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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-let-7j

894 hits found.


Page 1 of 18
1 2 3 4 5 6 7 8 9 10 11 .. 18 next >>

Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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YOD1 ENSGACT00000006146 Ubiquitin thioesterase OTU1 (EC 3.1.2.-) (OTU domain-containing protein 2) (HIV-1-induced protease 7) (HIN-7) (HsHIN7). [Source:Uniprot/SWISSPROT;Acc:Q5VVQ6]
16.5778 -19.07 9.20453e-14 500 4 3 9 [+] picture button
LIN28B ENSGACT00000012454 Lin-28 homolog B. [Source:Uniprot/SWISSPROT;Acc:Q6ZN17]
15.9778 -14.3 1.67919e-13 500 4 4 6 [+] picture button
TRIM71 ENSGACT00000011014 Tripartite motif-containing protein 71 (Lin-41 homolog). [Source:Uniprot/SWISSPROT;Acc:Q2Q1W2]
16.1951 -14.87 1.11674e-10 500 8 4 7 [+] picture button
SEMA4C ENSGACT00000017316 Semaphorin-4C precursor. [Source:Uniprot/SWISSPROT;Acc:Q9C0C4]
16.7144 -10.31 2.94605e-08 500 3 4 4 [+] picture button
MYC ENSGACT00000005889 Myc proto-oncogene protein (c-Myc) (Transcription factor p64). [Source:Uniprot/SWISSPROT;Acc:P01106]
16.5441 -19.29 7.34567e-08 500 9 13 15 [+] picture button
ACSS2 ENSGACT00000013559 Acetyl-coenzyme A synthetase, cytoplasmic (EC 6.2.1.1) (Acetate--CoA ligase) (Acyl-activating enzyme) (Acetyl-CoA synthetase) (ACS) (AceCS) (Acyl-CoA synthetase short-chain family member 2). [Source:Uniprot/SWISSPROT;Acc:Q9NR19]
16.0118 -17.68 9.28216e-08 500 4 1 6 [+] picture button
NPEPL1 ENSGACT00000000634 Syntaxin-16 (Syn16). [Source:Uniprot/SWISSPROT;Acc:O14662]
16.6007 -18.34 9.91459e-08 107 2 3 3 [+] picture button
TARBP2 ENSGACT00000008823 TAR RNA-binding protein 2 (Trans-activation-responsive RNA-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q15633]
15.9637 -18.52 9.98851e-08 500 3 7 6 [+] picture button
E2F5 ENSGACT00000022514 Transcription factor E2F5 (E2F-5). [Source:Uniprot/SWISSPROT;Acc:Q15329]
16.0118 -16.7 1.6415e-07 500 9 4 13 [+] picture button
RDX ENSGACT00000019699 Radixin. [Source:Uniprot/SWISSPROT;Acc:P35241]
16.6408 -16.51 1.88192e-07 500 8 2 9 [+] picture button
KIAA0241 ENSGACT00000007357 KIAA0241 (KIAA0241), mRNA [Source:RefSeq_dna;Acc:NM_015060]
16.6071 -19.32 2.99013e-07 500 7 1 8 [+] picture button
GATM ENSGACT00000019873 Glycine amidinotransferase, mitochondrial precursor (EC 2.1.4.1) (L- arginine:glycine amidinotransferase) (Transamidinase) (AT). [Source:Uniprot/SWISSPROT;Acc:P50440]
16.0118 -13.98 3.33573e-07 500 8 7 9 [+] picture button
ENSGACT00000020304 Homolog of Homo sapiens "Splice Isoform PTPS-MEB of Receptor-type tyrosine-protein phosphatase S precursor [Source:IPI;Acc:IPI00332272]"Homolog of Homo sapiens "Splice Isoform PTPS-MEB of Receptor-type tyrosine-protein phosphatase S precursor [Source:IPI;Acc:IPI00332272]" BY ORTHOLOGY TO:SINFRUT00000180296
16.6007 -13.31 4.19296e-07 320 3 4 6 [+] picture button
ATP2A2 (2 of 2) ENSGACT00000017795 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (EC 3.6.3.8) (Calcium pump 2) (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase). [Source:Uniprot/SWISSPROT;Acc:P16615]
16.9496 -20.43 7.01176e-07 500 2 9 4 [+] picture button
ACVR1B (1 of 2) ENSGACT00000011949 Activin receptor type 1B precursor (EC 2.7.11.30) (ACTR-IB) (Serine/threonine-protein kinase receptor R2) (SKR2) (Activin receptor-like kinase 4) (ALK-4). [Source:Uniprot/SWISSPROT;Acc:P36896]
17.9737 -19.08 8.22493e-07 500 7 7 9 [+] picture button
SRA1 ENSGACT00000027692 Steroid receptor RNA activator 1 (Steroid receptor RNA activator protein) (SRAP). [Source:Uniprot/SWISSPROT;Acc:Q9HD15]
16.4738 -17.89 9.16424e-07 491 2 1 2 [+] picture button
HBEGF ENSGACT00000024318 Heparin-binding EGF-like growth factor precursor (HB-EGF) (HBEGF) (Diphtheria toxin receptor) (DT-R). [Source:Uniprot/SWISSPROT;Acc:Q99075]
18.1331 -20.16 1e-06 500 5 3 8 [+] picture button
ENSGACT00000013727 NOT ANNOTATED
16.8831 -16.78 1e-06 500 11 1 3 [+] picture button
NEU3 ENSGACT00000027421 Sialidase-3 (EC 3.2.1.18) (Membrane sialidase) (Ganglioside sialidase) (N-acetyl-alpha-neuraminidase 3). [Source:Uniprot/SWISSPROT;Acc:Q9UQ49]
16.5491 -13.88 1.48093e-06 500 6 1 10 [+] picture button
SMOX ENSGACT00000023329 Spermine oxidase (EC 1.5.3.-) (Polyamine oxidase 1) (PAO-1) (PAOh1). [Source:Uniprot/SWISSPROT;Acc:Q9NWM0]
16.524 -19.02 1.88441e-06 340 8 5 18 [+] picture button
C15orf29 ENSGACT00000010497 Uncharacterized protein C15orf29. [Source:Uniprot/SWISSPROT;Acc:Q9H079]
16.2687 -19.31 2.23891e-06 552 8 5 10 [+] picture button
C4orf8 ENSGACT00000022274 Uncharacterized protein C4orf8 (Protein IT14). [Source:Uniprot/SWISSPROT;Acc:P78312]
16.6151 -18.85 2.34134e-06 688 5 4 5 [+] picture button
SAMD5 ENSGACT00000015395 sterile alpha motif domain containing 5 [Source:RefSeq_peptide;Acc:NP_001025231]
16.2267 -14.36 2.61555e-06 500 6 2 8 [+] picture button
KIAA0274 ENSGACT00000015251 SAC domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q92562]
17.5585 -18.67 3.74323e-06 310 6 1 13 [+] picture button
MARS2 ENSGACT00000023152 Methionyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.10) (Methionine--tRNA ligase 2) (Mitochondrial methionine--tRNA ligase) (MtMetRS). [Source:Uniprot/SWISSPROT;Acc:Q96GW9]
16.4416 -15.07 3.97864e-06 500 2 1 3 [+] picture button
LRRC29 ENSGACT00000018323 Leucine-rich repeat-containing protein 29 (F-box/LRR-repeat protein 9) (F-box and leucine-rich repeat protein 9) (F-box protein FBL9). [Source:Uniprot/SWISSPROT;Acc:Q8WV35]
16.1192 -15.49 4.22148e-06 500 3 2 3 [+] picture button
ALG8 ENSGACT00000027686 Probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3- glucosyltransferase (EC 2.4.1.-) (Dolichyl-P-Glc:Glc1Man9GlcNAc2-PP- dolichyl glucosyltransferase) (Asparagine-linked glycosylation protein 8 homolog). [Source:Uniprot/SWISSPROT;Acc:Q9BVK2]
17.3013 -15.97 4.56763e-06 500 2 4 2 [+] picture button
MESDC1 ENSGACT00000016487 Mesoderm development candidate 1. [Source:Uniprot/SWISSPROT;Acc:Q9H1K6]
16.3342 -16.3 4.89506e-06 500 8 5 8 [+] picture button
EIF2C1 ENSGACT00000016486 Eukaryotic translation initiation factor 2C 1 (eIF2C 1) (eIF-2C 1) (Argonaute-1) (Putative RNA-binding protein Q99). [Source:Uniprot/SWISSPROT;Acc:Q9UL18]
16.5093 -15.61 5.76524e-06 500 5 2 8 [+] picture button
ANAPC7 ENSGACT00000017805 Anaphase-promoting complex subunit 7 (APC7) (Cyclosome subunit 7). [Source:Uniprot/SWISSPROT;Acc:Q9UJX3]
17.0576 -17.58 5.82905e-06 500 6 1 7 [+] picture button
GRTP1 (2 of 2) ENSGACT00000004128 growth hormone regulated TBC protein 1 [Source:RefSeq_peptide;Acc:NP_078995]
17.597 -18.59 6.00022e-06 404 7 3 8 [+] picture button
TMEM41A (2 of 2) ENSGACT00000008026 Transmembrane protein 41A precursor. [Source:Uniprot/SWISSPROT;Acc:Q96HV5]
16.0118 -13.9 6.65877e-06 500 11 1 14 [+] picture button
MARCH6 (2 of 2) ENSGACT00000019206 E3 ubiquitin-protein ligase MARCH6 (EC 6.3.2.-) (Membrane-associated RING finger protein 6) (Membrane-associated RING-CH protein VI) (MARCH-VI) (RING finger protein 176) (Protein TEB-4) (Doa10 homolog). [Source:Uniprot/SWISSPROT;Acc:O60337]
16.6956 -17.69 7.94195e-06 500 4 1 7 [+] picture button
RBM35B ENSGACT00000021637 RNA-binding protein 35B (RNA-binding motif protein 35B). [Source:Uniprot/SWISSPROT;Acc:Q9H6T0]
16.8032 -21.51 8.39126e-06 500 5 2 7 [+] picture button
ALPL ENSGACT00000006060 Alkaline phosphatase, tissue-nonspecific isozyme precursor (EC 3.1.3.1) (AP-TNAP) (TNSALP) (Alkaline phosphatase liver/bone/kidney isozyme). [Source:Uniprot/SWISSPROT;Acc:P05186]
17.716 -20.86 8.58788e-06 504 5 1 6 [+] picture button
SIRT4 ENSGACT00000001948 NAD-dependent deacetylase sirtuin-4 (EC 3.5.1.-) (SIR2-like protein 4). [Source:Uniprot/SWISSPROT;Acc:Q9Y6E7]
17.3314 -16.83 9.0791e-06 500 8 1 10 [+] picture button
PPRC1 ENSGACT00000009710 peroxisome proliferator-activated receptor gamma, coactivator-related 1 [Source:RefSeq_peptide;Acc:NP_055877]
16.2596 -16.44 9.85341e-06 322 4 4 6 [+] picture button
GBA2 ENSGACT00000025304 Non-lysosomal glucosylceramidase (EC 3.2.1.45) (NLGase) (Glucosylceramidase 2) (Beta-glucocerebrosidase 2) (Beta-glucosidase 2). [Source:Uniprot/SWISSPROT;Acc:Q9HCG7]
17.086 -14.99 1.02772e-05 332 7 3 8 [+] picture button
WDR60 ENSGACT00000005244 WD repeat protein 60. [Source:Uniprot/SWISSPROT;Acc:Q8WVS4]
16.0608 -14.2 1.07957e-05 500 7 1 14 [+] picture button
KCNK6 ENSGACT00000016659 Potassium channel subfamily K member 6 (Inward rectifying potassium channel protein TWIK-2) (TWIK-originated similarity sequence). [Source:Uniprot/SWISSPROT;Acc:Q9Y257]
17.7377 -13.45 1.12516e-05 74 2 3 3 [+] picture button
LDLRAD3 ENSGACT00000015066 low density lipoprotein receptor class A domain containing 3 [Source:RefSeq_peptide;Acc:NP_777562]
16.6565 -17.82 1.13254e-05 500 3 1 3 [+] picture button
C2orf40 ENSGACT00000003992 Esophageal cancer related gene 4 protein precursor. [Source:Uniprot/SWISSPROT;Acc:Q9H1Z8]
17.5103 -17.57 1.2184e-05 203 3 1 6 [+] picture button
FRMPD1 ENSGACT00000024503 FERM and PDZ domain containing 1 [Source:RefSeq_peptide;Acc:NP_055722]
17.5037 -20.63 1.25395e-05 500 9 3 11 [+] picture button
VPS29 ENSGACT00000006239 Vacuolar protein sorting-associated protein 29 (Vesicle protein sorting 29) (hVPS29) (PEP11). [Source:Uniprot/SWISSPROT;Acc:Q9UBQ0]
16.885 -18.71 1.34699e-05 350 6 3 10 [+] picture button
NTF3 ENSGACT00000025413 Neurotrophin-3 precursor (NT-3) (Neurotrophic factor) (HDNF) (Nerve growth factor 2) (NGF-2). [Source:Uniprot/SWISSPROT;Acc:P20783]
16.5491 -16.73 1.51346e-05 500 5 8 4 [+] picture button
C14orf115 ENSGACT00000017112 Uncharacterized protein C14orf115. [Source:Uniprot/SWISSPROT;Acc:Q9H8Y1]
18.3759 -20.52 1.6302e-05 500 6 2 9 [+] picture button
RSAD1 ENSGACT00000014073 Radical S-adenosyl methionine domain-containing protein 1, mitochondrial precursor (EC 1.3.99.-) (Oxygen-independent coproporphyrinogen III oxidase-like protein RSAD1). [Source:Uniprot/SWISSPROT;Acc:Q9HA92]
17.624 -18.07 1.84239e-05 215 4 1 6 [+] picture button
FBXL14 (1 of 2) ENSGACT00000016054 F-box/LRR-repeat protein 14 (F-box and leucine-rich repeat protein 14). [Source:Uniprot/SWISSPROT;Acc:Q8N1E6]
16.4322 -17.36 2.04223e-05 500 5 4 6 [+] picture button
SOCS3 (2 of 2) ENSGACT00000003905 Suppressor of cytokine signaling 3 (SOCS-3) (Cytokine-inducible SH2 protein 3) (CIS-3) (STAT-induced STAT inhibitor 3) (SSI-3). [Source:Uniprot/SWISSPROT;Acc:O14543]
16.3696 -15.95 2.05119e-05 500 4 3 5 [+] picture button
ADRB2 (1 of 2) ENSGACT00000024447 Beta-2 adrenergic receptor (Beta-2 adrenoceptor) (Beta-2 adrenoreceptor). [Source:Uniprot/SWISSPROT;Acc:P07550]
15.9043 -15.88 2.10979e-05 500 5 2 7 [+] picture button

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Download table: GFF TXT
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