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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-let-7b

875 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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YOD1 ENSGACT00000006146 Ubiquitin thioesterase OTU1 (EC 3.1.2.-) (OTU domain-containing protein 2) (HIV-1-induced protease 7) (HIN-7) (HsHIN7). [Source:Uniprot/SWISSPROT;Acc:Q5VVQ6]
18.0849 -23.24 9.20453e-14 500 4 3 9 [+] picture button
LIN28B ENSGACT00000012454 Lin-28 homolog B. [Source:Uniprot/SWISSPROT;Acc:Q6ZN17]
17.7168 -23.3 1.67919e-13 500 4 4 6 [+] picture button
RCN1 ENSGACT00000021191 Reticulocalbin-1 precursor. [Source:Uniprot/SWISSPROT;Acc:Q15293]
16.7225 -27.33 8.91659e-09 500 6 3 9 [+] picture button
UBE2G2 ENSGACT00000000374 Ubiquitin-conjugating enzyme E2 G2 (EC 6.3.2.19) (Ubiquitin-protein ligase G2) (Ubiquitin carrier protein G2). [Source:Uniprot/SWISSPROT;Acc:P60604]
16.7144 -22.66 8.8528e-08 283 6 3 10 [+] picture button
UHRF2 ENSGACT00000022267 E3 ubiquitin-protein ligase UHRF2 (EC 6.3.2.-) (Ubiquitin-like PHD and RING finger domain-containing protein 2) (Ubiquitin-like-containing PHD and RING finger domains protein 2) (Np95/ICBP90-like RING finger protein) (Np95-like RING finger protein) (Nucle [Source:Uniprot/SWISSPROT;Acc:Q96PU4]
16.2945 -21.93 8.91282e-08 500 5 4 4 [+] picture button
NPEPL1 ENSGACT00000000634 Syntaxin-16 (Syn16). [Source:Uniprot/SWISSPROT;Acc:O14662]
16.487 -16.84 9.91459e-08 107 2 3 3 [+] picture button
TARBP2 ENSGACT00000008823 TAR RNA-binding protein 2 (Trans-activation-responsive RNA-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q15633]
16.7187 -21.82 9.98851e-08 500 3 7 6 [+] picture button
RDX ENSGACT00000019699 Radixin. [Source:Uniprot/SWISSPROT;Acc:P35241]
16.4247 -20.13 1.88192e-07 500 8 2 9 [+] picture button
ZNF644 ENSGACT00000020744 Zinc finger protein 644 (Zinc finger motif enhancer-binding protein 2) (Zep-2). [Source:Uniprot/SWISSPROT;Acc:Q9H582]
16.6855 -20.16 2.7015e-07 500 3 3 5 [+] picture button
ENSGACT00000020304 Homolog of Homo sapiens "Splice Isoform PTPS-MEB of Receptor-type tyrosine-protein phosphatase S precursor [Source:IPI;Acc:IPI00332272]"Homolog of Homo sapiens "Splice Isoform PTPS-MEB of Receptor-type tyrosine-protein phosphatase S precursor [Source:IPI;Acc:IPI00332272]" BY ORTHOLOGY TO:SINFRUT00000180296
17.2829 -20.79 4.19296e-07 320 3 4 6 [+] picture button
FAIM2 (2 of 2) ENSGACT00000000795 Fas apoptotic inhibitory molecule 2 (Lifeguard protein) (Transmembrane BAX inhibitor motif-containing protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9BWQ8]
17.154 -25.95 4.60622e-07 500 10 2 13 [+] picture button
FGF6 (1 of 2) ENSGACT00000026345 Fibroblast growth factor 6 precursor (FGF-6) (HBGF-6) (HST-2). [Source:Uniprot/SWISSPROT;Acc:P10767]
17.2674 -21.39 5.19952e-07 500 7 4 13 [+] picture button
ARL5B ENSGACT00000005335 ADP-ribosylation factor-like protein 5B (ADP-ribosylation factor-like protein 8). [Source:Uniprot/SWISSPROT;Acc:Q96KC2]
16.3342 -26.91 6.15367e-07 500 7 2 9 [+] picture button
ATP2A2 (2 of 2) ENSGACT00000017795 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (EC 3.6.3.8) (Calcium pump 2) (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase). [Source:Uniprot/SWISSPROT;Acc:P16615]
17.0576 -20.26 7.01176e-07 500 2 9 4 [+] picture button
ACVR1B (1 of 2) ENSGACT00000011949 Activin receptor type 1B precursor (EC 2.7.11.30) (ACTR-IB) (Serine/threonine-protein kinase receptor R2) (SKR2) (Activin receptor-like kinase 4) (ALK-4). [Source:Uniprot/SWISSPROT;Acc:P36896]
16.2308 -18.59 8.22493e-07 500 7 7 9 [+] picture button
VPS13D ENSGACT00000016812 Vacuolar protein sorting-associated protein 13D. [Source:Uniprot/SWISSPROT;Acc:Q5THJ4]
16.1643 -26.56 9.16993e-07 624 5 2 6 [+] picture button
HBEGF ENSGACT00000024318 Heparin-binding EGF-like growth factor precursor (HB-EGF) (HBEGF) (Diphtheria toxin receptor) (DT-R). [Source:Uniprot/SWISSPROT;Acc:Q99075]
17.1617 -15.46 1e-06 500 5 3 8 [+] picture button
ENSGACT00000013727 NOT ANNOTATED
19.2004 -25.89 1e-06 500 11 1 3 [+] picture button
VAC14 ENSGACT00000013506 Vac14 homolog [Source:RefSeq_peptide;Acc:NP_060522]
16.2123 -22.81 1.3666e-06 500 7 3 8 [+] picture button
NEU3 ENSGACT00000027421 Sialidase-3 (EC 3.2.1.18) (Membrane sialidase) (Ganglioside sialidase) (N-acetyl-alpha-neuraminidase 3). [Source:Uniprot/SWISSPROT;Acc:Q9UQ49]
16.2267 -15.78 1.48093e-06 500 6 1 10 [+] picture button
PRKCQ ENSGACT00000026600 Protein kinase C theta type (EC 2.7.11.13) (nPKC-theta). [Source:Uniprot/SWISSPROT;Acc:Q04759]
17.3441 -28.84 1.80558e-06 500 5 1 8 [+] picture button
NFXL1 ENSGACT00000000394 NF-X1-type zinc finger protein NFXL1 (Ovarian zinc finger protein) (hOZFP). [Source:Uniprot/SWISSPROT;Acc:Q6ZNB6]
16.4205 -25.62 3.48511e-06 493 5 1 6 [+] picture button
KIAA0274 ENSGACT00000015251 SAC domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q92562]
16.9921 -19.01 3.74323e-06 310 6 1 13 [+] picture button
PPP1R15B ENSGACT00000008886 protein phosphatase 1, regulatory subunit 15B [Source:RefSeq_peptide;Acc:NP_116222]
16.2583 -23.81 5.06115e-06 628 5 1 8 [+] picture button
EIF2C1 ENSGACT00000016486 Eukaryotic translation initiation factor 2C 1 (eIF2C 1) (eIF-2C 1) (Argonaute-1) (Putative RNA-binding protein Q99). [Source:Uniprot/SWISSPROT;Acc:Q9UL18]
16.6179 -23.6 5.76524e-06 500 5 2 8 [+] picture button
ANAPC7 ENSGACT00000017805 Anaphase-promoting complex subunit 7 (APC7) (Cyclosome subunit 7). [Source:Uniprot/SWISSPROT;Acc:Q9UJX3]
16.1939 -18.91 5.82905e-06 500 6 1 7 [+] picture button
MAP2K5 ENSGACT00000022350 Dual specificity mitogen-activated protein kinase kinase 5 (EC 2.7.12.2) (MAP kinase kinase 5) (MAPKK 5) (MAPK/ERK kinase 5). [Source:Uniprot/SWISSPROT;Acc:Q13163]
16.8432 -18.62 6.17758e-06 500 5 2 6 [+] picture button
NOX5 ENSGACT00000010411 NADPH oxidase 5 (EC 1.6.3.-). [Source:Uniprot/SWISSPROT;Acc:Q96PH1]
16.5491 -19.75 6.24469e-06 500 4 1 5 [+] picture button
TMEM41A (2 of 2) ENSGACT00000008026 Transmembrane protein 41A precursor. [Source:Uniprot/SWISSPROT;Acc:Q96HV5]
17.0864 -16.36 6.65877e-06 500 11 1 14 [+] picture button
ENSGACT00000023999 CG40050-PA.3 [Source:RefSeq_peptide;Acc:NP_001015377]CG40050-PA.3 [Source:RefSeq_peptide;Acc:NP_001015377] BY ORTHOLOGY TO:CG40050-RA
16.5663 -19.36 6.83096e-06 535 4 2 6 [+] picture button
STX18 ENSGACT00000011020 Syntaxin-18 (Cell growth-inhibiting gene 9 protein). [Source:Uniprot/SWISSPROT;Acc:Q9P2W9]
16.7931 -21.65 7.38765e-06 500 4 3 6 [+] picture button
TMC3 ENSGACT00000016540 Transmembrane channel-like protein 3. [Source:Uniprot/SWISSPROT;Acc:Q7Z5M5]
16.5491 -22.28 7.71544e-06 500 5 1 4 [+] picture button
MARCH6 (2 of 2) ENSGACT00000019206 E3 ubiquitin-protein ligase MARCH6 (EC 6.3.2.-) (Membrane-associated RING finger protein 6) (Membrane-associated RING-CH protein VI) (MARCH-VI) (RING finger protein 176) (Protein TEB-4) (Doa10 homolog). [Source:Uniprot/SWISSPROT;Acc:O60337]
17.2412 -22.19 7.94195e-06 500 4 1 7 [+] picture button
ALPL ENSGACT00000006060 Alkaline phosphatase, tissue-nonspecific isozyme precursor (EC 3.1.3.1) (AP-TNAP) (TNSALP) (Alkaline phosphatase liver/bone/kidney isozyme). [Source:Uniprot/SWISSPROT;Acc:P05186]
17.5013 -21.14 8.58788e-06 504 5 1 6 [+] picture button
C20orf108 ENSGACT00000008482 Uncharacterized protein C20orf108. [Source:Uniprot/SWISSPROT;Acc:Q96KR6]
17.2989 -24.23 9.33749e-06 500 6 2 6 [+] picture button
ETV2 ENSGACT00000016347 ETS translocation variant 2 (Ets-related protein 71). [Source:Uniprot/SWISSPROT;Acc:O00321]
16.2267 -16.94 9.89128e-06 500 11 1 14 [+] picture button
WDR60 ENSGACT00000005244 WD repeat protein 60. [Source:Uniprot/SWISSPROT;Acc:Q8WVS4]
16.9231 -15.77 1.07957e-05 500 7 1 14 [+] picture button
KCNK6 ENSGACT00000016659 Potassium channel subfamily K member 6 (Inward rectifying potassium channel protein TWIK-2) (TWIK-originated similarity sequence). [Source:Uniprot/SWISSPROT;Acc:Q9Y257]
16.8281 -11.79 1.12516e-05 74 2 3 3 [+] picture button
FGL2 (1 of 2) ENSGACT00000024966 Fibroleukin precursor (Fibrinogen-like protein 2) (pT49). [Source:Uniprot/SWISSPROT;Acc:Q14314]
17.5497 -24.47 1.13587e-05 500 2 4 5 [+] picture button
GIPC2 ENSGACT00000021933 PDZ domain-containing protein GIPC2. [Source:Uniprot/SWISSPROT;Acc:Q8TF65]
16.687 -26.89 1.20183e-05 851 3 2 3 [+] picture button
C16orf42 ENSGACT00000011855 UPF0293 protein C16orf42. [Source:Uniprot/SWISSPROT;Acc:Q9UJK0]
16.2596 -13.25 1.20958e-05 157 1 1 2 [+] picture button
ESR1 ENSGACT00000011530 Estrogen receptor (ER) (Estradiol receptor) (ER-alpha). [Source:Uniprot/SWISSPROT;Acc:P03372]
17.1161 -19.43 1.20982e-05 500 4 2 5 [+] picture button
C2orf40 ENSGACT00000003992 Esophageal cancer related gene 4 protein precursor. [Source:Uniprot/SWISSPROT;Acc:Q9H1Z8]
17.8514 -25.03 1.2184e-05 203 3 1 6 [+] picture button
PREP ENSGACT00000012436 Prolyl endopeptidase (EC 3.4.21.26) (Post-proline cleaving enzyme) (PE). [Source:Uniprot/SWISSPROT;Acc:P48147]
16.8678 -13.92 1.24385e-05 490 5 2 7 [+] picture button
TMC1 ENSGACT00000015243 Transmembrane channel-like protein 1 (Transmembrane cochlear-expressed protein 1). [Source:Uniprot/SWISSPROT;Acc:Q8TDI8]
16.4896 -16.13 1.24896e-05 500 2 2 3 [+] picture button
FRMPD1 ENSGACT00000024503 FERM and PDZ domain containing 1 [Source:RefSeq_peptide;Acc:NP_055722]
16.4165 -21.04 1.25395e-05 500 9 3 11 [+] picture button
ENSGACT00000009596 tetratricopeptide repeat protein, putativetetratricopeptide repeat protein, putative BY ORTHOLOGY TO:AAEL008743-RA
16.2267 -18.44 1.25863e-05 500 2 1 2 [+] picture button
C14orf115 ENSGACT00000017112 Uncharacterized protein C14orf115. [Source:Uniprot/SWISSPROT;Acc:Q9H8Y1]
18.5909 -23.66 1.6302e-05 500 6 2 9 [+] picture button
Q3SY89_HUMAN ENSGACT00000002722 Transcription elongation factor B polypeptide 3C (Elongin A3). [Source:Uniprot/SPTREMBL;Acc:Q3SY89]
16.656 -23.2 1.63236e-05 500 3 1 5 [+] picture button
HOXD3 ENSGACT00000006018 Homeobox protein Hox-D3 (Hox-4A). [Source:Uniprot/SWISSPROT;Acc:P31249]
17.0517 -22.17 1.90709e-05 500 10 4 20 [+] picture button

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Download table: GFF TXT
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