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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-10b

913 hits found.


Page 1 of 19
1 2 3 4 5 6 7 8 9 10 11 .. 19 next >>

Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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HOXA3 ENSGACT00000009419 Homeobox protein Hox-A3 (Hox-1E). [Source:Uniprot/SWISSPROT;Acc:O43365]
15.6076 -15.98 0.00000000909035 500 6 9 12 [+] picture button
POP4 ENSGACT00000019189 Ribonuclease P protein subunit p29 (EC 3.1.26.5) (hPOP4). [Source:Uniprot/SWISSPROT;Acc:O95707]
15.4191 -18.37 0.0000000546346 563 5 1 6 [+] picture button
WNT9A ENSGACT00000023074 Protein Wnt-9a precursor (Wnt-14). [Source:Uniprot/SWISSPROT;Acc:O14904]
15.6508 -18.12 0.000000445552 500 5 5 10 [+] picture button
HOXD10 ENSGACT00000006039 Homeobox protein Hox-D10 (Hox-4D) (Hox-4E). [Source:Uniprot/SWISSPROT;Acc:P28358]
15.7218 -14.55 0.00000072834 500 6 8 7 [+] picture button
DVL2 ENSGACT00000025606 Segment polarity protein dishevelled homolog DVL-2 (Dishevelled-2) (DSH homolog 2). [Source:Uniprot/SWISSPROT;Acc:O14641]
18.2695 -26.77 0.00000230842 500 3 5 4 [+] picture button
SLC35C1 ENSGACT00000022654 GDP-fucose transporter 1 (Solute carrier family 35 member C1). [Source:Uniprot/SWISSPROT;Acc:Q96A29]
15.08 -15.01 0.00000249521 500 5 1 5 [+] picture button
TRAIP ENSGACT00000015985 TRAF-interacting protein (RING finger protein 206). [Source:Uniprot/SWISSPROT;Acc:Q9BWF2]
16.2167 -18.4 0.00000305883 500 5 1 6 [+] picture button
RBM12 ENSGACT00000005545 Copine-1 (Copine I). [Source:Uniprot/SWISSPROT;Acc:Q99829]
14.9731 -12.5 0.0000037879 500 7 6 8 [+] picture button
PC ENSGACT00000026135 Pyruvate carboxylase, mitochondrial precursor (EC 6.4.1.1) (Pyruvic carboxylase) (PCB). [Source:Uniprot/SWISSPROT;Acc:P11498]
15.5079 -14.49 0.0000056613 500 3 2 3 [+] picture button
GRIN2B (2 of 2) ENSGACT00000021128 Glutamate [NMDA] receptor subunit epsilon-2 precursor (N-methyl D- aspartate receptor subtype 2B) (NR2B) (NMDAR2B) (N-methyl-D-aspartate receptor subunit 3) (NR3) (hNR3). [Source:Uniprot/SWISSPROT;Acc:Q13224]
15.9241 -17.61 0.00000636988 500 3 5 6 [+] picture button
MARK2 ENSGACT00000026267 Serine/threonine-protein kinase MARK2 (EC 2.7.11.1) (MAP/microtubule affinity-regulating kinase 2) (ELKL motif kinase) (EMK1) (PAR1 homolog). [Source:Uniprot/SWISSPROT;Acc:Q7KZI7]
15.7306 -13.71 0.00000669419 500 5 4 8 [+] picture button
ENSGACT00000015778 Homolog of Sphoeroides nephelus "HoxD4b. [Source:Uniprot/SPTREMBL;Acc:Q6W987]"Homolog of Sphoeroides nephelus "HoxD4b. [Source:Uniprot/SPTREMBL;Acc:Q6W987]" BY ORTHOLOGY TO:SINFRUT00000181962
18.3202 -21.1 0.00000728307 500 4 3 4 [+] picture button
BPGM ENSGACT00000005572 Bisphosphoglycerate mutase (EC 5.4.2.4) (2,3-bisphosphoglycerate mutase, erythrocyte) (2,3-bisphosphoglycerate synthase) (BPGM) (EC 5.4.2.1) (EC 3.1.3.13) (BPG-dependent PGAM). [Source:Uniprot/SWISSPROT;Acc:P07738]
16.1087 -17.14 0.00000732399 535 10 3 20 [+] picture button
CNOT8 ENSGACT00000027583 CCR4-NOT transcription complex subunit 8 (CCR4-associated factor 8) (CAF1-like protein) (CALIFp) (CAF2). [Source:Uniprot/SWISSPROT;Acc:Q9UFF9]
16.1685 -13.48 0.00000876194 457 2 2 2 [+] picture button
KBTBD7 ENSGACT00000002259 Kelch repeat and BTB domain-containing protein 7. [Source:Uniprot/SWISSPROT;Acc:Q8WVZ9]
16.6843 -17.95 0.0000174685 500 5 4 4 [+] picture button
IARS2 ENSGACT00000017626 Isoleucyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.5) (Isoleucine--tRNA ligase) (IleRS). [Source:Uniprot/SWISSPROT;Acc:Q9NSE4]
16.2909 -14.25 0.0000199631 295 6 2 5 [+] picture button
TBP ENSGACT00000021345 TATA-box-binding protein (TATA-box factor) (TATA-binding factor) (TATA sequence-binding protein) (Transcription initiation factor TFIID TBP subunit). [Source:Uniprot/SWISSPROT;Acc:P20226]
16.4019 -18.25 0.0000202655 500 7 2 9 [+] picture button
MYOCD ENSGACT00000002995 Myocardin. [Source:Uniprot/SWISSPROT;Acc:Q8IZQ8]
15.7489 -16.8 0.00002098 500 4 1 2 [+] picture button
ICA1L ENSGACT00000018272 Islet cell autoantigen 1-like protein (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 15 protein). [Source:Uniprot/SWISSPROT;Acc:Q8NDH6]
15.181 -9.23 0.0000309942 500 5 3 9 [+] picture button
EIF3S9 ENSGACT00000022154 Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p116) (eIF3 p110) (eIF3b) (Prt1 homolog) (hPrt1). [Source:Uniprot/SWISSPROT;Acc:P55884]
16.1019 -21.34 0.0000358507 494 4 3 9 [+] picture button
CENPA ENSGACT00000013300 Uncharacterized protein C2orf18 precursor. [Source:Uniprot/SWISSPROT;Acc:Q8N357]
15.5864 -12.69 0.0000476478 500 7 4 9 [+] picture button
TUBB1 ENSGACT00000008391 Tubulin beta-1 chain. [Source:Uniprot/SWISSPROT;Acc:Q9H4B7]
15.2639 -12.92 0.0000484228 500 10 2 10 [+] picture button
UBXD8 ENSGACT00000024391 UBX domain-containing protein 8 (Protein ETEA). [Source:Uniprot/SWISSPROT;Acc:Q96CS3]
16.6726 -20.45 0.0000541182 500 4 3 6 [+] picture button
PGAM5 ENSGACT00000017141 Bcl-XL-binding protein v68 [Source:RefSeq_peptide;Acc:NP_612642]
15.5448 -19.9 0.0000546013 500 7 2 10 [+] picture button
Q8N950_HUMAN ENSGACT00000006556 CDNA FLJ38364 fis, clone FEBRA2000909. [Source:Uniprot/SPTREMBL;Acc:Q8N950]
16.3917 -20.42 0.0000635273 500 3 3 3 [+] picture button
FBXL15 ENSGACT00000003181 F-box only protein 37 (F-box/LRR-repeat protein 15). [Source:Uniprot/SWISSPROT;Acc:Q9H469]
15.0657 -21.74 0.00006851 362 4 2 8 [+] picture button
C19orf29 ENSGACT00000020250 Uncharacterized protein C19orf29 (Renal carcinoma antigen NY-REN-24). [Source:Uniprot/SWISSPROT;Acc:Q8WUQ7]
16.4041 -21.93 0.0000686755 176 6 1 9 [+] picture button
UBE2I ENSGACT00000011801 SUMO-conjugating enzyme UBC9 (EC 6.3.2.-) (SUMO-protein ligase) (Ubiquitin-conjugating enzyme E2 I) (Ubiquitin-protein ligase I) (Ubiquitin carrier protein I) (Ubiquitin carrier protein 9) (p18). [Source:Uniprot/SWISSPROT;Acc:P63279]
16.8249 -16.22 0.0000692998 714 8 6 11 [+] picture button
MANBA ENSGACT00000006666 Beta-mannosidase precursor (EC 3.2.1.25) (Lysosomal beta A mannosidase) (Mannanase) (Mannase). [Source:Uniprot/SWISSPROT;Acc:O00462]
15.3023 -20.52 0.0000704009 481 6 2 7 [+] picture button
ICMT ENSGACT00000017632 Protein-S-isoprenylcysteine O-methyltransferase (EC 2.1.1.100) (Isoprenylcysteine carboxylmethyltransferase) (Prenylcysteine carboxyl methyltransferase) (pcCMT) (Prenylated protein carboxyl methyltransferase) (PPMT). [Source:Uniprot/SWISSPROT;Acc:O60725]
15.6148 -14.36 0.0000706976 500 6 2 6 [+] picture button
LOC390616 ENSGACT00000014393 Homolog of Homo sapiens "Ankyrin repeat domain 34 [Source:UniGene;Acc:Hs.331667]"Homolog of Homo sapiens "Ankyrin repeat domain 34 [Source:UniGene;Acc:Hs.331667]" BY ORTHOLOGY TO:SINFRUT00000183444
15.1061 -15.05 0.000070823 500 8 4 10 [+] picture button
KLHL14 ENSGACT00000023703 Kelch-like protein 14. [Source:Uniprot/SWISSPROT;Acc:Q9P2G3]
15.3818 -15.1 0.0000721081 500 4 5 6 [+] picture button
DMXL1 ENSGACT00000008264 Protein DmX-like 1 (X-like 1 protein). [Source:Uniprot/SWISSPROT;Acc:Q9Y485]
17.0532 -25.31 0.000073308 500 6 1 6 [+] picture button
HIATL1 (1 of 2) ENSGACT00000024208 Hippocampus abundant transcript-like protein 1. [Source:Uniprot/SWISSPROT;Acc:Q5SR56]
15.294 -21.46 0.0000734164 500 8 1 8 [+] picture button
ENSGACT00000017450 insulin-like growth factor 1a receptor [Source:RefSeq_peptide;Acc:NP_694500]insulin-like growth factor 1a receptor [Source:RefSeq_peptide;Acc:NP_694500] BY ORTHOLOGY TO:ENSDART00000010189
15.5079 -14.42 0.0000753419 500 2 3 6 [+] picture button
PGAP1_HUMAN ENSGACT00000002182 GPI inositol-deacylase (EC 3.1.-.-) (hPGAP1). [Source:Uniprot/SWISSPROT;Acc:Q75T13]
17.1121 -19.34 0.0000760375 500 5 4 7 [+] picture button
NP_001035251.1 (1 of 2) ENSGACT00000025474 MGC13114 protein. [Source:Uniprot/SPTREMBL;Acc:Q96IW1] [from human gene ENSG00000130731]MGC13114 protein. [Source:Uniprot/SPTREMBL;Acc:Q96IW1] [from human gene ENSG00000130731] BY ORTHOLOGY TO:ENSXETT00000043698
15.3937 -15.66 0.0000831615 441 6 3 8 [+] picture button
TWF2 ENSGACT00000002178 Twinfilin-2 (Twinfilin-1-like protein) (A6-related protein) (hA6RP) (Protein tyrosine kinase 9-like). [Source:Uniprot/SWISSPROT;Acc:Q6IBS0]
17.609 -26.09 0.0000841555 500 2 1 3 [+] picture button
ZNF526 ENSGACT00000012482 zinc finger protein 526 [Source:RefSeq_peptide;Acc:NP_597701]
15.4009 -15.72 0.000085018 500 6 1 7 [+] picture button
SLC25A30 ENSGACT00000017126 solute carrier family 25, member 30 [Source:RefSeq_peptide;Acc:NP_001010875]
15.6148 -17.34 0.0000859214 500 8 2 9 [+] picture button
FAM118B ENSGACT00000008672 family with sequence similarity 118, member B (FAM118B), mRNA [Source:RefSeq_dna;Acc:NM_024556]
17.804 -19.73 0.0000868357 500 3 1 3 [+] picture button
WNT1 ENSGACT00000012049 Proto-oncogene protein Wnt-1 precursor. [Source:Uniprot/SWISSPROT;Acc:P04628]
17.8739 -19.05 0.0000918746 500 5 2 8 [+] picture button
ENSGACT00000000827 Homolog of Homo sapiens "sorting nexin 6 isoform b [Source:RefSeq_peptide;Acc:NP_689419]"Homolog of Homo sapiens "sorting nexin 6 isoform b [Source:RefSeq_peptide;Acc:NP_689419]" BY ORTHOLOGY TO:SINFRUT00000181319
15.3859 -18.31 0.000093738 297 6 2 9 [+] picture button
C15orf41 ENSGACT00000013937 Uncharacterized protein C15orf41 (Protein HH114). [Source:Uniprot/SWISSPROT;Acc:Q9Y2V0]
15.4894 -15.33 0.0000953054 500 5 3 7 [+] picture button
BDNF ENSGACT00000020491 Brain-derived neurotrophic factor precursor (BDNF) (Abrineurin). [Source:Uniprot/SWISSPROT;Acc:P23560]
15.562 -14.58 0.0000982553 500 6 9 12 [+] picture button
UBTD2 ENSGACT00000027099 Ubiquitin domain-containing protein 2 (Dendritic cell-derived ubiquitin-like protein) (DC-UbP) (Ubiquitin-like protein SB72). [Source:Uniprot/SWISSPROT;Acc:Q8WUN7]
15.187 -14.2 0.000100746 500 7 3 6 [+] picture button
PLXNA3 ENSGACT00000000352 Plexin-A3 precursor (Plexin-4) (Semaphorin receptor SEX). [Source:Uniprot/SWISSPROT;Acc:P51805]
15.2882 -15.74 0.000101257 500 5 2 8 [+] picture button
ADD1 ENSGACT00000021867 adducin 1 (alpha) isoform b [Source:RefSeq_peptide;Acc:NP_054908]
14.8781 -12.35 0.000108075 500 5 2 4 [+] picture button
STC2 ENSGACT00000024416 Stanniocalcin-2 precursor (STC-2) (Stanniocalcin-related protein) (STCRP) (STC-related protein). [Source:Uniprot/SWISSPROT;Acc:O76061]
15.4983 -19.2 0.000112254 500 4 4 6 [+] picture button
FOXP4 ENSGACT00000000471 Forkhead box protein P4 (Fork head-related protein-like A). [Source:Uniprot/SWISSPROT;Acc:Q8IVH2]
15.1881 -12.4 0.000118978 500 6 3 6 [+] picture button

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Download table: GFF TXT
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