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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-9*

661 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
picture button picture button picture button picture button picture button picture button picture button picture button picture button picture button
tcea1 ENSDART00000009176 transcription elongation factor A (SII) 1 [Source:RefSeq_peptide;Acc:NP_956288]
16.961 -9.59 7.08396e-07 544 4 2 6 [+] picture button
ENSDART00000101233 NOT ANNOTATED
16.049 -11.18 1e-06 700 14 1 3 [+] picture button
ENSDART00000076291 NOT ANNOTATED
16.049 -11.18 1e-06 700 16 1 3 [+] picture button
ppp6c ENSDART00000007458 protein phosphatase 6, catalytic subunit [Source:RefSeq_peptide;Acc:NP_957299]
18.3163 -14.87 1.71708e-05 660 4 1 4 [+] picture button
col9a2 ENSDART00000103072 type IX collagen alpha 2 precursor [Source:RefSeq_peptide;Acc:NP_997744]
17.1103 -9.6 8.35596e-05 700 7 1 7 [+] picture button
eapp ENSDART00000021942 e2f-associated phosphoprotein [Source:RefSeq_peptide;Acc:NP_956078]
16.4709 -9.25 0.000113135 325 10 3 15 [+] picture button
cask ENSDART00000040843 calcium/calmodulin-dependent serine protein kinase [Source:RefSeq_peptide;Acc:NP_694420]
15.9639 -9.49 0.000227174 700 3 11 3 [+] picture button
zgc:103650 ENSDART00000033872 hypothetical protein LOC492493 [Source:RefSeq_peptide;Acc:NP_001007366]
17.9463 -11 0.000295251 219 6 1 12 [+] picture button
zgc:101766 ENSDART00000051146 Doublesex- and mab-3-related transcription factor 3a (Dmrt7a). [Source:Uniprot/SWISSPROT;Acc:P83758]
16.4551 -11.67 0.000307891 369 7 3 10 [+] picture button
LOC565592 ENSDART00000087246 androgen-induced prostate proliferative shutoff associated protein [Source:RefSeq_peptide;Acc:NP_055847]androgen-induced prostate proliferative shutoff associated protein [Source:RefSeq_peptide;Acc:NP_055847] BY ORTHOLOGY TO:ENSXETT00000037051
16.2218 -11.14 0.000328735 700 8 1 10 [+] picture button
asz1 ENSDART00000005145 ankyrin repeat, SAM and basic leucine zipper domain containing 1 [Source:RefSeq_peptide;Acc:NP_956524]
16.0031 -10.72 0.000353735 201 8 2 20 [+] picture button
zgc:63572 ENSDART00000065104 Transmembrane protein 185-like. [Source:Uniprot/SWISSPROT;Acc:Q7SYC7]
16.049 -17.44 0.00043919 700 6 3 5 [+] picture button
zgc:112290 ENSDART00000078351 hypothetical protein LOC619260 [Source:RefSeq_peptide;Acc:NP_001028913]
16.4403 -9.59 0.000476079 431 9 1 11 [+] picture button
zgc:73078 ENSDART00000021753 cyclin C [Source:RefSeq_peptide;Acc:NP_956245]
15.8614 -16.22 0.000535202 700 8 2 11 [+] picture button
si:dkey-246k9.2 ENSDART00000074040 Novel protein similar to human and mouse BTB (POZ) domain containing 3 (BTBD3) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5RG22]
15.8926 -11.62 0.000558077 700 3 2 3 [+] picture button
si:ch211-214k9.1 ENSDART00000047834 Neuroblastoma-amplified gene protein homolog. [Source:Uniprot/SWISSPROT;Acc:Q5TYW4]
16.4881 -11.3 0.000558563 700 5 1 6 [+] picture button
A3RI57_DANRE ENSDART00000030111 Integrin beta 8 (Fragment). [Source:Uniprot/SPTREMBL;Acc:A3RI57]
16.2574 -9.29 0.000615051 700 2 1 2 [+] picture button
zgc:154100 ENSDART00000093222 hypothetical protein LOC767629 [Source:RefSeq_peptide;Acc:NP_001070039]
17.1656 -10.68 0.000692985 375 10 2 15 [+] picture button
zcchc8 ENSDART00000062373 zinc finger, CCHC domain containing 8 [Source:RefSeq_peptide;Acc:NP_001077287]
17.2465 -14.2 0.000701481 381 9 2 10 [+] picture button
si:ch211-147h1.3 ENSDART00000066379 hypothetical protein LOC559717 [Source:RefSeq_peptide;Acc:NP_001038368]
16.7377 -12.42 0.000745043 700 9 2 9 [+] picture button
zgc:103591 ENSDART00000066452 Selenoprotein K. [Source:Uniprot/SWISSPROT;Acc:Q66I79]
15.7552 -10.9 0.000775467 700 4 1 5 [+] picture button
ormdl1 ENSDART00000014660 ORM1-like protein 1. [Source:Uniprot/SWISSPROT;Acc:Q8JFB7]
16.2199 -14.02 0.000794283 1102 1 2 1 [+] picture button
ZBTB39 ENSDART00000006881 Zinc finger and BTB domain-containing protein 39. [Source:Uniprot/SWISSPROT;Acc:O15060]
15.9712 -8.26 0.000798264 700 9 2 15 [+] picture button
gdf9 ENSDART00000019296 growth differentiation factor 9 [Source:RefSeq_peptide;Acc:NP_001012383]
15.6847 -17.21 0.000829795 751 6 1 7 [+] picture button
zgc:103530 ENSDART00000065824 hypothetical protein LOC449818 [Source:RefSeq_peptide;Acc:NP_001005991]
16.994 -13.08 0.000938238 700 5 2 5 [+] picture button
actr6 ENSDART00000003715 ARP6 actin-related protein 6 homolog [Source:RefSeq_peptide;Acc:NP_955990]
16.9508 -10.75 0.0010124 365 7 2 11 [+] picture button
zgc:55805 ENSDART00000003544 GA binding protein transcription factor, beta subunit 1, 53kDa [Source:RefSeq_peptide;Acc:NP_997877]
16.2122 -12.24 0.00103882 700 5 1 6 [+] picture button
ENSDART00000092356 NOT ANNOTATED
16.5024 -11.04 0.00112531 700 9 1 8 [+] picture button
zgc:63635 ENSDART00000066106 Zgc:63635 protein. [Source:Uniprot/SPTREMBL;Acc:Q7SY05]
16.7986 -14.22 0.00132228 700 2 1 2 [+] picture button
bcl7b ENSDART00000059135 B-cell CLL/lymphoma 7b [Source:RefSeq_peptide;Acc:NP_001006018]
17.4299 -11.97 0.00137755 700 9 1 9 [+] picture button
vdac1 ENSDART00000066373 Voltage-dependent anion channel 1 [Source:RefSeq_peptide;Acc:NP_001001404]
16.7484 -10.24 0.00158666 700 12 1 11 [+] picture button
si:dkey-98p3.2 ENSDART00000097355 hypothetical protein LOC555282 [Source:RefSeq_peptide;Acc:NP_001025256]
16.6003 -10.19 0.00168993 409 5 1 6 [+] picture button
zgc:63531 ENSDART00000101603 kinase D-interacting substance-like [Source:RefSeq_peptide;Acc:NP_956276]
17.0912 -14.64 0.00172188 700 11 2 9 [+] picture button
LOC100001445 ENSDART00000101232 NOT ANNOTATED
16.4659 -11.4 0.00172188 700 7 1 4 [+] picture button
c10orf119 ENSDART00000077655 hypothetical protein LOC321119 [Source:RefSeq_peptide;Acc:NP_997743]
18.7465 -14.77 0.00173539 302 8 2 17 [+] picture button
zgc:136613 ENSDART00000078625 Zgc:136613 protein. [Source:Uniprot/SPTREMBL;Acc:Q29RF0]
16.5685 -10.19 0.00178342 407 5 1 7 [+] picture button
ADRA1B (2 of 3) ENSDART00000100242 Alpha-1B adrenergic receptor (Alpha 1B-adrenoceptor) (Alpha 1B- adrenoreceptor). [Source:Uniprot/SWISSPROT;Acc:P35368]
17.0844 -15.65 0.00180498 700 6 1 8 [+] picture button
rbm4l ENSDART00000077395 RNA binding motif protein 4 [Source:RefSeq_peptide;Acc:NP_955971]
16.6321 -16.45 0.00186555 700 3 1 2 [+] picture button
zgc:77868 ENSDART00000014036 Optineurin. [Source:Uniprot/SWISSPROT;Acc:Q5RI56]
16.9438 -16.41 0.00192376 534 8 2 13 [+] picture button
A3KNM8_DANRE ENSDART00000062941 Hypothetical protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:A3KNM8]
16.5746 -8.53 0.00195425 108 2 2 4 [+] picture button
si:ch211-152m4.1 ENSDART00000067251 Novel protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5RGF9]
17.9249 -17.09 0.00207274 700 7 2 8 [+] picture button
h2afvl ENSDART00000062324 histone 2A family member ZA [Source:RefSeq_peptide;Acc:NP_001036788]
16.5886 -13.89 0.00209609 379 8 2 10 [+] picture button
zgc:63531 ENSDART00000019181 kinase D-interacting substance-like [Source:RefSeq_peptide;Acc:NP_956276]
16.9552 -14.64 0.00215152 756 11 1 8 [+] picture button
zgc:103767 ENSDART00000002644 hypothetical protein LOC449836 [Source:RefSeq_peptide;Acc:NP_001006006]
16.4965 -9.7 0.00223779 366 8 2 12 [+] picture button
skap2 ENSDART00000105655 hypothetical protein LOC563784 [Source:RefSeq_peptide;Acc:NP_001073480]
16.4931 -13.18 0.00225093 700 6 2 7 [+] picture button
EGLN1 (2 of 2) ENSDART00000056927 Egl nine homolog 1 (EC 1.14.11.-) (Hypoxia-inducible factor prolyl hydroxylase 2) (HIF-prolyl hydroxylase 2) (HIF-PH2) (HPH-2) (Prolyl hydroxylase domain-containing protein 2) (PHD2) (SM-20). [Source:Uniprot/SWISSPROT;Acc:Q9GZT9]
16.0992 -15.56 0.00226076 700 6 1 6 [+] picture button
mcm5 ENSDART00000024316 MCM5 minichromosome maintenance deficient 5 [Source:RefSeq_peptide;Acc:NP_848523]
16.4856 -13.83 0.00228024 700 4 1 3 [+] picture button
zgc:136967 ENSDART00000073907 hypothetical protein LOC568223 [Source:RefSeq_peptide;Acc:NP_001034911]
15.9603 -9.55 0.00229757 542 9 2 9 [+] picture button
fam65a ENSDART00000089549 hypothetical protein LOC566573 [Source:RefSeq_peptide;Acc:NP_001038573]
15.9448 -11.76 0.00234377 700 7 2 8 [+] picture button
SH2D5 ENSDART00000003211 SH2 domain-containing protein 5. [Source:Uniprot/SWISSPROT;Acc:Q6ZV89]
17.2341 -11.9 0.00237237 659 4 1 4 [+] picture button

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Download table: GFF TXT
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