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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-let-7g

888 hits found.


Page 1 of 18
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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YOD1 ENSGACT00000006146 Ubiquitin thioesterase OTU1 (EC 3.1.2.-) (OTU domain-containing protein 2) (HIV-1-induced protease 7) (HIN-7) (HsHIN7). [Source:Uniprot/SWISSPROT;Acc:Q5VVQ6]
17.1161 -17.74 9.20453e-14 500 4 3 9 [+] picture button
TRIM71 ENSGACT00000011014 Tripartite motif-containing protein 71 (Lin-41 homolog). [Source:Uniprot/SWISSPROT;Acc:Q2Q1W2]
16.1951 -15 1.11674e-10 500 8 4 7 [+] picture button
NPEPL1 ENSGACT00000000634 Syntaxin-16 (Syn16). [Source:Uniprot/SWISSPROT;Acc:O14662]
16.2596 -15.22 9.91459e-08 107 2 3 3 [+] picture button
E2F5 ENSGACT00000022514 Transcription factor E2F5 (E2F-5). [Source:Uniprot/SWISSPROT;Acc:Q15329]
16.3342 -21.16 1.6415e-07 500 9 4 13 [+] picture button
RDX ENSGACT00000019699 Radixin. [Source:Uniprot/SWISSPROT;Acc:P35241]
16.8569 -17.73 1.88192e-07 500 8 2 9 [+] picture button
ZNF644 ENSGACT00000020744 Zinc finger protein 644 (Zinc finger motif enhancer-binding protein 2) (Zep-2). [Source:Uniprot/SWISSPROT;Acc:Q9H582]
16.9008 -16.99 2.7015e-07 500 3 3 5 [+] picture button
ENSGACT00000020304 Homolog of Homo sapiens "Splice Isoform PTPS-MEB of Receptor-type tyrosine-protein phosphatase S precursor [Source:IPI;Acc:IPI00332272]"Homolog of Homo sapiens "Splice Isoform PTPS-MEB of Receptor-type tyrosine-protein phosphatase S precursor [Source:IPI;Acc:IPI00332272]" BY ORTHOLOGY TO:SINFRUT00000180296
17.0555 -16.99 4.19296e-07 320 3 4 6 [+] picture button
FGF6 (1 of 2) ENSGACT00000026345 Fibroblast growth factor 6 precursor (FGF-6) (HBGF-6) (HST-2). [Source:Uniprot/SWISSPROT;Acc:P10767]
17.0489 -19.64 5.19952e-07 500 7 4 13 [+] picture button
ATP2A2 (2 of 2) ENSGACT00000017795 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (EC 3.6.3.8) (Calcium pump 2) (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase). [Source:Uniprot/SWISSPROT;Acc:P16615]
17.2735 -18.64 7.01176e-07 500 2 9 4 [+] picture button
EIF3S9 ENSGACT00000022154 Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p116) (eIF3 p110) (eIF3b) (Prt1 homolog) (hPrt1). [Source:Uniprot/SWISSPROT;Acc:P55884]
16.1796 -15.79 7.73218e-07 494 4 3 9 [+] picture button
ACVR1B (1 of 2) ENSGACT00000011949 Activin receptor type 1B precursor (EC 2.7.11.30) (ACTR-IB) (Serine/threonine-protein kinase receptor R2) (SKR2) (Activin receptor-like kinase 4) (ALK-4). [Source:Uniprot/SWISSPROT;Acc:P36896]
16.5576 -17.82 8.22493e-07 500 7 7 9 [+] picture button
SNX17 ENSGACT00000014269 Sorting nexin-17. [Source:Uniprot/SWISSPROT;Acc:Q15036]
16.2728 -17.76 8.57802e-07 500 3 4 4 [+] picture button
HBEGF ENSGACT00000024318 Heparin-binding EGF-like growth factor precursor (HB-EGF) (HBEGF) (Diphtheria toxin receptor) (DT-R). [Source:Uniprot/SWISSPROT;Acc:Q99075]
18.6728 -20.75 1e-06 500 5 3 8 [+] picture button
ENSGACT00000013727 NOT ANNOTATED
18.759 -24.59 1e-06 500 11 1 3 [+] picture button
EIF2C4 ENSGACT00000003525 Eukaryotic translation initiation factor 2C 4 (eIF2C 4) (eIF-2C 4) (Argonaute-4). [Source:Uniprot/SWISSPROT;Acc:Q9HCK5]
16.4416 -17.97 1.22838e-06 500 6 3 8 [+] picture button
CKAP5 ENSGACT00000018666 Cytoskeleton-associated protein 5 (Colonic and hepatic tumor over- expressed protein) (Ch-TOG protein). [Source:Uniprot/SWISSPROT;Acc:Q14008]
16.5491 -18.4 1.406e-06 500 4 1 7 [+] picture button
NEU3 ENSGACT00000027421 Sialidase-3 (EC 3.2.1.18) (Membrane sialidase) (Ganglioside sialidase) (N-acetyl-alpha-neuraminidase 3). [Source:Uniprot/SWISSPROT;Acc:Q9UQ49]
17.0864 -17.27 1.48093e-06 500 6 1 10 [+] picture button
SMOX ENSGACT00000023329 Spermine oxidase (EC 1.5.3.-) (Polyamine oxidase 1) (PAO-1) (PAOh1). [Source:Uniprot/SWISSPROT;Acc:Q9NWM0]
16.1867 -19.4 1.88441e-06 340 8 5 18 [+] picture button
C15orf29 ENSGACT00000010497 Uncharacterized protein C15orf29. [Source:Uniprot/SWISSPROT;Acc:Q9H079]
16.2687 -18.45 2.23891e-06 552 8 5 10 [+] picture button
KIAA0274 ENSGACT00000015251 SAC domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q92562]
16.3124 -17.07 3.74323e-06 310 6 1 13 [+] picture button
ANAPC7 ENSGACT00000017805 Anaphase-promoting complex subunit 7 (APC7) (Cyclosome subunit 7). [Source:Uniprot/SWISSPROT;Acc:Q9UJX3]
17.3815 -19.36 5.82905e-06 500 6 1 7 [+] picture button
COPS4 ENSGACT00000020762 COP9 signalosome complex subunit 4 (Signalosome subunit 4) (SGN4) (JAB1-containing signalosome subunit 4). [Source:Uniprot/SWISSPROT;Acc:Q9BT78]
16.1459 -22.04 5.95344e-06 289 5 2 7 [+] picture button
MAP2K5 ENSGACT00000022350 Dual specificity mitogen-activated protein kinase kinase 5 (EC 2.7.12.2) (MAP kinase kinase 5) (MAPKK 5) (MAPK/ERK kinase 5). [Source:Uniprot/SWISSPROT;Acc:Q13163]
16.6259 -18.05 6.17758e-06 500 5 2 6 [+] picture button
NOX5 ENSGACT00000010411 NADPH oxidase 5 (EC 1.6.3.-). [Source:Uniprot/SWISSPROT;Acc:Q96PH1]
16.2267 -17.28 6.24469e-06 500 4 1 5 [+] picture button
TMEM41A (2 of 2) ENSGACT00000008026 Transmembrane protein 41A precursor. [Source:Uniprot/SWISSPROT;Acc:Q96HV5]
17.4088 -13.87 6.65877e-06 500 11 1 14 [+] picture button
ENSGACT00000023999 CG40050-PA.3 [Source:RefSeq_peptide;Acc:NP_001015377]CG40050-PA.3 [Source:RefSeq_peptide;Acc:NP_001015377] BY ORTHOLOGY TO:CG40050-RA
17.4213 -20.57 6.83096e-06 535 4 2 6 [+] picture button
MARCH6 (2 of 2) ENSGACT00000019206 E3 ubiquitin-protein ligase MARCH6 (EC 6.3.2.-) (Membrane-associated RING finger protein 6) (Membrane-associated RING-CH protein VI) (MARCH-VI) (RING finger protein 176) (Protein TEB-4) (Doa10 homolog). [Source:Uniprot/SWISSPROT;Acc:O60337]
18.1142 -20.22 7.94195e-06 500 4 1 7 [+] picture button
RBM35B ENSGACT00000021637 RNA-binding protein 35B (RNA-binding motif protein 35B). [Source:Uniprot/SWISSPROT;Acc:Q9H6T0]
16.478 -22.45 8.39126e-06 500 5 2 7 [+] picture button
ALPL ENSGACT00000006060 Alkaline phosphatase, tissue-nonspecific isozyme precursor (EC 3.1.3.1) (AP-TNAP) (TNSALP) (Alkaline phosphatase liver/bone/kidney isozyme). [Source:Uniprot/SWISSPROT;Acc:P05186]
17.2865 -18.87 8.58788e-06 504 5 1 6 [+] picture button
C20orf108 ENSGACT00000008482 Uncharacterized protein C20orf108. [Source:Uniprot/SWISSPROT;Acc:Q96KR6]
16.2109 -21.45 9.33749e-06 500 6 2 6 [+] picture button
ETV2 ENSGACT00000016347 ETS translocation variant 2 (Ets-related protein 71). [Source:Uniprot/SWISSPROT;Acc:O00321]
16.5491 -15.17 9.89128e-06 500 11 1 14 [+] picture button
WDR60 ENSGACT00000005244 WD repeat protein 60. [Source:Uniprot/SWISSPROT;Acc:Q8WVS4]
17.7854 -16.85 1.07957e-05 500 7 1 14 [+] picture button
RPUSD1 ENSGACT00000018884 RNA pseudouridylate synthase domain containing 1 [Source:RefSeq_peptide;Acc:NP_478072]
16.0314 -20.58 1.08516e-05 340 8 1 10 [+] picture button
KCNK6 ENSGACT00000016659 Potassium channel subfamily K member 6 (Inward rectifying potassium channel protein TWIK-2) (TWIK-originated similarity sequence). [Source:Uniprot/SWISSPROT;Acc:Q9Y257]
17.7377 -12.36 1.12516e-05 74 2 3 3 [+] picture button
FGL2 (1 of 2) ENSGACT00000024966 Fibroleukin precursor (Fibrinogen-like protein 2) (pT49). [Source:Uniprot/SWISSPROT;Acc:Q14314]
17.333 -23.07 1.13587e-05 500 2 4 5 [+] picture button
C16orf42 ENSGACT00000011855 UPF0293 protein C16orf42. [Source:Uniprot/SWISSPROT;Acc:Q9UJK0]
16.3733 -16.41 1.20958e-05 157 1 1 2 [+] picture button
ESR1 ENSGACT00000011530 Estrogen receptor (ER) (Estradiol receptor) (ER-alpha). [Source:Uniprot/SWISSPROT;Acc:P03372]
17.1161 -16.81 1.20982e-05 500 4 2 5 [+] picture button
C2orf40 ENSGACT00000003992 Esophageal cancer related gene 4 protein precursor. [Source:Uniprot/SWISSPROT;Acc:Q9H1Z8]
17.1692 -14.53 1.2184e-05 203 3 1 6 [+] picture button
PREP ENSGACT00000012436 Prolyl endopeptidase (EC 3.4.21.26) (Post-proline cleaving enzyme) (PE). [Source:Uniprot/SWISSPROT;Acc:P48147]
16.6501 -15.9 1.24385e-05 490 5 2 7 [+] picture button
TMC1 ENSGACT00000015243 Transmembrane channel-like protein 1 (Transmembrane cochlear-expressed protein 1). [Source:Uniprot/SWISSPROT;Acc:Q8TDI8]
16.2727 -12.33 1.24896e-05 500 2 2 3 [+] picture button
NTF3 ENSGACT00000025413 Neurotrophin-3 precursor (NT-3) (Neurotrophic factor) (HDNF) (Nerve growth factor 2) (NGF-2). [Source:Uniprot/SWISSPROT;Acc:P20783]
16.5491 -12.52 1.51346e-05 500 5 8 4 [+] picture button
C14orf115 ENSGACT00000017112 Uncharacterized protein C14orf115. [Source:Uniprot/SWISSPROT;Acc:Q9H8Y1]
18.0535 -22.32 1.6302e-05 500 6 2 9 [+] picture button
MRPS18A ENSGACT00000017703 28S ribosomal protein S18a, mitochondrial precursor (MRP-S18-a) (Mrps18a) (MRP-S18-3). [Source:Uniprot/SWISSPROT;Acc:Q9NVS2]
16.6007 -17.74 1.68228e-05 225 2 1 2 [+] picture button
APEX2 ENSGACT00000016299 DNA-(apurinic or apyrimidinic site) lyase 2 (EC 4.2.99.18) (Apurinic- apyrimidinic endonuclease 2) (AP endonuclease 2) (APEX nuclease 2) (APEX nuclease-like 2) (AP endonuclease XTH2). [Source:Uniprot/SWISSPROT;Acc:Q9UBZ4]
16.1192 -15.43 1.69524e-05 500 6 2 7 [+] picture button
FBXL14 (1 of 2) ENSGACT00000016054 F-box/LRR-repeat protein 14 (F-box and leucine-rich repeat protein 14). [Source:Uniprot/SWISSPROT;Acc:Q8N1E6]
16.6484 -18.94 2.04223e-05 500 5 4 6 [+] picture button
SOCS3 (2 of 2) ENSGACT00000003905 Suppressor of cytokine signaling 3 (SOCS-3) (Cytokine-inducible SH2 protein 3) (CIS-3) (STAT-induced STAT inhibitor 3) (SSI-3). [Source:Uniprot/SWISSPROT;Acc:O14543]
16.3696 -14.68 2.05119e-05 500 4 3 5 [+] picture button
ENSGACT00000005966 Neuromedin-U receptor 1 (NMU-R1) (G-protein coupled receptor 66) (G- protein coupled receptor FM-3). [Source:Uniprot/SWISSPROT;Acc:Q9HB89]Neuromedin-U receptor 1 (NMU-R1) (G-protein coupled receptor 66) (G- protein coupled receptor FM-3). [Source:Uniprot/SWISSPROT;Acc:Q9HB89] BY ORTHOLOGY TO:ENSORLT00000021365
16.1192 -15.56 2.10157e-05 500 9 1 7 [+] picture button
ADRB2 (1 of 2) ENSGACT00000024447 Beta-2 adrenergic receptor (Beta-2 adrenoceptor) (Beta-2 adrenoreceptor). [Source:Uniprot/SWISSPROT;Acc:P07550]
16.764 -17.53 2.10979e-05 500 5 2 7 [+] picture button
ACVR2B (1 of 2) ENSGACT00000022089 Activin receptor type-2B precursor (EC 2.7.11.30) (Activin receptor type IIB) (ACTR-IIB). [Source:Uniprot/SWISSPROT;Acc:Q13705]
16.9789 -19.58 2.13481e-05 500 5 4 7 [+] picture button
RBM19 ENSGACT00000012529 Probable RNA-binding protein 19 (RNA-binding motif protein 19). [Source:Uniprot/SWISSPROT;Acc:Q9Y4C8]
16.7144 -18.05 2.33101e-05 215 7 2 7 [+] picture button

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Download table: GFF TXT
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