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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and xtr-miR-33b

786 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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glra1 ENSDART00000047680 Glycine receptor subunit alphaZ1 precursor. [Source:Uniprot/SWISSPROT;Acc:O93430]
20.5823 -22.45 2.15866e-08 201 3 8 8 [+] picture button
zgc:110643 ENSDART00000018235 hypothetical protein LOC553204 [Source:RefSeq_peptide;Acc:NP_001018161]
16.4182 -18.68 3.08361e-08 1295 2 2 2 [+] picture button
LOC797196 ENSDART00000062594 DnaJ homolog subfamily C member 12 (J domain-containing protein 1). [Source:Uniprot/SWISSPROT;Acc:Q9UKB3]DnaJ homolog subfamily C member 12 (J domain-containing protein 1). [Source:Uniprot/SWISSPROT;Acc:Q9UKB3] BY ORTHOLOGY TO:ENSORLT00000017134
17.2229 -16.92 3.47098e-06 700 5 1 5 [+] picture button
XR_029889.1 ENSDART00000074819 similar to gamma-aminobutyric acid (GABA) A receptor, pi (LOC566633), mRNA [Source:RefSeq_dna;Acc:XR_029889]
16.4971 -16.26 4.89009e-06 700 5 1 7 [+] picture button
zgc:55448 ENSDART00000059438 hypothetical protein LOC326100 [Source:RefSeq_peptide;Acc:NP_956036]
16.6596 -13.48 5.04837e-06 700 6 1 8 [+] picture button
LOC569146 ENSDART00000083591 ATP-sensitive inward rectifier potassium channel 12 (Potassium channel, inwardly rectifying subfamily J member 12) (Inward rectifier K(+) channel Kir2.2) (Kir2.2v) (IRK2). [Source:Uniprot/SWISSPROT;Acc:Q14500]ATP-sensitive inward rectifier potassium channel 12 (Potassium channel, inwardly rectifying subfamily J member 12) (Inward rectifier K(+) channel Kir2.2) (Kir2.2v) (IRK2). [Source:Uniprot/SWISSPROT;Acc:Q14500] BY ORTHOLOGY TO:ENSGACT00000011312
17.9032 -19.69 5.74349e-06 700 5 5 6 [+] picture button
cacna1d ENSDART00000089956 calcium channel, voltage-dependent, L type, alpha 1D subunit [Source:RefSeq_peptide;Acc:NP_982351]
16.8501 -15.36 1.02912e-05 700 9 5 12 [+] picture button
zgc:110055 ENSDART00000050831 hypothetical protein LOC557614 [Source:RefSeq_peptide;Acc:NP_001025128]
16.3268 -14.17 1.15026e-05 1029 5 1 5 [+] picture button
LOC569664 ENSDART00000085676 calsyntenin 2 (Clstn2), mRNA [Source:RefSeq_dna;Acc:NM_134377]calsyntenin 2 (Clstn2), mRNA [Source:RefSeq_dna;Acc:NM_134377] BY ORTHOLOGY TO:ENSRNOT00000036963
16.4763 -11.6 1.24026e-05 700 5 1 8 [+] picture button
rsu1 ENSDART00000066593 Rsu1 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5U3F0]
16.7447 -8.99 2.40708e-05 700 4 1 5 [+] picture button
zgc:110621 ENSDART00000039165 hypothetical protein LOC554088 [Source:RefSeq_peptide;Acc:NP_001019561]
18.4762 -18.06 2.98852e-05 380 12 7 27 [+] picture button
COL25A1 ENSDART00000074352 Collagen alpha-1(XXV) chain (CLAC-P) (Alzheimer disease amyloid- associated protein) (AMY) [Contains: Collagen-like Alzheimer amyloid plaque component (CLAC)]. [Source:Uniprot/SWISSPROT;Acc:Q9BXS0]
17.3323 -15.49 3.53244e-05 700 8 1 8 [+] picture button
zgc:113625 ENSDART00000076314 zgc:113625 (zgc:113625), mRNA [Source:RefSeq_dna;Acc:NM_001013481]
17.3513 -13.79 3.58444e-05 700 4 1 3 [+] picture button
opn1sw1 ENSDART00000067160 Opsin-1, short-wave-sensitive 1 (Ultraviolet-sensitive opsin) (Ultraviolet cone photoreceptor pigment) (Opsin SWS-1). [Source:Uniprot/SWISSPROT;Acc:Q9W6A9]
16.833 -17.44 4.4188e-05 689 5 1 7 [+] picture button
fn3krp ENSDART00000033538 fructosamine-3-kinase-related protein [Source:RefSeq_peptide;Acc:NP_001006089]
16.3795 -10.98 4.57678e-05 368 11 2 13 [+] picture button
zgc:112153 ENSDART00000045882 hypothetical protein LOC553681 [Source:RefSeq_peptide;Acc:NP_001018490]
16.7665 -15.6 5.08163e-05 216 6 2 14 [+] picture button
zgc:110677 ENSDART00000002741 hypothetical protein LOC550570 [Source:RefSeq_peptide;Acc:NP_001017872]
18.0384 -15.1 5.16135e-05 193 7 3 14 [+] picture button
ENSDART00000085774 Neurotrypsin precursor (EC 3.4.21.-) (Serine protease 12) (Motopsin) (Leydin). [Source:Uniprot/SWISSPROT;Acc:P56730]Neurotrypsin precursor (EC 3.4.21.-) (Serine protease 12) (Motopsin) (Leydin). [Source:Uniprot/SWISSPROT;Acc:P56730] BY ORTHOLOGY TO:ENSORLT00000013426
17.3836 -16.8 5.20791e-05 700 7 1 7 [+] picture button
LOC564392 ENSDART00000002751 ZK856.5 [Source:RefSeq_peptide;Acc:NP_505620]ZK856.5 [Source:RefSeq_peptide;Acc:NP_505620] BY ORTHOLOGY TO:ZK856.5
16.4288 -11.9 5.68256e-05 700 3 3 3 [+] picture button
LOC568394 ENSDART00000076393 Ral GEF with PH domain and SH3 binding motif 1 [Source:MarkerSymbol;Acc:MGI:1922008]Ral GEF with PH domain and SH3 binding motif 1 [Source:MarkerSymbol;Acc:MGI:1922008] BY ORTHOLOGY TO:ENSMUST00000091039
16.8145 -16.99 5.8526e-05 700 8 1 11 [+] picture button
zgc:63976 ENSDART00000009194 hypothetical protein LOC406647 [Source:RefSeq_peptide;Acc:NP_998503]
17.2227 -13.34 5.99176e-05 360 8 2 16 [+] picture button
A2CER7_DANRE ENSDART00000051392 Novel protein similar to human spinster protein (SPIN1). [Source:Uniprot/SPTREMBL;Acc:A2CER7]
17.137 -15.61 6.08408e-05 700 6 4 5 [+] picture button
LOC100002893 ENSDART00000034619 solute carrier family 39 (zinc transporter), member 8 [Source:RefSeq_peptide;Acc:NP_071437]solute carrier family 39 (zinc transporter), member 8 [Source:RefSeq_peptide;Acc:NP_071437] BY ORTHOLOGY TO:SINFRUT00000155823
17.0814 -15.07 6.98027e-05 700 4 1 4 [+] picture button
LOC570656 ENSDART00000079645 Homolog of Homo sapiens "Splice Isoform 2 of ADAM 9 precursor [Source:IPI;Acc:IPI00440933]"Homolog of Homo sapiens "Splice Isoform 2 of ADAM 9 precursor [Source:IPI;Acc:IPI00440933]" BY ORTHOLOGY TO:SINFRUT00000160811
17.2713 -17.66 7.06787e-05 700 5 1 6 [+] picture button
dpy19l1l ENSDART00000102331 dpy-19-like 1, like [Source:RefSeq_peptide;Acc:NP_001002868]
16.3786 -15.67 7.87279e-05 700 7 1 10 [+] picture button
NP_001014817.1 ENSDART00000056245 terminal deoxynucleotidyl transferase [Source:RefSeq_peptide;Acc:NP_001014817]
16.9255 -14.83 8.02283e-05 700 5 1 6 [+] picture button
zgc:92849 ENSDART00000017180 hypothetical protein LOC436767 [Source:RefSeq_peptide;Acc:NP_001002494]
17.3515 -15.69 8.27788e-05 623 6 1 8 [+] picture button
WDR61 ENSDART00000080340 WD repeat protein 61 (Meiotic recombination REC14 protein homolog). [Source:Uniprot/SWISSPROT;Acc:Q9GZS3]
17.0892 -16.26 8.52286e-05 700 2 1 2 [+] picture button
LOC560602 ENSDART00000081657 Solute carrier family 2, facilitated glucose transporter member 6 (Glucose transporter type 6) (Glucose transporter type 9). [Source:Uniprot/SWISSPROT;Acc:Q9UGQ3]Solute carrier family 2, facilitated glucose transporter member 6 (Glucose transporter type 6) (Glucose transporter type 9). [Source:Uniprot/SWISSPROT;Acc:Q9UGQ3] BY ORTHOLOGY TO:ENSORLT00000016156
17.8194 -20.5 8.67614e-05 700 9 1 10 [+] picture button
zgc:113625 ENSDART00000076316 zgc:113625 (zgc:113625), mRNA [Source:RefSeq_dna;Acc:NM_001013481]
16.5139 -13.79 9.04068e-05 1143 5 1 3 [+] picture button
zgc:123198 ENSDART00000005784 hypothetical protein LOC641420 [Source:RefSeq_peptide;Acc:NP_001032486]
17.2888 -12.93 9.4615e-05 490 8 3 12 [+] picture button
wdr1 ENSDART00000098900 WD repeat domain 1 [Source:RefSeq_peptide;Acc:NP_957333]
16.9977 -13.7 0.000112084 700 8 2 14 [+] picture button
zgc:92432 ENSDART00000061164 hypothetical protein LOC431722 [Source:RefSeq_peptide;Acc:NP_001002175]
16.3699 -14.07 0.00014693 418 9 5 12 [+] picture button
LOC563927 ENSDART00000041725 Scm-like with four mbt domains 1 [Source:MarkerSymbol;Acc:MGI:1859609]Scm-like with four mbt domains 1 [Source:MarkerSymbol;Acc:MGI:1859609] BY ORTHOLOGY TO:ENSMUST00000060778
17.0607 -15.99 0.00015003 700 10 2 8 [+] picture button
cdc123 ENSDART00000067335 Cell division cycle protein 123 homolog. [Source:Uniprot/SWISSPROT;Acc:Q6PC40]
17.1323 -13.71 0.000153192 315 8 3 19 [+] picture button
zgc:55634 ENSDART00000005127 Protein FAM59A. [Source:Uniprot/SWISSPROT;Acc:Q7ZVU1]
16.3434 -16.48 0.000157394 353 6 2 9 [+] picture button
zgc:110044 ENSDART00000054707 zgc:110044 (zgc:110044), mRNA [Source:RefSeq_dna;Acc:NM_001020560]
17.2713 -19.15 0.000168317 700 8 2 9 [+] picture button
LOC558783 ENSDART00000087201 Cell death activator CIDE-A (Cell death-inducing DFFA-like effector A). [Source:Uniprot/SWISSPROT;Acc:O60543]Cell death activator CIDE-A (Cell death-inducing DFFA-like effector A). [Source:Uniprot/SWISSPROT;Acc:O60543] BY ORTHOLOGY TO:ENSMODT00000027252
16.9554 -16.51 0.000179619 700 8 1 9 [+] picture button
zgc:55803 ENSDART00000104420 hypothetical protein LOC393111 [Source:RefSeq_peptide;Acc:NP_956436]
18.8478 -18.11 0.000196865 269 6 2 11 [+] picture button
A3KPR2_DANRE ENSDART00000098291 Novel protein similar to human family with sequence similarity 19 (Chemokine (C-C motif)-like), member A5 (FAM19A5) (Fragment). [Source:Uniprot/SPTREMBL;Acc:A3KPR2]
16.8501 -18.03 0.000199466 700 5 1 5 [+] picture button
dkfzp564o0523 ENSDART00000049147 hypothetical protein LOC402897 [Source:RefSeq_peptide;Acc:NP_991167]
16.2182 -10.72 0.000228384 700 8 2 10 [+] picture button
CCDC78 ENSDART00000042273 coiled-coil domain containing 78 isoform 1 [Source:RefSeq_peptide;Acc:NP_001026907]
16.3608 -14.67 0.000233294 700 6 1 5 [+] picture button
xbp1 ENSDART00000051649 X-box binding protein 1 (xbp1), mRNA [Source:RefSeq_dna;Acc:NM_131874]
16.7906 -12.86 0.00023815 376 7 2 9 [+] picture button
FCHO1 ENSDART00000029175 FCH domain only protein 1. [Source:Uniprot/SWISSPROT;Acc:O14526]
16.7447 -12.34 0.00023932 700 6 3 6 [+] picture button
zgc:162582 ENSDART00000102181 hypothetical protein LOC100037329 [Source:RefSeq_peptide;Acc:NP_001082953]
16.6959 -15.37 0.000243471 1147 2 1 3 [+] picture button
c13orf22l ENSDART00000043802 hypothetical protein LOC445403 [Source:RefSeq_peptide;Acc:NP_001003880]
18.6165 -14.97 0.000247175 280 12 2 21 [+] picture button
PDZD4 ENSDART00000084525 PDZ domain-containing protein 4 (PDZ domain-containing RING finger protein 4-like protein). [Source:Uniprot/SWISSPROT;Acc:Q76G19]
16.7447 -16.02 0.000279263 700 6 1 8 [+] picture button
si:ch211-170d11.3 ENSDART00000091742 Novel protein similar to veretbrate BTB (POZ) domain containing 11 (BTBD11). [Source:Uniprot/SPTREMBL;Acc:Q1LWC4]
18.2191 -25.02 0.000285211 700 3 1 4 [+] picture button
zgc:56683 ENSDART00000065338 p21-activated protein kinase-interacting protein 1-like (PAK1- interacting protein 1-like). [Source:Uniprot/SWISSPROT;Acc:Q6TNS2]
16.8223 -16.69 0.000288204 700 6 1 7 [+] picture button
si:busm1-142b24.1 ENSDART00000062430 hypothetical protein LOC368727 [Source:RefSeq_peptide;Acc:NP_001006662]
16.7856 -10.16 0.00029504 700 6 2 9 [+] picture button

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Download table: GFF TXT
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