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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-99

812 hits found.


Page 1 of 17
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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hs3st2 ENSDART00000083040 heparan sulfate (glucosamine) 3-O-sulfotransferase 2 [Source:RefSeq_peptide;Acc:NP_001074077]
14.8485 -14.62 1.39874e-06 700 4 2 5 [+] picture button
Q1ECV0_DANRE ENSDART00000017596 Hypothetical protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1ECV0]
16.6696 -18.94 1.11352e-05 700 6 1 7 [+] picture button
hsp90b1 ENSDART00000004879 tumor rejection antigen (gp96) 1 [Source:RefSeq_peptide;Acc:NP_937853]
14.7814 -10.87 1.89554e-05 255 6 6 13 [+] picture button
zgc:63668 ENSDART00000043565 hypothetical protein LOC393415 [Source:RefSeq_peptide;Acc:NP_956737]
14.5523 -12.66 2.46251e-05 700 8 2 9 [+] picture button
Q0P4B1_DANRE ENSDART00000084081 Hypothetical protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q0P4B1]
14.9345 -15.49 3.03556e-05 700 6 2 10 [+] picture button
ndpkz3 ENSDART00000080666 nucleoside diphosphate kinase-Z3 [Source:RefSeq_peptide;Acc:NP_571003]
14.3693 -15.22 3.26251e-05 521 7 3 9 [+] picture button
zgc:152990 ENSDART00000086047 hypothetical protein LOC558346 [Source:RefSeq_peptide;Acc:NP_001071014]
15.16 -17.22 4.25743e-05 700 8 2 11 [+] picture button
rrm2b ENSDART00000050750 ribonucleotide reductase M2 b [Source:RefSeq_peptide;Acc:NP_001007164]
14.1717 -15.53 5.3964e-05 478 8 2 14 [+] picture button
si:ch211-234g24.3 ENSDART00000086530 Novel protein similar to vertebrate SH3KBP1 binding protein 1 (SHKBP1) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1L992]
15.0073 -22.48 6.51201e-05 700 8 2 8 [+] picture button
zfpm1 ENSDART00000060949 Zinc finger protein FOG1 (Friend of Gata1) (Zinc finger protein multitype 1) (Fragment). [Source:Uniprot/SWISSPROT;Acc:P60622]
14.7814 -13.94 6.73789e-05 254 6 4 13 [+] picture button
FNDC7 ENSDART00000067387 fibronectin type III domain containing 7 [Source:RefSeq_peptide;Acc:NP_775803]
16.487 -18.19 7.08149e-05 700 6 2 15 [+] picture button
zgc:56608 ENSDART00000058546 hypothetical protein LOC394069 [Source:RefSeq_peptide;Acc:NP_957388]
15.321 -16.12 7.09642e-05 458 10 1 17 [+] picture button
fntb ENSDART00000038149 farnesyltransferase, CAAX box, beta [Source:RefSeq_peptide;Acc:NP_001002128]
16.395 -16.35 7.17258e-05 335 8 3 15 [+] picture button
tomm34 ENSDART00000001803 translocase of outer mitochondrial membrane 34 [Source:RefSeq_peptide;Acc:NP_955932]
14.1059 -11.28 8.6039e-05 623 6 2 9 [+] picture button
LOC558321 ENSDART00000091370 Mitogen-activated protein kinase kinase kinase 2 (EC 2.7.11.25) (MAPK/ERK kinase kinase 2) (MEK kinase 2) (MEKK 2). [Source:Uniprot/SWISSPROT;Acc:Q9Y2U5]Mitogen-activated protein kinase kinase kinase 2 (EC 2.7.11.25) (MAPK/ERK kinase kinase 2) (MEK kinase 2) (MEKK 2). [Source:Uniprot/SWISSPROT;Acc:Q9Y2U5] BY ORTHOLOGY TO:SINFRUT00000141140
15.1829 -21.39 0.000118021 700 10 4 16 [+] picture button
LOC559804 ENSDART00000035713 NOT ANNOTATED
16.6388 -16.94 0.000121159 700 7 1 7 [+] picture button
cdx4 ENSDART00000052709 caudal type homeo box transcription factor 4 [Source:RefSeq_peptide;Acc:NP_571184]
15.6576 -15.39 0.000150133 504 11 3 14 [+] picture button
zgc:153457 ENSDART00000049646 hypothetical protein LOC768286 [Source:RefSeq_peptide;Acc:NP_001070919]
15.1225 -11.3 0.000150408 175 6 2 12 [+] picture button
A2BFP5_DANRE ENSDART00000084917 Novel protein to vertebrate solute carrier family 12 (Potassium/chloride transporters), member 9 (SLC12A9). [Source:Uniprot/SPTREMBL;Acc:A2BFP5]
15.2456 -13.33 0.000162742 700 5 1 6 [+] picture button
zmat2 ENSDART00000007412 zinc finger, matrin type 2 [Source:RefSeq_peptide;Acc:NP_997846]
15.6683 -16.5 0.00017769 501 8 2 11 [+] picture button
KIAA1432 ENSDART00000082377 KIAA1432 (KIAA1432), mRNA [Source:RefSeq_dna;Acc:NM_020829]
16.4901 -28.79 0.000197418 700 7 1 8 [+] picture button
fzd8a ENSDART00000066835 frizzled homolog 8a [Source:RefSeq_peptide;Acc:NP_571629]
15.8263 -13.28 0.000200024 700 9 2 10 [+] picture button
cfl1 ENSDART00000006132 cofilin 2, like [Source:RefSeq_peptide;Acc:NP_998806]
14.7073 -21.77 0.000205655 828 4 2 6 [+] picture button
zgc:153977 ENSDART00000082927 hypothetical protein LOC768185 [Source:RefSeq_peptide;Acc:NP_001070796]
14.7413 -12.73 0.000211756 670 6 1 8 [+] picture button
VIT ENSDART00000093160 Vitrin precursor. [Source:Uniprot/SWISSPROT;Acc:Q6UXI7]
14.8823 -14.11 0.000222345 700 2 2 3 [+] picture button
rx3 ENSDART00000074833 Retinal homeobox protein Rx3. [Source:Uniprot/SWISSPROT;Acc:O42358]
14.1421 -15.13 0.000226403 416 7 2 14 [+] picture button
pop5 ENSDART00000075491 Ribonuclease P/MRP protein subunit POP5 (EC 3.1.26.5). [Source:Uniprot/SWISSPROT;Acc:Q5BJI6]
15.2416 -12.64 0.000273612 350 10 1 21 [+] picture button
tspan15 ENSDART00000057641 tetraspanin 15 [Source:RefSeq_peptide;Acc:NP_001017773]
14.6088 -14.94 0.000279251 700 11 5 13 [+] picture button
LOC798703 ENSDART00000060098 Gem-associated protein 7 (Gemin-7) (SIP3). [Source:Uniprot/SWISSPROT;Acc:Q9H840]Gem-associated protein 7 (Gemin-7) (SIP3). [Source:Uniprot/SWISSPROT;Acc:Q9H840] BY ORTHOLOGY TO:ENSMMUT00000032273
14.4403 -16.69 0.000307577 143 5 2 8 [+] picture button
zgc:110044 ENSDART00000054707 zgc:110044 (zgc:110044), mRNA [Source:RefSeq_dna;Acc:NM_001020560]
15.6605 -17.72 0.000319894 700 8 2 9 [+] picture button
uap1 ENSDART00000073970 UDP-N-acteylglucosamine pyrophosphorylase 1 [Source:RefSeq_peptide;Acc:NP_997786]
14.4727 -21.38 0.000322171 637 7 3 11 [+] picture button
sox9a ENSDART00000005676 SRY-box containing gene 9a [Source:RefSeq_peptide;Acc:NP_571718]
16.0322 -15.03 0.00032883 235 7 2 15 [+] picture button
LOC557046 ENSDART00000024499 Sulfate transporter (Diastrophic dysplasia protein homolog) (Solute carrier family 26 member 2). [Source:Uniprot/SWISSPROT;Acc:O70531]Sulfate transporter (Diastrophic dysplasia protein homolog) (Solute carrier family 26 member 2). [Source:Uniprot/SWISSPROT;Acc:O70531] BY ORTHOLOGY TO:ENSRNOT00000024374
16.4004 -16.06 0.000338463 700 7 1 8 [+] picture button
Q58EH0_DANRE ENSDART00000098860 LOC553344 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q58EH0]
14.8308 -14.58 0.00036985 700 5 1 6 [+] picture button
cse1l ENSDART00000013203 Exportin-2 (Exp2) (Importin-alpha re-exporter) (Chromosome segregation 1-like protein). [Source:Uniprot/SWISSPROT;Acc:Q7SZC2]
14.363 -22.13 0.000378562 559 8 1 11 [+] picture button
zgc:86924 ENSDART00000039667 hypothetical protein LOC415180 [Source:RefSeq_peptide;Acc:NP_001002090]
15.2094 -21.1 0.000380771 700 5 1 11 [+] picture button
ccng1 ENSDART00000033596 cyclin G1 [Source:RefSeq_peptide;Acc:NP_955775]
15.3754 -16.68 0.000383594 869 7 1 6 [+] picture button
zgc:85821 ENSDART00000051003 hypothetical protein LOC405897 [Source:RefSeq_peptide;Acc:NP_998126]
14.4403 -11.46 0.000389919 146 4 2 12 [+] picture button
XR_029166.1 ENSDART00000058789 hypothetical LOC566323 (LOC566323), mRNA [Source:RefSeq_dna;Acc:XR_029166]
14.9772 -14.38 0.000396658 700 7 2 8 [+] picture button
LOC569664 ENSDART00000085676 calsyntenin 2 (Clstn2), mRNA [Source:RefSeq_dna;Acc:NM_134377]calsyntenin 2 (Clstn2), mRNA [Source:RefSeq_dna;Acc:NM_134377] BY ORTHOLOGY TO:ENSRNOT00000036963
14.3394 -15.84 0.000403225 700 5 1 8 [+] picture button
phf16 ENSDART00000023163 Protein Jade-3 (PHD finger protein 16). [Source:Uniprot/SWISSPROT;Acc:Q7ZVP1]
15.4617 -15.94 0.000403654 451 11 2 16 [+] picture button
C17orf56 ENSDART00000105533 Uncharacterized protein C17orf56. [Source:Uniprot/SPTREMBL;Acc:Q96N21]
15.6791 -18.5 0.000406213 700 5 1 7 [+] picture button
LOC568361 ENSDART00000079232 LR11 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9R0N2]LR11 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9R0N2] BY ORTHOLOGY TO:ENSRNOT00000059974
15.1498 -15.32 0.00041018 700 7 1 10 [+] picture button
A2AVI6_DANRE ENSDART00000101038 Novel protein similar to human and mouse transmembrane inner ear (TMIE). [Source:Uniprot/SPTREMBL;Acc:A2AVI6]
14.3122 -20.16 0.000433657 700 2 1 3 [+] picture button
hdac3 ENSDART00000054626 Histone deacetylase 3 (HD3). [Source:Uniprot/SWISSPROT;Acc:Q803C3]
14.2654 -19.17 0.000439143 636 7 2 7 [+] picture button
epdr1 ENSDART00000066788 ependymin related protein 1 [Source:RefSeq_peptide;Acc:NP_001002416]
14.5701 -13.31 0.000448215 677 4 1 7 [+] picture button
zgc:77868 ENSDART00000014036 Optineurin. [Source:Uniprot/SWISSPROT;Acc:Q5RI56]
14.2988 -14.23 0.00044948 534 8 2 13 [+] picture button
ENSDART00000093359 NOT ANNOTATED
15.5376 -14.31 0.000451598 700 7 1 9 [+] picture button
LOC798705 ENSDART00000102600 Eip93F CG18389-PA [Source:RefSeq_peptide;Acc:NP_652002]Eip93F CG18389-PA [Source:RefSeq_peptide;Acc:NP_652002] BY ORTHOLOGY TO:CG18389-RA
14.3122 -16.98 0.000472091 700 4 1 4 [+] picture button
dlgap1 ENSDART00000008842 Disks large-associated protein 1 (DAP-1) (Guanylate kinase-associated protein). [Source:Uniprot/SWISSPROT;Acc:Q7ZYZ6]
15.2869 -13.17 0.000522337 700 6 1 10 [+] picture button

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Download table: GFF TXT
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