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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-let-7h

860 hits found.


Page 1 of 18
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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YOD1 ENSGACT00000006146 Ubiquitin thioesterase OTU1 (EC 3.1.2.-) (OTU domain-containing protein 2) (HIV-1-induced protease 7) (HIN-7) (HsHIN7). [Source:Uniprot/SWISSPROT;Acc:Q5VVQ6]
16.4702 -14.94 9.20453e-14 500 4 3 9 [+] picture button
LIN28B ENSGACT00000012454 Lin-28 homolog B. [Source:Uniprot/SWISSPROT;Acc:Q6ZN17]
17.2821 -20.41 1.67919e-13 500 4 4 6 [+] picture button
RCN1 ENSGACT00000021191 Reticulocalbin-1 precursor. [Source:Uniprot/SWISSPROT;Acc:Q15293]
16.7225 -23.79 8.91659e-09 500 6 3 9 [+] picture button
UBE2G2 ENSGACT00000000374 Ubiquitin-conjugating enzyme E2 G2 (EC 6.3.2.19) (Ubiquitin-protein ligase G2) (Ubiquitin carrier protein G2). [Source:Uniprot/SWISSPROT;Acc:P60604]
16.3733 -20.53 8.8528e-08 283 6 3 10 [+] picture button
TARBP2 ENSGACT00000008823 TAR RNA-binding protein 2 (Trans-activation-responsive RNA-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q15633]
17.258 -24.22 9.98851e-08 500 3 7 6 [+] picture button
RDX ENSGACT00000019699 Radixin. [Source:Uniprot/SWISSPROT;Acc:P35241]
16.8569 -20.4 1.88192e-07 500 8 2 9 [+] picture button
ZNF644 ENSGACT00000020744 Zinc finger protein 644 (Zinc finger motif enhancer-binding protein 2) (Zep-2). [Source:Uniprot/SWISSPROT;Acc:Q9H582]
17.5467 -21.65 2.7015e-07 500 3 3 5 [+] picture button
GATM ENSGACT00000019873 Glycine amidinotransferase, mitochondrial precursor (EC 2.1.4.1) (L- arginine:glycine amidinotransferase) (Transamidinase) (AT). [Source:Uniprot/SWISSPROT;Acc:P50440]
16.2267 -21.86 3.33573e-07 500 8 7 9 [+] picture button
ENSGACT00000020304 Homolog of Homo sapiens "Splice Isoform PTPS-MEB of Receptor-type tyrosine-protein phosphatase S precursor [Source:IPI;Acc:IPI00332272]"Homolog of Homo sapiens "Splice Isoform PTPS-MEB of Receptor-type tyrosine-protein phosphatase S precursor [Source:IPI;Acc:IPI00332272]" BY ORTHOLOGY TO:SINFRUT00000180296
17.0555 -17.78 4.19296e-07 320 3 4 6 [+] picture button
FGF6 (1 of 2) ENSGACT00000026345 Fibroblast growth factor 6 precursor (FGF-6) (HBGF-6) (HST-2). [Source:Uniprot/SWISSPROT;Acc:P10767]
18.4696 -23.52 5.19952e-07 500 7 4 13 [+] picture button
ATP2A2 (2 of 2) ENSGACT00000017795 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (EC 3.6.3.8) (Calcium pump 2) (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase). [Source:Uniprot/SWISSPROT;Acc:P16615]
16.7337 -20.38 7.01176e-07 500 2 9 4 [+] picture button
PACS1 ENSGACT00000025191 Phosphofurin acidic cluster sorting protein 1 (PACS-1). [Source:Uniprot/SWISSPROT;Acc:Q6VY07]
16.9316 -24.67 7.68528e-07 500 5 4 6 [+] picture button
HBEGF ENSGACT00000024318 Heparin-binding EGF-like growth factor precursor (HB-EGF) (HBEGF) (Diphtheria toxin receptor) (DT-R). [Source:Uniprot/SWISSPROT;Acc:Q99075]
17.1617 -16.44 1e-06 500 5 3 8 [+] picture button
ENSGACT00000013727 NOT ANNOTATED
20.0832 -28.63 1e-06 500 11 1 3 [+] picture button
NEU3 ENSGACT00000027421 Sialidase-3 (EC 3.2.1.18) (Membrane sialidase) (Ganglioside sialidase) (N-acetyl-alpha-neuraminidase 3). [Source:Uniprot/SWISSPROT;Acc:Q9UQ49]
17.0864 -15.76 1.48093e-06 500 6 1 10 [+] picture button
C15orf29 ENSGACT00000010497 Uncharacterized protein C15orf29. [Source:Uniprot/SWISSPROT;Acc:Q9H079]
16.2687 -19.15 2.23891e-06 552 8 5 10 [+] picture button
PDZRN3 ENSGACT00000015596 PDZ domain-containing RING finger protein 3 (Ligand of Numb-protein X 3) (Semaphorin cytoplasmic domain-associated protein 3) (Protein SEMACAP3). [Source:Uniprot/SWISSPROT;Acc:Q9UPQ7]
16.3342 -15.85 2.76799e-06 500 5 4 8 [+] picture button
KIAA0274 ENSGACT00000015251 SAC domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q92562]
16.9921 -17.46 3.74323e-06 310 6 1 13 [+] picture button
LRRC29 ENSGACT00000018323 Leucine-rich repeat-containing protein 29 (F-box/LRR-repeat protein 9) (F-box and leucine-rich repeat protein 9) (F-box protein FBL9). [Source:Uniprot/SWISSPROT;Acc:Q8WV35]
16.6565 -15.32 4.22148e-06 500 3 2 3 [+] picture button
EIF2C1 ENSGACT00000016486 Eukaryotic translation initiation factor 2C 1 (eIF2C 1) (eIF-2C 1) (Argonaute-1) (Putative RNA-binding protein Q99). [Source:Uniprot/SWISSPROT;Acc:Q9UL18]
16.2921 -21.62 5.76524e-06 500 5 2 8 [+] picture button
ANAPC7 ENSGACT00000017805 Anaphase-promoting complex subunit 7 (APC7) (Cyclosome subunit 7). [Source:Uniprot/SWISSPROT;Acc:Q9UJX3]
17.0576 -19.12 5.82905e-06 500 6 1 7 [+] picture button
MAP2K5 ENSGACT00000022350 Dual specificity mitogen-activated protein kinase kinase 5 (EC 2.7.12.2) (MAP kinase kinase 5) (MAPKK 5) (MAPK/ERK kinase 5). [Source:Uniprot/SWISSPROT;Acc:Q13163]
17.6039 -18.1 6.17758e-06 500 5 2 6 [+] picture button
NHLRC2 ENSGACT00000008714 NHL repeat containing 2 [Source:RefSeq_peptide;Acc:NP_940916]
16.3342 -13.8 6.57506e-06 500 5 1 9 [+] picture button
TMEM41A (2 of 2) ENSGACT00000008026 Transmembrane protein 41A precursor. [Source:Uniprot/SWISSPROT;Acc:Q96HV5]
16.764 -13 6.65877e-06 500 11 1 14 [+] picture button
ENSGACT00000023999 CG40050-PA.3 [Source:RefSeq_peptide;Acc:NP_001015377]CG40050-PA.3 [Source:RefSeq_peptide;Acc:NP_001015377] BY ORTHOLOGY TO:CG40050-RA
17.1007 -19.56 6.83096e-06 535 4 2 6 [+] picture button
BRP44L ENSGACT00000021236 Brain protein 44-like protein. [Source:Uniprot/SWISSPROT;Acc:Q9Y5U8]
16.9008 -20.5 7.06812e-06 500 6 2 13 [+] picture button
STX18 ENSGACT00000011020 Syntaxin-18 (Cell growth-inhibiting gene 9 protein). [Source:Uniprot/SWISSPROT;Acc:Q9P2W9]
16.3625 -19.28 7.38765e-06 500 4 3 6 [+] picture button
MARCH6 (2 of 2) ENSGACT00000019206 E3 ubiquitin-protein ligase MARCH6 (EC 6.3.2.-) (Membrane-associated RING finger protein 6) (Membrane-associated RING-CH protein VI) (MARCH-VI) (RING finger protein 176) (Protein TEB-4) (Doa10 homolog). [Source:Uniprot/SWISSPROT;Acc:O60337]
18.0051 -23.68 7.94195e-06 500 4 1 7 [+] picture button
NP_542768.1 (1 of 2) ENSGACT00000013508 CDNA FLJ20703 fis, clone KAIA1965. [Source:Uniprot/SPTREMBL;Acc:Q9NWP4]
16.1192 -15.22 8.13674e-06 500 5 3 7 [+] picture button
ALPL ENSGACT00000006060 Alkaline phosphatase, tissue-nonspecific isozyme precursor (EC 3.1.3.1) (AP-TNAP) (TNSALP) (Alkaline phosphatase liver/bone/kidney isozyme). [Source:Uniprot/SWISSPROT;Acc:P05186]
17.6086 -23.31 8.58788e-06 504 5 1 6 [+] picture button
PPRC1 ENSGACT00000009710 peroxisome proliferator-activated receptor gamma, coactivator-related 1 [Source:RefSeq_peptide;Acc:NP_055877]
16.3733 -18.64 9.85341e-06 322 4 4 6 [+] picture button
ETV2 ENSGACT00000016347 ETS translocation variant 2 (Ets-related protein 71). [Source:Uniprot/SWISSPROT;Acc:O00321]
16.8715 -15.96 9.89128e-06 500 11 1 14 [+] picture button
WDR60 ENSGACT00000005244 WD repeat protein 60. [Source:Uniprot/SWISSPROT;Acc:Q8WVS4]
17.4621 -15.48 1.07957e-05 500 7 1 14 [+] picture button
KCNK6 ENSGACT00000016659 Potassium channel subfamily K member 6 (Inward rectifying potassium channel protein TWIK-2) (TWIK-originated similarity sequence). [Source:Uniprot/SWISSPROT;Acc:Q9Y257]
18.0788 -11.28 1.12516e-05 74 2 3 3 [+] picture button
FGL2 (1 of 2) ENSGACT00000024966 Fibroleukin precursor (Fibrinogen-like protein 2) (pT49). [Source:Uniprot/SWISSPROT;Acc:Q14314]
16.1414 -15.51 1.13587e-05 500 2 4 5 [+] picture button
ESR1 ENSGACT00000011530 Estrogen receptor (ER) (Estradiol receptor) (ER-alpha). [Source:Uniprot/SWISSPROT;Acc:P03372]
16.5778 -14.57 1.20982e-05 500 4 2 5 [+] picture button
C2orf40 ENSGACT00000003992 Esophageal cancer related gene 4 protein precursor. [Source:Uniprot/SWISSPROT;Acc:Q9H1Z8]
17.7377 -20.67 1.2184e-05 203 3 1 6 [+] picture button
PREP ENSGACT00000012436 Prolyl endopeptidase (EC 3.4.21.26) (Post-proline cleaving enzyme) (PE). [Source:Uniprot/SWISSPROT;Acc:P48147]
16.759 -14.44 1.24385e-05 490 5 2 7 [+] picture button
FRMPD1 ENSGACT00000024503 FERM and PDZ domain containing 1 [Source:RefSeq_peptide;Acc:NP_055722]
16.8514 -19.06 1.25395e-05 500 9 3 11 [+] picture button
C14orf115 ENSGACT00000017112 Uncharacterized protein C14orf115. [Source:Uniprot/SWISSPROT;Acc:Q9H8Y1]
18.0535 -19.05 1.6302e-05 500 6 2 9 [+] picture button
APEX2 ENSGACT00000016299 DNA-(apurinic or apyrimidinic site) lyase 2 (EC 4.2.99.18) (Apurinic- apyrimidinic endonuclease 2) (AP endonuclease 2) (APEX nuclease 2) (APEX nuclease-like 2) (AP endonuclease XTH2). [Source:Uniprot/SWISSPROT;Acc:Q9UBZ4]
16.4416 -11.3 1.69524e-05 500 6 2 7 [+] picture button
HOXD3 ENSGACT00000006018 Homeobox protein Hox-D3 (Hox-4A). [Source:Uniprot/SWISSPROT;Acc:P31249]
16.8317 -20.08 1.90709e-05 500 10 4 20 [+] picture button
ENSGACT00000014751 Probable mitochondrial 39S ribosomal protein L23 (L23mt) (MRP-L23). [Source:Uniprot/SWISSPROT;Acc:Q5TUE9]Probable mitochondrial 39S ribosomal protein L23 (L23mt) (MRP-L23). [Source:Uniprot/SWISSPROT;Acc:Q5TUE9] BY ORTHOLOGY TO:AGAP010338-RA
16.2517 -18.48 1.93405e-05 729 3 3 3 [+] picture button
FBXL14 (1 of 2) ENSGACT00000016054 F-box/LRR-repeat protein 14 (F-box and leucine-rich repeat protein 14). [Source:Uniprot/SWISSPROT;Acc:Q8N1E6]
16.216 -15.26 2.04223e-05 500 5 4 6 [+] picture button
SOCS3 (2 of 2) ENSGACT00000003905 Suppressor of cytokine signaling 3 (SOCS-3) (Cytokine-inducible SH2 protein 3) (CIS-3) (STAT-induced STAT inhibitor 3) (SSI-3). [Source:Uniprot/SWISSPROT;Acc:O14543]
16.1527 -19.03 2.05119e-05 500 4 3 5 [+] picture button
COBLL1 ENSGACT00000007246 Cordon-bleu protein-like 1. [Source:Uniprot/SWISSPROT;Acc:Q53SF7]
16.4416 -14.94 2.0593e-05 500 4 1 4 [+] picture button
ADRB2 (1 of 2) ENSGACT00000024447 Beta-2 adrenergic receptor (Beta-2 adrenoceptor) (Beta-2 adrenoreceptor). [Source:Uniprot/SWISSPROT;Acc:P07550]
16.1192 -17.42 2.10979e-05 500 5 2 7 [+] picture button
ACVR2B (1 of 2) ENSGACT00000022089 Activin receptor type-2B precursor (EC 2.7.11.30) (Activin receptor type IIB) (ACTR-IIB). [Source:Uniprot/SWISSPROT;Acc:Q13705]
16.9789 -19.57 2.13481e-05 500 5 4 7 [+] picture button
SRGAP3 (1 of 2) ENSGACT00000001197 SLIT-ROBO Rho GTPase-activating protein 3 (srGAP3) (srGAP2) (WAVE- associated Rac GTPase-activating protein) (WRP) (Mental disorder- associated GAP) (Rho GTPase-activating protein 14). [Source:Uniprot/SWISSPROT;Acc:O43295]
16.3625 -17.67 2.38448e-05 500 5 4 7 [+] picture button
PARK2 ENSGACT00000016398 Parkin (EC 6.3.2.-) (Ubiquitin E3 ligase PRKN) (Parkinson juvenile disease protein 2) (Parkinson disease protein 2). [Source:Uniprot/SWISSPROT;Acc:O60260]
16.7144 -20.55 2.64132e-05 106 2 4 6 [+] picture button

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Download table: GFF TXT
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