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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and dre-miR-93

895 hits found.


Page 1 of 18
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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BAMBI ENSGACT00000002180 BMP and activin membrane-bound inhibitor homolog precursor (Putative transmembrane protein NMA) (Non-metastatic gene A protein). [Source:Uniprot/SWISSPROT;Acc:Q13145]
16.8678 -13.02 8.06131e-10 500 5 13 13 [+] picture button
ARHGEF4 ENSGACT00000000134 Rho guanine nucleotide exchange factor 4 (APC-stimulated guanine nucleotide exchange factor) (Asef). [Source:Uniprot/SWISSPROT;Acc:Q9NR80]
17.7312 -13.81 1.47061e-09 500 9 2 18 [+] picture button
MAP3K9 ENSGACT00000016074 Mitogen-activated protein kinase kinase kinase 9 (EC 2.7.11.25) (Mixed lineage kinase 1). [Source:Uniprot/SWISSPROT;Acc:P80192]
17.1349 -10.9 1.05965e-07 500 4 3 7 [+] picture button
ZC3H12C (2 of 2) ENSGACT00000001736 Zinc finger CCCH-type-containing protein 12C (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9C0D7]
16.931 -24.46 1.20457e-07 500 8 3 15 [+] picture button
SLAIN2 ENSGACT00000018733 SLAIN2 protein. [Source:Uniprot/SPTREMBL;Acc:Q8N5R3]
18.0788 -18.4 1.37401e-07 500 5 1 11 [+] picture button
PERQ1 ENSGACT00000026373 PERQ amino acid-rich with GYF domain-containing protein 1 (Grb10- interacting GYF protein 1). [Source:Uniprot/SWISSPROT;Acc:O75420]
17.7182 -16.55 2.48336e-07 500 7 3 15 [+] picture button
CLIP4 ENSGACT00000016988 CAP-Gly domain-containing linker protein 4 (Restin-like protein 2). [Source:Uniprot/SWISSPROT;Acc:Q8N3C7]
17.3013 -12.87 2.88707e-07 500 7 9 18 [+] picture button
ARID4B ENSGACT00000005700 AT-rich interactive domain-containing protein 4B (ARID domain- containing protein 4B) (Histone deacetylase complex subunit SAP180) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Retinoblastoma-binding protein 1-like 1) (Breast c [Source:Uniprot/SWISSPROT;Acc:Q4LE39]
17.3412 -16.02 3.44566e-07 500 5 11 10 [+] picture button
DOCK4 ENSGACT00000025068 Dedicator of cytokinesis protein 4. [Source:Uniprot/SWISSPROT;Acc:Q8N1I0]
18.0746 -18.4 6.00332e-07 500 4 5 10 [+] picture button
USP46 ENSGACT00000018813 Ubiquitin carboxyl-terminal hydrolase 46 (EC 3.1.2.15) (Ubiquitin thioesterase 46) (Ubiquitin-specific-processing protease 46) (Deubiquitinating enzyme 46). [Source:Uniprot/SWISSPROT;Acc:P62068]
18.5161 -24.16 7.39788e-07 500 6 2 10 [+] picture button
PDE8B ENSGACT00000020838 High-affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B (EC 3.1.4.17) (HSPDE8B). [Source:Uniprot/SWISSPROT;Acc:O95263]
18.351 -20.09 1.03222e-06 500 7 1 13 [+] picture button
MSRA ENSGACT00000007973 Peptide methionine sulfoxide reductase (EC 1.8.4.11) (Protein- methionine-S-oxide reductase) (PMSR) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase). [Source:Uniprot/SWISSPROT;Acc:Q9UJ68]
16.7895 -16.13 1.40915e-06 664 4 1 7 [+] picture button
SLC2A4 ENSGACT00000025675 Solute carrier family 2, facilitated glucose transporter member 4 (Glucose transporter type 4, insulin-responsive). [Source:Uniprot/SWISSPROT;Acc:P14672]
17.5855 -15.68 1.52468e-06 500 3 3 3 [+] picture button
CPEB3 ENSGACT00000003864 Cytoplasmic polyadenylation element-binding protein 3 (CPE-binding protein 3) (CPE-BP3) (hCPEB-3). [Source:Uniprot/SWISSPROT;Acc:Q8NE35]
17.3244 -12.39 1.75265e-06 500 4 1 11 [+] picture button
PKNOX1 ENSGACT00000001886 Homeobox protein PKNOX1 (PBX/knotted homeobox 1) (Homeobox protein PREP-1). [Source:Uniprot/SWISSPROT;Acc:P55347]
17.2813 -15.19 1.92956e-06 500 5 4 9 [+] picture button
WEE1 ENSGACT00000012920 Wee1-like protein kinase (EC 2.7.10.2) (Wee1A kinase) (WEE1hu). [Source:Uniprot/SWISSPROT;Acc:P30291]
17.4088 -15.66 1.94639e-06 500 8 3 14 [+] picture button
USE1_HUMAN ENSGACT00000013890 Vesicle transport protein USE1 (USE1-like protein) (Putative MAPK- activating protein PM26) (Protein p31). [Source:Uniprot/SWISSPROT;Acc:Q9NZ43]
16.7527 -16.75 2.57552e-06 500 3 2 5 [+] picture button
HS3ST5 ENSGACT00000008390 Heparan sulfate glucosamine 3-O-sulfotransferase 5 (EC 2.8.2.23) (Heparan sulfate D-glucosaminyl 3-O-sulfotransferase 5) (Heparan sulfate 3-O-sulfotransferase 5) (h3-OST-5). [Source:Uniprot/SWISSPROT;Acc:Q8IZT8]
16.6565 -11.31 2.77449e-06 500 5 2 10 [+] picture button
SMAD2 ENSGACT00000017652 Mothers against decapentaplegic homolog 2 (SMAD 2) (Mothers against DPP homolog 2) (Mad-related protein 2) (hMAD-2) (JV18-1) (hSMAD2). [Source:Uniprot/SWISSPROT;Acc:Q15796]
16.8363 -10.41 2.79778e-06 500 3 4 9 [+] picture button
PLEKHB2 ENSGACT00000014629 Pleckstrin homology domain-containing family B member 2 (Evectin-2). [Source:Uniprot/SWISSPROT;Acc:Q96CS7]
17.374 -16.54 2.94556e-06 500 2 2 7 [+] picture button
DDEF2 ENSGACT00000011859 Development and differentiation-enhancing factor 2 (Pyk2 C-terminus- associated protein) (PAP) (Paxillin-associated protein with ARFGAP activity 3) (PAG3). [Source:Uniprot/SWISSPROT;Acc:O43150]
17.9461 -19.72 3.02437e-06 500 7 3 10 [+] picture button
ALAS2 ENSGACT00000009067 5-aminolevulinate synthase, erythroid-specific, mitochondrial precursor (EC 2.3.1.37) (5-aminolevulinic acid synthase) (Delta- aminolevulinate synthase) (Delta-ALA synthetase) (ALAS-E). [Source:Uniprot/SWISSPROT;Acc:P22557]
20.8077 -27.53 4.39663e-06 261 5 3 11 [+] picture button
NBEAL2 ENSGACT00000011451 SQFE253. [Source:Uniprot/SPTREMBL;Acc:Q6UX91]
16.4847 -14.77 5.58864e-06 636 7 7 13 [+] picture button
OBFC2A ENSGACT00000003011 oligonucleotide/oligosaccharide-binding fold containing 2A [Source:RefSeq_peptide;Acc:NP_001026886]
16.7224 -12.59 5.64817e-06 500 6 2 9 [+] picture button
NP_001034869.1 ENSGACT00000027470 similar to cyclin I (FLJ16793), mRNA [Source:RefSeq_dna;Acc:NM_001039780]
16.7427 -16.29 5.77251e-06 500 2 2 6 [+] picture button
WBSCR22 ENSGACT00000013170 Putative methyltransferase WBSCR22 (EC 2.1.1.-) (Williams-Beuren syndrome chromosome region 22 protein). [Source:Uniprot/SWISSPROT;Acc:O43709]
17.0172 -21.17 6.61441e-06 306 4 3 14 [+] picture button
KLHL14 ENSGACT00000023703 Kelch-like protein 14. [Source:Uniprot/SWISSPROT;Acc:Q9P2G3]
16.4284 -13.63 8.75904e-06 500 4 5 6 [+] picture button
CPEB4 (1 of 2) ENSGACT00000027066 Cytoplasmic polyadenylation element-binding protein 4 (CPE-binding protein 4) (CPE-BP4) (hCPEB-4). [Source:Uniprot/SWISSPROT;Acc:Q17RY0]
18.3295 -21.08 9.03916e-06 500 6 4 10 [+] picture button
CDKN3 ENSGACT00000015618 Cyclin-dependent kinase inhibitor 3 (EC 3.1.3.48) (EC 3.1.3.16) (CDK2- associated dual-specificity phosphatase) (Kinase-associated phosphatase) (Cyclin-dependent kinase-interacting protein 2) (Cyclin- dependent kinase interactor 1). [Source:Uniprot/SWISSPROT;Acc:Q16667]
17.0864 -10.82 9.04588e-06 500 6 1 14 [+] picture button
ASB9 ENSGACT00000005085 Ankyrin repeat and SOCS box protein 9 (ASB-9). [Source:Uniprot/SWISSPROT;Acc:Q96DX5]
17.893 -18.66 1.04787e-05 514 3 1 5 [+] picture button
EGR1 ENSGACT00000024011 Early growth response protein 1 (EGR-1) (Krox-24 protein) (Transcription factor Zif268) (Nerve growth factor-induced protein A) (NGFI-A) (Transcription factor ETR103) (Zinc finger protein 225) (AT225). [Source:Uniprot/SWISSPROT;Acc:P18146]
17.9461 -16.15 1.13127e-05 500 7 4 13 [+] picture button
Q96CK5_HUMAN ENSGACT00000012060 Homolog of Homo sapiens "PREDICTED "KIAA0226 gene product [Source:IPI;Acc:IPI00022496]"Homolog of Homo sapiens "PREDICTED "KIAA0226 gene product [Source:IPI;Acc:IPI00022496]" BY ORTHOLOGY TO:SINFRUT00000163195
17.0121 -12.94 1.14618e-05 500 7 3 10 [+] picture button
TBX3 ENSGACT00000022201 T-box transcription factor TBX3 (T-box protein 3). [Source:Uniprot/SWISSPROT;Acc:O15119]
16.7836 -11.99 1.15491e-05 500 4 4 9 [+] picture button
GAB3 ENSGACT00000026926 Gab3 protein isoform 2 [Source:RefSeq_peptide;Acc:NP_542179]
16.8281 -12.5 1.17712e-05 134 3 1 11 [+] picture button
SLC18A2 ENSGACT00000002823 Synaptic vesicular amine transporter (Monoamine transporter) (Vesicular amine transporter 2) (VAT2) (Solute carrier family 18 member 2). [Source:Uniprot/SWISSPROT;Acc:Q05940]
17.4582 -12.92 1.18869e-05 500 7 1 13 [+] picture button
ST5 ENSGACT00000020696 Suppression of tumorigenicity 5 (HeLa tumor suppression 1) (DENN domain-containing protein 2B). [Source:Uniprot/SWISSPROT;Acc:P78524]
17.7312 -18.45 1.22029e-05 500 7 1 10 [+] picture button
ANUBL1 ENSGACT00000010290 AN1-type zinc finger and ubiquitin domain-containing protein 1 (AN1- type zinc finger protein 4). [Source:Uniprot/SWISSPROT;Acc:Q86XD8]
17.3489 -16.18 1.25696e-05 450 8 3 19 [+] picture button
UBE2W ENSGACT00000003616 Probable ubiquitin-conjugating enzyme E2 W (EC 6.3.2.19) (Ubiquitin- protein ligase W) (Ubiquitin carrier protein W). [Source:Uniprot/SWISSPROT;Acc:Q96B02]
19.0175 -20.62 1.47426e-05 500 8 6 17 [+] picture button
CAMK2N1 ENSGACT00000010326 calcium/calmodulin-dependent protein kinase II inhibitor 1 [Source:RefSeq_peptide;Acc:NP_061054]
17.7664 -19.97 1.54856e-05 464 7 1 12 [+] picture button
ULK2 ENSGACT00000017924 Serine/threonine-protein kinase ULK2 (EC 2.7.11.1) (Unc-51-like kinase 2). [Source:Uniprot/SWISSPROT;Acc:Q8IYT8]
17.4091 -23.32 1.56684e-05 500 3 2 8 [+] picture button
SOCS6 ENSGACT00000003542 Suppressor of cytokine signaling 6 (SOCS-6) (Suppressor of cytokine signaling 4) (SOCS-4) (Cytokine-inducible SH2 protein 4) (CIS-4). [Source:Uniprot/SWISSPROT;Acc:O14544]
16.9008 -14.22 1.58958e-05 500 4 5 5 [+] picture button
NARG2 ENSGACT00000014158 NMDA receptor regulated 2 isoform a [Source:RefSeq_peptide;Acc:NP_078887]
18.0987 -15.57 1.66675e-05 332 6 2 16 [+] picture button
LSM1 ENSGACT00000015592 U6 snRNA-associated Sm-like protein LSm1 (Small nuclear ribonuclear CaSm) (Cancer-associated Sm-like). [Source:Uniprot/SWISSPROT;Acc:O15116]
16.8715 -15.75 2.07819e-05 500 8 4 13 [+] picture button
ENSGACT00000010977 Homolog of Gallus gallus "Serine/threonine-protein kinase SNF1-like kinase 2 (EC 2.7.1.37) (Qin- induced kinase). [Source:Uniprot/SWISSPROT;Acc:Q9IA88]"Homolog of Gallus gallus "Serine/threonine-protein kinase SNF1-like kinase 2 (EC 2.7.1.37) (Qin- induced kinase). [Source:Uniprot/SWISSPROT;Acc:Q9IA88]" BY ORTHOLOGY TO:SINFRUT00000149706
17.1578 -15.57 2.11503e-05 500 7 3 12 [+] picture button
FASTK ENSGACT00000001955 Fas-activated serine/threonine kinase (EC 2.7.11.8) (FAST kinase). [Source:Uniprot/SWISSPROT;Acc:Q14296]
16.4276 -17.13 2.16163e-05 504 4 1 4 [+] picture button
ZNF238 ENSGACT00000013932 Zinc finger protein 238 (Transcriptional repressor RP58) (58 kDa repressor protein) (Zinc finger protein C2H2-171) (Translin-associated zinc finger protein 1) (TAZ-1) (Zinc finger and BTB domain-containing protein 18). [Source:Uniprot/SWISSPROT;Acc:Q99592]
16.9116 -13.43 2.27195e-05 500 5 10 10 [+] picture button
GPS1 ENSGACT00000005671 COP9 signalosome complex subunit 1 (Signalosome subunit 1) (SGN1) (JAB1-containing signalosome subunit 1) (G protein pathway suppressor 1) (Protein GPS1) (Protein MFH). [Source:Uniprot/SWISSPROT;Acc:Q13098]
16.6007 -14 2.29625e-05 271 4 4 10 [+] picture button
PLEKHG5 ENSGACT00000014805 Tumor necrosis factor receptor superfamily member 25 precursor (WSL-1 protein) (Apoptosis-mediating receptor DR3) (Apoptosis-mediating receptor TRAMP) (Death domain receptor 3) (WSL protein) (Apoptosis- inducing receptor AIR) (Apo-3) (Lymphocyte-associate [Source:Uniprot/SWISSPROT;Acc:Q93038]
16.8574 -12.55 2.30509e-05 381 8 2 18 [+] picture button
E2F5 ENSGACT00000022514 Transcription factor E2F5 (E2F-5). [Source:Uniprot/SWISSPROT;Acc:Q15329]
16.4416 -15.62 2.45553e-05 500 9 4 13 [+] picture button
HN1 (2 of 2) ENSGACT00000016297 Hematological and neurological expressed 1 protein (Androgen-regulated protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9UK76]
17.4333 -17.5 2.81823e-05 500 5 3 11 [+] picture button

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Download table: GFF TXT
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