spacer

Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and dre-miR-34c

811 hits found.


Page 1 of 17
1 2 3 4 5 6 7 8 9 10 11 .. 17 next >>

Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
picture button picture button picture button picture button picture button picture button picture button picture button picture button picture button
DDX17 (1 of 2) ENSGACT00000025371 Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-) (DEAD box protein 17) (RNA-dependent helicase p72) (DEAD box protein p72). [Source:Uniprot/SWISSPROT;Acc:Q92841]
16.5224 -18.72 0.0000000747725 500 7 2 12 [+] picture button
TAF4B ENSGACT00000003863 Transcription initiation factor TFIID subunit 4B (Transcription initiation factor TFIID 105 kDa subunit) (TAFII-105) (TAFII105). [Source:Uniprot/SWISSPROT;Acc:Q92750]
16.4704 -14.19 0.0000000812978 500 7 4 7 [+] picture button
SLC30A3 (1 of 2) ENSGACT00000016110 Zinc transporter 3 (ZnT-3) (Solute carrier family 30 member 3). [Source:Uniprot/SWISSPROT;Acc:Q99726]
17.0052 -20.79 0.000000130728 500 2 1 3 [+] picture button
SPATA13 ENSGACT00000004008 Spermatogenesis-associated protein 13. [Source:Uniprot/SWISSPROT;Acc:Q96N96]
16.9296 -16.8 0.000000182361 500 2 1 6 [+] picture button
FKBP1B ENSGACT00000016384 FK506-binding protein 1B (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase 1B) (PPIase 1B) (Rotamase 1B) (12.6 kDa FKBP) (FKBP-12.6) (Immunophilin FKBP12.6) (h-FKBP-12). [Source:Uniprot/SWISSPROT;Acc:P68106]
17.0906 -22.53 0.000000323471 603 10 7 11 [+] picture button
RALGPS2 ENSGACT00000019284 Ral GEF with PH domain and SH3 binding motif 2 isoform 2 [Source:RefSeq_peptide;Acc:NP_689876]
16.5579 -14.39 0.000000330401 500 3 8 5 [+] picture button
PIF1 ENSGACT00000020626 Uncharacterized protein C15orf20. [Source:Uniprot/SWISSPROT;Acc:Q9H611]
17.196 -15.56 0.000000385734 249 9 4 16 [+] picture button
ST6GAL1 ENSGACT00000027590 CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,6-sialyltransferase (EC 2.4.99.1) (Beta-galactoside alpha-2,6-sialyltransferase) (Alpha 2,6-ST) (Sialyltransferase 1) (ST6Gal I) (B-cell antigen CD75). [Source:Uniprot/SWISSPROT;Acc:P15907]
16.6661 -14.49 0.000000596401 500 8 1 13 [+] picture button
C20orf117 ENSGACT00000007432 Uncharacterized protein C20orf117. [Source:Uniprot/SWISSPROT;Acc:O94964]
16.665 -19.48 0.000001 500 7 3 6 [+] picture button
NTRK3 (1 of 2) ENSGACT00000019558 NT-3 growth factor receptor precursor (EC 2.7.10.1) (Neurotrophic tyrosine kinase receptor type 3) (TrkC tyrosine kinase) (GP145-TrkC) (Trk-C). [Source:Uniprot/SWISSPROT;Acc:Q16288]
18.2142 -18.88 0.00000152664 130 4 5 4 [+] picture button
PPP2R3A ENSGACT00000014489 Serine/threonine-protein phosphatase 2A 72/130 kDa regulatory subunit B (PP2A, subunit B, B''-PR72/PR130) (PP2A, subunit B, B72/B130 isoforms) (PP2A, subunit B, PR72/PR130 isoforms) (PP2A, subunit B, R3 isoform). [Source:Uniprot/SWISSPROT;Acc:Q06190]
17.4631 -18.78 0.00000161978 500 5 2 8 [+] picture button
ING5 ENSGACT00000014655 Inhibitor of growth protein 5 (p28ING5). [Source:Uniprot/SWISSPROT;Acc:Q8WYH8]
16.5025 -17.57 0.00000164196 500 5 1 7 [+] picture button
ENSGACT00000021623 Complexin-2 (Complexin II) (CPX II) (Synaphin-1). [Source:Uniprot/SWISSPROT;Acc:P84087]Complexin-2 (Complexin II) (CPX II) (Synaphin-1). [Source:Uniprot/SWISSPROT;Acc:P84087] BY ORTHOLOGY TO:ENSRNOT00000039898
18.5025 -21.11 0.00000179257 500 5 2 6 [+] picture button
TNC (1 of 2) ENSGACT00000007012 Tenascin precursor (TN) (Tenascin-C) (TN-C) (Hexabrachion) (Cytotactin) (Neuronectin) (GMEM) (JI) (Myotendinous antigen) (Glioma- associated-extracellular matrix antigen) (GP 150-225). [Source:Uniprot/SWISSPROT;Acc:P24821]
17.5404 -19.32 0.00000240594 500 6 5 10 [+] picture button
IGFBP6 (2 of 2) ENSGACT00000014167 Insulin-like growth factor-binding protein 6 precursor (IGFBP-6) (IBP- 6) (IGF-binding protein 6). [Source:Uniprot/SWISSPROT;Acc:P24592]
17.8446 -22.9 0.00000262722 500 9 3 13 [+] picture button
MRPL33 ENSGACT00000017088 Mitochondrial 39S ribosomal protein L33 (L33mt) (MRP-L33). [Source:Uniprot/SWISSPROT;Acc:O75394]
16.6116 -17.47 0.00000304569 314 9 2 11 [+] picture button
COPS4 ENSGACT00000020762 COP9 signalosome complex subunit 4 (Signalosome subunit 4) (SGN4) (JAB1-containing signalosome subunit 4). [Source:Uniprot/SWISSPROT;Acc:Q9BT78]
16.9697 -19.12 0.00000319106 289 5 2 7 [+] picture button
MTP18_HUMAN ENSGACT00000022191 Mitochondrial 18 kDa protein (MTP18). [Source:Uniprot/SWISSPROT;Acc:Q9UDX5]
16.2565 -13.69 0.00000385441 500 4 1 5 [+] picture button
VEPH1 ENSGACT00000009450 ventricular zone expressed PH domain homolog 1 [Source:RefSeq_peptide;Acc:NP_078897]
16.6843 -16 0.00000387453 500 6 1 7 [+] picture button
AMN ENSGACT00000014551 Amnionless protein precursor. [Source:Uniprot/SWISSPROT;Acc:Q9BXJ7]
16.2565 -22 0.00000394276 500 5 2 7 [+] picture button
BBOX1 ENSGACT00000022709 Gamma-butyrobetaine dioxygenase (EC 1.14.11.1) (Gamma-butyrobetaine,2- oxoglutarate dioxygenase) (Gamma-butyrobetaine hydroxylase) (Gamma- BBH). [Source:Uniprot/SWISSPROT;Acc:O75936]
16.3989 -21.32 0.00000541999 500 6 2 12 [+] picture button
MYCN ENSGACT00000012219 N-myc proto-oncogene protein. [Source:Uniprot/SWISSPROT;Acc:P04198]
16.0942 -15.28 0.00000568399 500 4 11 8 [+] picture button
VPS11 ENSGACT00000026623 Vacuolar protein sorting-associated protein 11 homolog (hVPS11) (RING finger protein 108). [Source:Uniprot/SWISSPROT;Acc:Q9H270]
16.2666 -18.4 0.00000743321 304 7 2 18 [+] picture button
PGAP1_HUMAN ENSGACT00000002182 GPI inositol-deacylase (EC 3.1.-.-) (hPGAP1). [Source:Uniprot/SWISSPROT;Acc:Q75T13]
16.3635 -17.82 0.000007555 500 5 4 7 [+] picture button
MRPS7 ENSGACT00000016252 28S ribosomal protein S7, mitochondrial precursor (S7mt) (MRP-S7) (bMRP27a) (bMRP-27a). [Source:Uniprot/SWISSPROT;Acc:Q9Y2R9]
16.7204 -19.09 0.00000776018 500 4 1 5 [+] picture button
CDC7 ENSGACT00000020737 Cell division cycle 7-related protein kinase (EC 2.7.11.1) (CDC7- related kinase) (HsCdc7) (huCdc7). [Source:Uniprot/SWISSPROT;Acc:O00311]
16.1496 -19.58 0.00000826411 500 7 1 10 [+] picture button
JHDM1D ENSGACT00000026440 JmjC domain-containing histone demethylation protein 1D. [Source:Uniprot/SWISSPROT;Acc:Q6ZMT4]
16.7916 -17.57 0.00000871651 500 5 3 5 [+] picture button
UNC93A ENSGACT00000008919 UNC93 homolog A (UNC-93A protein) (HmUNC-93A). [Source:Uniprot/SWISSPROT;Acc:Q86WB7]
16.3635 -19.3 0.00000915202 500 6 1 15 [+] picture button
NOTCH1 (1 of 2) ENSGACT00000018493 Neurogenic locus notch homolog protein 1 precursor (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Contains: Notch 1 extracellular truncation; Notch 1 intracellular domain]. [Source:Uniprot/SWISSPROT;Acc:P46531]
16.257 -16.13 0.00000958912 500 11 3 15 [+] picture button
AP3B2 ENSGACT00000009656 AP-3 complex subunit beta-2 (Adapter-related protein complex 3 beta-2 subunit) (Beta3B-adaptin) (Adaptor protein complex AP-3 beta-2 subunit) (AP-3 complex beta-2 subunit) (Clathrin assembly protein complex 3 beta-2 large chain) (Neuron-specific vesicle c [Source:Uniprot/SWISSPROT;Acc:Q13367]
16.6843 -17.83 0.0000114537 500 8 1 10 [+] picture button
ZG14_HUMAN ENSGACT00000009581 Gastric cancer antigen Zg14. [Source:Uniprot/SWISSPROT;Acc:Q9Y3A4]
16.8566 -14.47 0.0000119143 55 2 2 5 [+] picture button
STX18 ENSGACT00000011020 Syntaxin-18 (Cell growth-inhibiting gene 9 protein). [Source:Uniprot/SWISSPROT;Acc:Q9P2W9]
16.0703 -15.37 0.0000120569 500 4 3 6 [+] picture button
HECW2 (1 of 2) ENSGACT00000020078 E3 ubiquitin-protein ligase HECW2 (EC 6.3.2.-) (HECT, C2 and WW domain-containing protein 2) (NEDD4-like ubiquitin-protein ligase 2). [Source:Uniprot/SWISSPROT;Acc:Q9P2P5]
16.9385 -18.98 0.0000124879 500 5 2 7 [+] picture button
E2F5 ENSGACT00000022514 Transcription factor E2F5 (E2F-5). [Source:Uniprot/SWISSPROT;Acc:Q15329]
16.4704 -19.52 0.0000128405 500 9 4 13 [+] picture button
MAPKAP1 ENSGACT00000024291 Stress-activated map kinase-interacting protein 1 (SAPK-interacting protein 1) (Putative Ras inhibitor JC310). [Source:Uniprot/SWISSPROT;Acc:Q9BPZ7]
16.6843 -22.35 0.0000130767 500 4 1 7 [+] picture button
KHK ENSGACT00000004083 Ketohexokinase (EC 2.7.1.3) (Hepatic fructokinase). [Source:Uniprot/SWISSPROT;Acc:P50053]
16.4041 -16.17 0.0000131489 299 4 1 5 [+] picture button
ENSGACT00000010523 Putative tenascin X. [Source:Uniprot/SPTREMBL;Acc:Q7SZG1]Putative tenascin X. [Source:Uniprot/SPTREMBL;Acc:Q7SZG1] BY ORTHOLOGY TO:SINFRUT00000138233
18.3849 -22.21 0.0000172421 383 6 4 10 [+] picture button
CACNA1E (1 of 2) ENSGACT00000014424 Voltage-dependent R-type calcium channel subunit alpha-1E (Voltage- gated calcium channel subunit alpha Cav2.3) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (Brain calcium channel II) (BII). [Source:Uniprot/SWISSPROT;Acc:Q15878]
16.711 -16.16 0.0000176143 500 7 1 9 [+] picture button
MYO1C (2 of 2) ENSGACT00000026967 Myosin-Ic (Myosin I beta) (MMI-beta) (MMIb). [Source:Uniprot/SWISSPROT;Acc:O00159]
16.2966 -22.32 0.0000211882 330 6 1 9 [+] picture button
PPAP2A (1 of 2) ENSGACT00000021525 Lipid phosphate phosphohydrolase 1 (EC 3.1.3.4) (Phosphatidic acid phosphatase 2a) (Phosphatidate phosphohydrolase type 2a) (PAP2a) (PAP- 2a) (PAP2-alpha). [Source:Uniprot/SWISSPROT;Acc:O14494]
16.5774 -27.23 0.0000218499 500 6 8 8 [+] picture button
SUPT6H ENSGACT00000027174 Transcription elongation factor SPT6 (hSPT6) (Tat-cotransactivator 2 protein) (Tat-CT2 protein). [Source:Uniprot/SWISSPROT;Acc:Q7KZ85]
16.27 -14.77 0.000023578 500 3 2 7 [+] picture button
STK35 (1 of 2) ENSGACT00000004746 Serine/threonine-protein kinase 35 (EC 2.7.11.1) (CLP-36-interacting kinase) (Clik1) (PDLIM1-interacting kinase 1). [Source:Uniprot/SWISSPROT;Acc:Q8TDR2]
17.283 -21.56 0.0000262342 500 3 1 2 [+] picture button
CRABP2 (2 of 2) ENSGACT00000004331 Cellular retinoic acid-binding protein 2 (Cellular retinoic acid- binding protein II) (CRABP-II) (Retinoic acid-binding protein II, cellular). [Source:Uniprot/SWISSPROT;Acc:P29373]
16.1496 -16.3 0.0000262747 500 7 1 6 [+] picture button
HSD11B2 ENSGACT00000023182 Corticosteroid 11-beta-dehydrogenase isozyme 2 (EC 1.1.1.-) (11-DH2) (11-beta-hydroxysteroid dehydrogenase type 2) (11-beta-HSD2) (NAD- dependent 11-beta-hydroxysteroid dehydrogenase). [Source:Uniprot/SWISSPROT;Acc:P80365]
17.0052 -21.43 0.0000265743 500 4 2 7 [+] picture button
ENSGACT00000000853 CG11323-PA [Source:RefSeq_peptide;Acc:NP_609069]CG11323-PA [Source:RefSeq_peptide;Acc:NP_609069] BY ORTHOLOGY TO:CG11323-RA
16.3825 -17.29 0.0000273089 594 2 2 2 [+] picture button
ZNF423 ENSGACT00000003456 zinc finger protein 423 [Source:RefSeq_peptide;Acc:NP_055884]
16.581 -21.12 0.0000296368 500 5 1 8 [+] picture button
GRB10 (1 of 2) ENSGACT00000008534 Growth factor receptor-bound protein 10 (GRB10 adaptor protein) (Insulin receptor-binding protein GRB-IR). [Source:Uniprot/SWISSPROT;Acc:Q13322]
16.5774 -13.07 0.0000330606 500 5 2 6 [+] picture button
SF3A1 ENSGACT00000015779 Splicing factor 3 subunit 1 (Spliceosome-associated protein 114) (SAP 114) (SF3a120). [Source:Uniprot/SWISSPROT;Acc:Q15459]
16.9697 -14.19 0.0000350575 244 2 1 5 [+] picture button
ENSGACT00000013725 Homolog of Homo sapiens "Sodium-and chloride-activated ATP-sensitive potassium channel [Source:IPI;Acc:IPI00398421]"Homolog of Homo sapiens "Sodium-and chloride-activated ATP-sensitive potassium channel [Source:IPI;Acc:IPI00398421]" BY ORTHOLOGY TO:SINFRUT00000168818
17.9935 -16.48 0.0000360096 500 6 2 7 [+] picture button
PDCD4 ENSGACT00000024770 Programmed cell death protein 4 (Nuclear antigen H731-like) (Neoplastic transformation inhibitor protein) (Protein 197/15a). [Source:Uniprot/SWISSPROT;Acc:Q53EL6]
18.0867 -16.7 0.0000363475 572 5 3 7 [+] picture button

Page 1 of 17
1 2 3 4 5 6 7 8 9 10 11 .. 17 next >>

Download table: GFF TXT
spacer
spacer