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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and dre-miR-145

928 hits found.


Page 1 of 19
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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ENSGACT00000008730 Friend leukemia integration 1 transcription factor (Fli-1 proto- oncogene) (ERGB transcription factor). [Source:Uniprot/SWISSPROT;Acc:Q01543]Friend leukemia integration 1 transcription factor (Fli-1 proto- oncogene) (ERGB transcription factor). [Source:Uniprot/SWISSPROT;Acc:Q01543] BY ORTHOLOGY TO:ENSXETT00000049289
16.3661 -12.77 8.70957e-09 500 7 4 7 [+] picture button
P25A_HUMAN ENSGACT00000011381 Tubulin polymerization-promoting protein (TPPP) (25 kDa brain-specific protein) (p25-alpha) (p24) (p25). [Source:Uniprot/SWISSPROT;Acc:O94811]
17.2449 -16.75 1.4591e-08 500 9 9 14 [+] picture button
CSTF3 ENSGACT00000021152 Cleavage stimulation factor 77 kDa subunit (CSTF 77 kDa subunit) (CF-1 77 kDa subunit) (CstF-77). [Source:Uniprot/SWISSPROT;Acc:Q12996]
16.4108 -11.41 1.53121e-07 381 8 10 9 [+] picture button
B4GALT1 ENSGACT00000021586 Beta-1,4-galactosyltransferase 1 (EC 2.4.1.-) (Beta-1,4-GalTase 1) (Beta4Gal-T1) (b4Gal-T1) (UDP-galactose:beta-N-acetylglucosamine beta- 1,4-galactosyltransferase 1) (UDP-Gal:beta-GlcNAc beta-1,4- galactosyltransferase 1) [Includes: Lactose synthase A pr [Source:Uniprot/SWISSPROT;Acc:P15291]
16.4416 -12.48 7.62384e-07 500 4 1 4 [+] picture button
ENSGACT00000003853 Homolog of Brachydanio rerio "Novel potassium channel tetramerisation domain protein. [Source:Uniprot/SPTREMBL;Acc:Q5SNS9]"Homolog of Brachydanio rerio "Novel potassium channel tetramerisation domain protein. [Source:Uniprot/SPTREMBL;Acc:Q5SNS9]" BY ORTHOLOGY TO:SINFRUT00000144754
16.1192 -20.39 3.2717e-06 500 4 1 4 [+] picture button
SLC24A4 ENSGACT00000011181 Sodium/potassium/calcium exchanger 4 precursor (Na(+)/K(+)/Ca(2+)- exchange protein 4) (Solute carrier family 24 member 4). [Source:Uniprot/SWISSPROT;Acc:Q8NFF2]
17.1124 -16.44 3.31685e-06 500 5 4 7 [+] picture button
PEX11G ENSGACT00000011182 Peroxisomal membrane protein 11C (Peroxin-11C) (Peroxisomal biogenesis factor 11C) (PEX11gamma) (Pex11pgamma). [Source:Uniprot/SWISSPROT;Acc:Q96HA9]
15.6939 -14.03 6.88274e-06 439 8 2 10 [+] picture button
ROM1 (2 of 2) ENSGACT00000022381 Rod outer segment membrane protein 1 (ROSP1) (Tetraspanin-23) (Tspan- 23). [Source:Uniprot/SWISSPROT;Acc:Q03395]
17.2084 -19.97 8.60891e-06 426 5 1 6 [+] picture button
ENSGACT00000011895 Membrane-bound O-acyltransferase domain-containing protein 2 (EC 2.3.-.-) (O-acyltransferase domain-containing protein 2). [Source:Uniprot/SWISSPROT;Acc:Q6ZWT7]Membrane-bound O-acyltransferase domain-containing protein 2 (EC 2.3.-.-) (O-acyltransferase domain-containing protein 2). [Source:Uniprot/SWISSPROT;Acc:Q6ZWT7] BY ORTHOLOGY TO:ENSXETT00000018137
16.1152 -20.53 8.7848e-06 500 4 3 4 [+] picture button
ELMO1 ENSGACT00000007749 Engulfment and cell motility protein 1 (CED-12 homolog). [Source:Uniprot/SWISSPROT;Acc:Q92556]
15.7305 -13.52 9.23232e-06 500 4 2 4 [+] picture button
THAP11 ENSGACT00000020997 THAP domain-containing protein 11. [Source:Uniprot/SWISSPROT;Acc:Q96EK4]
15.609 -13.29 1.1136e-05 500 4 1 5 [+] picture button
MAP4K2 ENSGACT00000001057 Mitogen-activated protein kinase kinase kinase kinase 2 (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 2) (MEK kinase kinase 2) (MEKKK 2) (Germinal center kinase) (GC kinase) (Rab8-interacting protein) (B lymphocyte serine/threonine-protein kinase). [Source:Uniprot/SWISSPROT;Acc:Q12851]
16.5491 -15.14 2.23409e-05 500 3 1 3 [+] picture button
SUPT7L ENSGACT00000017069 STAGA complex 65 subunit gamma (STAF65gamma) (SPTF-associated factor 65 gamma) (Suppressor of Ty 7-like) (Adenocarcinoma antigen ART1). [Source:Uniprot/SWISSPROT;Acc:O94864]
16.2596 -14.31 2.25478e-05 246 7 3 11 [+] picture button
PSMD2 ENSGACT00000000279 26S proteasome non-ATPase regulatory subunit 2 (26S proteasome regulatory subunit RPN1) (26S proteasome regulatory subunit S2) (26S proteasome subunit p97) (Tumor necrosis factor type 1 receptor- associated protein 2) (55.11 protein). [Source:Uniprot/SWISSPROT;Acc:Q13200]
16.567 -23.02 2.92932e-05 497 6 2 5 [+] picture button
C2orf17 ENSGACT00000020011 Uncharacterized protein C2orf17. [Source:Uniprot/SWISSPROT;Acc:Q8NC44]
16.6565 -17.02 3.0823e-05 500 4 3 5 [+] picture button
SOCS7 ENSGACT00000019551 Suppressor of cytokine signaling 7 (SOCS-7) (Nck, Ash and phospholipase C gamma-binding protein) (Nck-associated protein 4) (NAP-4). [Source:Uniprot/SWISSPROT;Acc:O14512]
16.5907 -22.96 3.22076e-05 433 6 1 6 [+] picture button
SHD (1 of 2) ENSGACT00000015285 SH2 domain-containing adapter protein D. [Source:Uniprot/SWISSPROT;Acc:Q96IW2]
17.0864 -22.02 3.65642e-05 500 4 2 4 [+] picture button
MYT1L (1 of 2) ENSGACT00000015854 Myelin transcription factor 1-like protein (MyT1L protein) (MyT1-L). [Source:Uniprot/SWISSPROT;Acc:Q9UL68]
15.9701 -18.74 3.87266e-05 500 6 9 14 [+] picture button
TYW3 ENSGACT00000019347 tRNA wybutosine-synthesizing protein 3 homolog (EC 2.1.1.-). [Source:Uniprot/SWISSPROT;Acc:Q6IPR3]
16.4416 -20.38 3.97888e-05 500 8 2 11 [+] picture button
ENSGACT00000022663 NOT ANNOTATED
16.7224 -14.98 4.22799e-05 500 5 2 5 [+] picture button
SIAH2 ENSGACT00000002417 E3 ubiquitin-protein ligase SIAH2 (EC 6.3.2.-) (Seven in absentia homolog 2) (Siah-2) (hSiah2). [Source:Uniprot/SWISSPROT;Acc:O43255]
15.842 -13.03 4.46842e-05 376 3 2 3 [+] picture button
PNPLA10P (2 of 3) ENSGACT00000025014 intracellular membrane-associated calcium-independent phospholipase A2 gamma [Source:RefSeq_peptide;Acc:NP_056538]
17.4088 -21.26 4.81678e-05 500 5 1 6 [+] picture button
BLOC1S2 ENSGACT00000001506 Biogenesis of lysosome-related organelles complex-1 subunit 2 (BLOC subunit 2) (Centrosome-associated protein). [Source:Uniprot/SWISSPROT;Acc:Q6QNY1]
16.3078 -11.25 5.6844e-05 500 3 1 5 [+] picture button
KNDC1 ENSGACT00000003765 kinase non-catalytic C-lobe domain (KIND) containing 1 isoform a [Source:RefSeq_peptide;Acc:NP_689856]
18.0535 -22.06 5.85709e-05 500 5 1 6 [+] picture button
SFRS11 (2 of 2) ENSGACT00000023638 Splicing factor arginine/serine-rich 11 (Arginine-rich 54 kDa nuclear protein) (p54). [Source:Uniprot/SWISSPROT;Acc:Q05519]
17.0328 -15.06 6.34326e-05 379 7 2 9 [+] picture button
NP_056263.1 ENSGACT00000024205 DPCD protein [Source:RefSeq_peptide;Acc:NP_056263]
16.3342 -22.18 6.8296e-05 500 4 2 4 [+] picture button
ENSGACT00000023122 NOT ANNOTATED
17.9933 -19.57 7.19711e-05 500 7 1 5 [+] picture button
HDAC3 ENSGACT00000024844 Histone deacetylase 3 (HD3) (RPD3-2) (SMAP45). [Source:Uniprot/SWISSPROT;Acc:O15379]
16.8723 -16.87 7.7249e-05 500 9 1 8 [+] picture button
MRC2 ENSGACT00000011981 Macrophage mannose receptor 2 precursor (Urokinase receptor-associated protein) (Endocytic receptor 180) (CD280 antigen). [Source:Uniprot/SWISSPROT;Acc:Q9UBG0]
15.6894 -16.4 8.60717e-05 500 2 2 5 [+] picture button
DLL4 (1 of 2) ENSGACT00000017121 Delta-like protein 4 precursor (Drosophila Delta homolog 4). [Source:Uniprot/SWISSPROT;Acc:Q9NR61]
15.7201 -21.56 8.76625e-05 500 5 2 5 [+] picture button
CLTA ENSGACT00000024649 Clathrin light chain A (Lca). [Source:Uniprot/SWISSPROT;Acc:P09496]
16.7278 -22.02 8.93288e-05 648 5 3 7 [+] picture button
ENSGACT00000014710 Homolog of Gallus gallus "Dynactin-1 (150 kDa dynein-associated polypeptide) (DP-150) (DAP-150) (p150-glued). [Source:Uniprot/SWISSPROT;Acc:P35458]"Homolog of Gallus gallus "Dynactin-1 (150 kDa dynein-associated polypeptide) (DP-150) (DAP-150) (p150-glued). [Source:Uniprot/SWISSPROT;Acc:P35458]" BY ORTHOLOGY TO:SINFRUT00000137245
16.3342 -18.39 9.13764e-05 500 5 1 7 [+] picture button
EPN3 (1 of 2) ENSGACT00000014086 Epsin-3 (EPS-15-interacting protein 3). [Source:Uniprot/SWISSPROT;Acc:Q9H201]
15.6124 -13.88 9.32994e-05 500 9 2 14 [+] picture button
FGF18 ENSGACT00000023719 Fibroblast growth factor 18 precursor (FGF-18) (zFGF5). [Source:Uniprot/SWISSPROT;Acc:O76093]
18.3759 -24.64 9.44345e-05 500 6 1 4 [+] picture button
FGF18 ENSGACT00000023722 Fibroblast growth factor 18 precursor (FGF-18) (zFGF5). [Source:Uniprot/SWISSPROT;Acc:O76093]
18.3759 -24.64 9.44345e-05 500 5 1 3 [+] picture button
SLC9A3R1 (1 of 2) ENSGACT00000017506 Ezrin-radixin-moesin-binding phosphoprotein 50 (EBP50) (Na(+)/H(+) exchange regulatory cofactor NHE-RF) (NHERF-1) (Regulatory cofactor of Na(+)/H(+) exchanger) (Sodium-hydrogen exchanger regulatory factor 1) (Solute carrier family 9 isoform 3 regulatory f [Source:Uniprot/SWISSPROT;Acc:O14745]
17.3491 -19.08 0.000114411 500 6 2 8 [+] picture button
ARHGAP26 ENSGACT00000027454 Rho GTPase-activating protein 26 (Oligophrenin-1-like protein) (GTPase regulator associated with focal adhesion kinase). [Source:Uniprot/SWISSPROT;Acc:Q9UNA1]
17.3013 -20.94 0.000116115 500 8 3 12 [+] picture button
PNKP ENSGACT00000007848 Bifunctional polynucleotide phosphatase/kinase (Polynucleotide kinase- 3'-phosphatase) (DNA 5'-kinase/3'-phosphatase) [Includes: Polynucleotide 3'-phosphatase (EC 3.1.3.32) (2'(3')-polynucleotidase); Polynucleotide 5'-hydroxyl-kinase (EC 2.7.1.78)]. [Source:Uniprot/SWISSPROT;Acc:Q96T60]
17.624 -17.68 0.000121091 203 4 3 4 [+] picture button
SARS2 ENSGACT00000007707 Seryl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.11) (Serine-- tRNA ligase) (SerRSmt). [Source:Uniprot/SWISSPROT;Acc:Q9NP81]
16.6281 -16.85 0.000126037 314 7 2 7 [+] picture button
CCDC4 ENSGACT00000023204 Coiled-coil domain-containing protein 4. [Source:Uniprot/SWISSPROT;Acc:Q6ZU67]
16.6542 -22.73 0.000128862 500 3 1 4 [+] picture button
CHM ENSGACT00000027699 Rab proteins geranylgeranyltransferase component A 1 (Rab escort protein 1) (REP-1) (Choroideraemia protein) (TCD protein). [Source:Uniprot/SWISSPROT;Acc:P24386]
16.9789 -29.23 0.000156555 500 5 1 5 [+] picture button
ENSGACT00000012928 zinc finger protein 143 [Source:RefSeq_peptide;Acc:NP_957273]zinc finger protein 143 [Source:RefSeq_peptide;Acc:NP_957273] BY ORTHOLOGY TO:ENSDART00000038813
17.1425 -20.51 0.000172072 500 4 3 7 [+] picture button
ENSGACT00000002999 Homolog of Danio rerio "Similar to programmed cell death 6 [Source:IPI;Acc:IPI00490490]"Homolog of Danio rerio "Similar to programmed cell death 6 [Source:IPI;Acc:IPI00490490]" BY ORTHOLOGY TO:SINFRUT00000131090
15.658 -13.69 0.000172532 654 6 3 10 [+] picture button
KIAA1411 ENSGACT00000007831 KIAA1411 (KIAA1411), mRNA [Source:RefSeq_dna;Acc:NM_020819]
15.8427 -14.3 0.000177688 500 4 4 7 [+] picture button
SPATA18 ENSGACT00000018802 Spermatogenesis-associated protein 18. [Source:Uniprot/SWISSPROT;Acc:Q8TC71]
16.5153 -23.88 0.000185806 500 4 1 6 [+] picture button
DLL4 (2 of 2) ENSGACT00000007822 Delta-like protein 4 precursor (Drosophila Delta homolog 4). [Source:Uniprot/SWISSPROT;Acc:Q9NR61]
16.0396 -17.14 0.000219475 500 5 4 8 [+] picture button
C17orf61 ENSGACT00000026392 Uncharacterized protein C17orf61. [Source:Uniprot/SPTREMBL;Acc:Q8N2U0]
16.8456 -19.66 0.000220415 410 2 4 2 [+] picture button
DIS3L ENSGACT00000022910 DIS3 mitotic control homolog (S. cerevisiae)-like [Source:RefSeq_peptide;Acc:NP_588616]
17.624 -14.08 0.00022668 130 4 4 6 [+] picture button
PPP4R2 (1 of 2) ENSGACT00000015610 protein phosphatase 4, regulatory subunit 2 [Source:RefSeq_peptide;Acc:NP_777567]
15.6894 -13.52 0.000233166 500 7 2 10 [+] picture button
RMI1 ENSGACT00000010125 Protein RMI1 homolog (75 kDa BLM-associated protein) (BLAP75) (FAAP75). [Source:Uniprot/SWISSPROT;Acc:Q9H9A7]
17.7376 -18.9 0.000238609 500 8 2 10 [+] picture button

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Download table: GFF TXT
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