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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-93

792 hits found.


Page 1 of 16
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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slain2 ENSDART00000029788 SLAIN motif family, member 2 [Source:RefSeq_peptide;Acc:NP_001038311]
16.6374 -21.06 1.37401e-07 1574 1 1 1 [+] picture button
LOC562150 ENSDART00000046913 AT-rich interactive domain-containing protein 4B (ARID domain- containing protein 4B) (Histone deacetylase complex subunit SAP180) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Retinoblastoma-binding protein 1-like 1) (Breast c [Source:Uniprot/SWISSPROT;Acc:Q4LE39]AT-rich interactive domain-containing protein 4B (ARID domain- containing protein 4B) (Histone deacetylase complex subunit SAP180) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Retinoblastoma-binding protein 1-like 1) (Breast c [Source:Uniprot/SWISSPROT;Acc:Q4LE39] BY ORTHOLOGY TO:ENSORLT00000015668
16.837 -17.5 3.44566e-07 700 6 1 14 [+] picture button
DOCK4 ENSDART00000087817 Dedicator of cytokinesis protein 4. [Source:Uniprot/SWISSPROT;Acc:Q8N1I0]
16.3864 -16.78 6.00332e-07 700 5 5 9 [+] picture button
USP46 ENSDART00000066678 Ubiquitin carboxyl-terminal hydrolase 46 (EC 3.1.2.15) (Ubiquitin thioesterase 46) (Ubiquitin-specific-processing protease 46) (Deubiquitinating enzyme 46). [Source:Uniprot/SWISSPROT;Acc:P62068]
17.8436 -22.18 7.39788e-07 700 4 1 8 [+] picture button
LOC100005268 ENSDART00000084354 cytoplasmic polyadenylation element binding protein 3 [Source:MarkerSymbol;Acc:MGI:2443075]cytoplasmic polyadenylation element binding protein 3 [Source:MarkerSymbol;Acc:MGI:2443075] BY ORTHOLOGY TO:ENSMUST00000079754
17.9158 -21.13 1.75265e-06 700 10 3 13 [+] picture button
si:dkey-27p7.2 ENSDART00000026152 hypothetical protein LOC570669 [Source:RefSeq_peptide;Acc:NP_001038672]
16.5939 -17.75 3.02437e-06 700 9 3 13 [+] picture button
zgc:101644 ENSDART00000007914 hypothetical protein LOC494100 [Source:RefSeq_peptide;Acc:NP_001008643]
17.7913 -17.13 5.64817e-06 433 10 2 15 [+] picture button
LOC558697 ENSDART00000050533 similar to cyclin I (FLJ16793), mRNA [Source:RefSeq_dna;Acc:NM_001039780]similar to cyclin I (FLJ16793), mRNA [Source:RefSeq_dna;Acc:NM_001039780] BY ORTHOLOGY TO:ENSCAFT00000036933
17.0608 -21.27 5.77251e-06 700 10 1 12 [+] picture button
zgc:136881 ENSDART00000102901 polymerase (DNA directed), eta [Source:RefSeq_peptide;Acc:NP_001035337]
17.3315 -11.59 7.32842e-06 348 5 2 13 [+] picture button
Q9YHE7_DANRE ENSDART00000078180 Protein tyrosine phosphatase H1 (EC 3.1.3.48) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9YHE7]
16.3864 -12.72 8.70326e-06 700 2 1 5 [+] picture button
LOC794722 ENSDART00000066587 Kelch-like protein 14. [Source:Uniprot/SWISSPROT;Acc:Q9P2G3]Kelch-like protein 14. [Source:Uniprot/SWISSPROT;Acc:Q9P2G3] BY ORTHOLOGY TO:ENSOANT00000008934
16.8239 -19.48 8.75904e-06 700 4 5 8 [+] picture button
LOC563544 ENSDART00000085290 Cytoplasmic polyadenylation element-binding protein 4 (CPE-binding protein 4) (CPE-BP4) (hCPEB-4). [Source:Uniprot/SWISSPROT;Acc:Q17RY0]Cytoplasmic polyadenylation element-binding protein 4 (CPE-binding protein 4) (CPE-BP4) (hCPEB-4). [Source:Uniprot/SWISSPROT;Acc:Q17RY0] BY ORTHOLOGY TO:ENSORLT00000002129
17.5813 -17.75 9.03916e-06 700 3 4 6 [+] picture button
cdkn3 ENSDART00000057155 Cdkn3 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q7ZWJ8]
18.4199 -18.7 9.04588e-06 251 7 3 20 [+] picture button
mtnr1ar ENSDART00000054674 Melatonin receptor type 1A Z1.7 (MEL-1A-R) (Fragment). [Source:Uniprot/SWISSPROT;Acc:P51046]
17.3609 -14.61 1.08273e-05 524 7 4 15 [+] picture button
NP_001073649.1 ENSDART00000077389 zinc finger protein 148 [Source:RefSeq_peptide;Acc:NP_001073649]
16.4133 -13.56 1.10199e-05 610 12 11 20 [+] picture button
egr1 ENSDART00000054460 Early growth response protein 1 (EGR-1) (Krox24). [Source:Uniprot/SWISSPROT;Acc:P26632]
19.0019 -20.64 1.13127e-05 700 4 4 10 [+] picture button
st5 ENSDART00000054368 suppression of tumorigenicity 5 [Source:RefSeq_peptide;Acc:NP_001002327]
17.2012 -14.81 1.22029e-05 700 7 2 11 [+] picture button
si:ch211-203l9.3 ENSDART00000088359 Zinc finger protein 704. [Source:Uniprot/SWISSPROT;Acc:Q1LY51]
16.4459 -13.63 1.22407e-05 700 5 1 7 [+] picture button
LOC100004341 ENSDART00000074399 calcium/calmodulin-dependent protein kinase II inhibitor 1 [Source:RefSeq_peptide;Acc:NP_061054]calcium/calmodulin-dependent protein kinase II inhibitor 1 [Source:RefSeq_peptide;Acc:NP_061054] BY ORTHOLOGY TO:ENSGACT00000010326
18.1987 -20.35 1.54856e-05 700 7 3 13 [+] picture button
ccnb2 ENSDART00000052541 cyclin B2 [Source:RefSeq_peptide;Acc:NP_955462]
17.1692 -16.16 1.55124e-05 247 7 3 16 [+] picture button
fgf3 ENSDART00000098280 Fibroblast growth factor 3 precursor (FGF-3) (HBGF-3). [Source:Uniprot/SWISSPROT;Acc:P48802]
18.3816 -24.16 1.6918e-05 700 7 2 14 [+] picture button
si:ch211-221n23.1 ENSDART00000056135 si:ch211-221n23.1 [Source:RefSeq_peptide;Acc:NP_001076421]
17.0706 -12.92 2.27195e-05 700 5 9 10 [+] picture button
zgc:162267 ENSDART00000073399 hypothetical protein LOC100037371 [Source:RefSeq_peptide;Acc:NP_001082992]
17.0555 -14.92 2.27421e-05 145 5 6 21 [+] picture button
zgc:154082 ENSDART00000059506 hypothetical protein LOC777711 [Source:RefSeq_peptide;Acc:NP_001071227]
18.6788 -12.88 2.29625e-05 343 5 1 11 [+] picture button
zgc:92785 ENSDART00000102439 hypothetical protein LOC436820 [Source:RefSeq_peptide;Acc:NP_001002547]
17.0697 -16.56 2.64397e-05 700 4 1 12 [+] picture button
aldh16a1 ENSDART00000055283 aldehyde dehydrogenase 16 family, member A1 [Source:RefSeq_peptide;Acc:NP_001073423]
17.5103 -10.77 2.93889e-05 252 6 1 17 [+] picture button
zgc:110621 ENSDART00000039165 hypothetical protein LOC554088 [Source:RefSeq_peptide;Acc:NP_001019561]
17.9512 -16.2 3.43849e-05 380 12 7 27 [+] picture button
LOC569699 ENSDART00000074308 Uncharacterized protein C22orf30. [Source:Uniprot/SPTREMBL;Acc:Q5THK1]Uncharacterized protein C22orf30. [Source:Uniprot/SPTREMBL;Acc:Q5THK1] BY ORTHOLOGY TO:ENSGALT00000011102
18.0126 -19.66 3.82439e-05 700 8 1 17 [+] picture button
itm2c ENSDART00000098018 hypothetical protein LOC335863 [Source:RefSeq_peptide;Acc:NP_956274]
17.1683 -19.72 3.98969e-05 700 6 6 12 [+] picture button
UBXD4 ENSDART00000097742 UBX domain-containing protein 4. [Source:Uniprot/SWISSPROT;Acc:P68543]
16.4901 -18.67 4.35057e-05 700 10 1 10 [+] picture button
zgc:158749 ENSDART00000077307 hypothetical protein LOC563878 [Source:RefSeq_peptide;Acc:NP_001038498]
16.9418 -14.96 4.38077e-05 237 8 3 16 [+] picture button
ccna1 ENSDART00000002166 cyclin A1 [Source:RefSeq_peptide;Acc:NP_997983]
16.4005 -13.67 4.63814e-05 377 10 6 26 [+] picture button
lft1 ENSDART00000019196 lefty1 [Source:RefSeq_peptide;Acc:NP_571035]
17.2829 -15.13 4.89395e-05 268 9 1 18 [+] picture button
zgc:114134 ENSDART00000034287 hypothetical protein LOC565499 [Source:RefSeq_peptide;Acc:NP_001020708]
16.4251 -13.87 5.69119e-05 873 2 1 5 [+] picture button
LOC568361 ENSDART00000079232 LR11 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9R0N2]LR11 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9R0N2] BY ORTHOLOGY TO:ENSRNOT00000059974
16.717 -13.95 5.98487e-05 700 7 1 10 [+] picture button
glra4b ENSDART00000006474 Glycine receptor, alpha 4b (Fragment). [Source:Uniprot/SPTREMBL;Acc:A2BGE6]
17.8514 -13.36 6.54269e-05 308 5 1 12 [+] picture button
ENSDART00000089278 Homolog of Homo sapiens "KIAA1161 [Source:IPI;Acc:IPI00456649]"Homolog of Homo sapiens "KIAA1161 [Source:IPI;Acc:IPI00456649]" BY ORTHOLOGY TO:SINFRUT00000148515
16.7454 -17.04 6.77128e-05 700 6 4 8 [+] picture button
zgc:64114 ENSDART00000054788 hypothetical protein LOC378866 [Source:RefSeq_peptide;Acc:NP_956401]
17.5079 -11.01 6.87349e-05 560 12 1 21 [+] picture button
LOC796585 ENSDART00000078783 NOT ANNOTATED
17.5482 -16.33 7.14338e-05 700 7 1 9 [+] picture button
orc6l ENSDART00000026615 origin recognition complex, subunit 6 homolog-like [Source:RefSeq_peptide;Acc:NP_997836]
18.0624 -12.72 7.94917e-05 556 6 3 10 [+] picture button
zgc:152659 ENSDART00000062656 hypothetical protein LOC751596 [Source:RefSeq_peptide;Acc:NP_001038806]
18.5336 -21.94 8.60513e-05 282 10 2 20 [+] picture button
ENSDART00000076976 NOT ANNOTATED
17.5501 -20.88 9.47936e-05 700 6 1 11 [+] picture button
arrdc1 ENSDART00000098360 arrestin domain containing 1 [Source:RefSeq_peptide;Acc:NP_001004561]
17.8344 -17.51 0.000103425 600 5 1 10 [+] picture button
A2CE81_DANRE ENSDART00000092285 Novel protein similar to vertebrate mutS homolog 3 (E. coli) (MSH3). [Source:Uniprot/SPTREMBL;Acc:A2CE81]
16.926 -22.22 0.000118002 700 3 1 4 [+] picture button
zgc:92772 ENSDART00000036452 hypothetical protein LOC436828 [Source:RefSeq_peptide;Acc:NP_001002555]
18.4664 -21.51 0.000131514 327 2 1 7 [+] picture button
zgc:56429 ENSDART00000097310 hypothetical protein LOC393247 [Source:RefSeq_peptide;Acc:NP_956571]
17.0574 -12.04 0.000136532 700 5 1 8 [+] picture button
zgc:92917 ENSDART00000040723 hypothetical protein LOC436802 [Source:RefSeq_peptide;Acc:NP_001002529]
16.7144 -21.48 0.000136775 261 6 2 14 [+] picture button
MARCH8 ENSDART00000090430 E3 ubiquitin-protein ligase MARCH8 (EC 6.3.2.-) (Membrane-associated RING finger protein 8) (Membrane-associated RING-CH protein VIII) (MARCH-VIII) (RING finger protein 178) (Cellular modulator of immune recognition) (c-MIR). [Source:Uniprot/SWISSPROT;Acc:Q5T0T0]
17.3198 -19.25 0.000154159 700 4 2 9 [+] picture button
LOC565831 ENSDART00000075546 Heat shock factor 2-binding protein. [Source:Uniprot/SWISSPROT;Acc:O75031]Heat shock factor 2-binding protein. [Source:Uniprot/SWISSPROT;Acc:O75031] BY ORTHOLOGY TO:ENSXETT00000029946
16.8213 -16.03 0.000173371 700 1 1 2 [+] picture button
sh3gl1 ENSDART00000100491 SH3-domain GRB2-like 1a [Source:RefSeq_peptide;Acc:NP_958905]
19.3073 -24.21 0.0001925 365 10 4 21 [+] picture button

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Download table: GFF TXT
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