orf18 precursor. [Source:Uniprot/SWISSPROT;Acc:Q8N357]
16.0871 -14.47 4.76478e-05 500 7 4 9 [+] picture button
PRUNE ENSGACT00000004230 prune homolog [Source:RefSeq_peptide;Acc:NP_067045]
15.6904 -16.76 4.77869e-05 500 8 1 7 [+] picture button
TUBB1 ENSGACT00000008391 Tubulin beta-1 chain. [Source:Uniprot/SWISSPROT;Acc:Q9H4B7]
15.661 -13.4 4.84228e-05 500 10 2 10 [+] picture button
UBXD8 ENSGACT00000024391 UBX domain-containing protein 8 (Protein ETEA). [Source:Uniprot/SWISSPROT;Acc:Q96CS3]
17.2706 -24.34 5.41182e-05 500 4 3 6 [+] picture button
PGAM5 ENSGACT00000017141 Bcl-XL-binding protein v68 [Source:RefSeq_peptide;Acc:NP_612642]
17.3197 -20.13 5.46013e-05 500 7 2 10 [+] picture button
WDR54 ENSGACT00000013619 WD repeat protein 54. [Source:Uniprot/SWISSPROT;Acc:Q9H977]
15.13 -12.49 6.29496e-05 192 3 2 4 [+] picture button
Q8N950_HUMAN ENSGACT00000006556 CDNA FLJ38364 fis, clone FEBRA2000909. [Source:Uniprot/SPTREMBL;Acc:Q8N950]
16.459 -24.65 6.35273e-05 500 3 3 3 [+] picture button
C19orf29 ENSGACT00000020250 Uncharacterized protein C19orf29 (Renal carcinoma antigen NY-REN-24). [Source:Uniprot/SWISSPROT;Acc:Q8WUQ7]
16.2508 -21.94 6.86755e-05 176 6 1 9 [+] picture button
UBE2I ENSGACT00000011801 SUMO-conjugating enzyme UBC9 (EC 6.3.2.-) (SUMO-protein ligase) (Ubiquitin-conjugating enzyme E2 I) (Ubiquitin-protein ligase I) (Ubiquitin carrier protein I) (Ubiquitin carrier protein 9) (p18). [Source:Uniprot/SWISSPROT;Acc:P63279]
17.1931 -18.7 6.92998e-05 714 8 6 11 [+] picture button
MANBA ENSGACT00000006666 Beta-mannosidase precursor (EC 3.2.1.25) (Lysosomal beta A mannosidase) (Mannanase) (Mannase). [Source:Uniprot/SWISSPROT;Acc:O00462]
15.2728 -21.5 7.04009e-05 481 6 2 7 [+] picture button
ICMT ENSGACT00000017632 Protein-S-isoprenylcysteine O-methyltransferase (EC 2.1.1.100) (Isoprenylcysteine carboxylmethyltransferase) (Prenylcysteine carboxyl methyltransferase) (pcCMT) (Prenylated protein carboxyl methyltransferase) (PPMT). [Source:Uniprot/SWISSPROT;Acc:O60725]
16.0068 -20.34 7.06976e-05 500 6 2 6 [+] picture button
LOC390616 ENSGACT00000014393 Homolog of Homo sapiens "Ankyrin repeat domain 34 [Source:UniGene;Acc:Hs.331667]"Homolog of Homo sapiens "Ankyrin repeat domain 34 [Source:UniGene;Acc:Hs.331667]" BY ORTHOLOGY TO:SINFRUT00000183444
15.8219 -15.64 7.0823e-05 500 8 4 10 [+] picture button
DMXL1 ENSGACT00000008264 Protein DmX-like 1 (X-like 1 protein). [Source:Uniprot/SWISSPROT;Acc:Q9Y485]
16.3705 -24.55 7.3308e-05 500 6 1 6 [+] picture button
HIATL1 (1 of 2) ENSGACT00000024208 Hippocampus abundant transcript-like protein 1. [Source:Uniprot/SWISSPROT;Acc:Q5SR56]
16.2188 -24.82 7.34164e-05 500 8 1 8 [+] picture button
ENSGACT00000017450 insulin-like growth factor 1a receptor [Source:RefSeq_peptide;Acc:NP_694500]insulin-like growth factor 1a receptor [Source:RefSeq_peptide;Acc:NP_694500] BY ORTHOLOGY TO:ENSDART00000010189
15.5828 -15.55 7.53419e-05 500 2 3 6 [+] picture button
PGAP1_HUMAN ENSGACT00000002182 GPI inositol-deacylase (EC 3.1.-.-) (hPGAP1). [Source:Uniprot/SWISSPROT;Acc:Q75T13]
16.9609 -19.39 7.60375e-05 500 5 4 7 [+] picture button
TSPAN31 ENSGACT00000015569 Tetraspanin-31 (Tspan-31) (Sarcoma amplified sequence). [Source:Uniprot/SWISSPROT;Acc:Q12999]
14.9059 -13.85 8.13736e-05 131 3 2 7 [+] picture button
NP_001035251.1 (1 of 2) ENSGACT00000025474 MGC13114 protein. [Source:Uniprot/SPTREMBL;Acc:Q96IW1] [from human gene ENSG00000130731]MGC13114 protein. [Source:Uniprot/SPTREMBL;Acc:Q96IW1] [from human gene ENSG00000130731] BY ORTHOLOGY TO:ENSXETT00000043698
15.793 -19.81 8.31615e-05 441 6 3 8 [+] picture button
TWF2 ENSGACT00000002178 Twinfilin-2 (Twinfilin-1-like protein) (A6-related protein) (hA6RP) (Protein tyrosine kinase 9-like). [Source:Uniprot/SWISSPROT;Acc:Q6IBS0]
18.3041 -31.96 8.41555e-05 500 2 1 3 [+] picture button
ENSGACT00000013623 Homolog of Homo sapiens "Lipid phosphate phosphohydrolase 3 [Source:IPI;Acc:IPI00021453]"Homolog of Homo sapiens "Lipid phosphate phosphohydrolase 3 [Source:IPI;Acc:IPI00021453]" BY ORTHOLOGY TO:SINFRUT00000180693
15.2213 -20.39 8.52065e-05 500 6 2 10 [+] picture button
SLC25A30 ENSGACT00000017126 solute carrier family 25, member 30 [Source:RefSeq_peptide;Acc:NP_001010875]
16.4308 -21.07 8.59214e-05 500 8 2 9 [+] picture button
FAM118B ENSGACT00000008672 family with sequence similarity 118, member B (FAM118B), mRNA [Source:RefSeq_dna;Acc:NM_024556]
18.0714 -21.34 8.68357e-05 500 3 1 3 [+] picture button

Page 1 of 20
1 2 3 4 5 6 7 8 9 10 11 .. 20 next >>

Download table: GFF TXT
spacer
spacer