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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-34c

865 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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tax1bp3 ENSDART00000082223 Tax1 (human T-cell leukemia virus type I) binding protein 3 [Source:RefSeq_peptide;Acc:NP_998635]
17.8705 -24.08 0.00000000651253 744 4 1 4 [+] picture button
LOC799605 ENSDART00000091252 Spermatogenesis-associated protein 13. [Source:Uniprot/SWISSPROT;Acc:Q96N96]Spermatogenesis-associated protein 13. [Source:Uniprot/SWISSPROT;Acc:Q96N96] BY ORTHOLOGY TO:ENST00000382108
17.4468 -24.43 0.000000182361 700 5 1 7 [+] picture button
si:ch211-234f14.1 ENSDART00000102888 Novel protein similar to vertebrate cyclin-dependent kinase 6 (CDK6) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1L915]
17.4939 -18.18 0.000000264652 700 9 1 13 [+] picture button
fut8 ENSDART00000027688 fucosyltransferase 8 [Source:RefSeq_peptide;Acc:NP_001003855]
17.1597 -17.11 0.000000300912 700 6 3 12 [+] picture button
stk38l ENSDART00000066892 serine/threonine kinase 38 like [Source:RefSeq_peptide;Acc:NP_957276]
16.8677 -21.53 0.00000032199 700 10 1 12 [+] picture button
fkbp1b ENSDART00000012229 FK506 binding protein 1b [Source:RefSeq_peptide;Acc:NP_957106]
16.8055 -22 0.000000323471 621 6 5 7 [+] picture button
kny ENSDART00000026569 knypek [Source:RefSeq_peptide;Acc:NP_571935]
16.0618 -16.86 0.000000338609 700 3 1 4 [+] picture button
zgc:113026 ENSDART00000052127 hypothetical protein LOC503523 [Source:RefSeq_peptide;Acc:NP_001012505]
18.2142 -15.6 0.000000534014 235 8 12 15 [+] picture button
st6gal1 ENSDART00000065366 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:RefSeq_peptide;Acc:NP_001003853]
16.0942 -16.31 0.000000596401 456 7 1 10 [+] picture button
zgc:92251 ENSDART00000023484 Sodium/bile acid cotransporter 7 (Na(+)/bile acid cotransporter 7) (Solute carrier family 10 member 7). [Source:Uniprot/SWISSPROT;Acc:Q6DHK8]
16.6234 -14.05 0.0000007012 446 9 1 16 [+] picture button
LOC100003608 ENSDART00000099357 proline rich 5 (renal) [Source:RefSeq_peptide;Acc:NP_001025151]proline rich 5 (renal) [Source:RefSeq_peptide;Acc:NP_001025151] BY ORTHOLOGY TO:ENSGALT00000022984
16.6078 -20.06 0.000001 700 11 2 2 [+] picture button
LOC794905 ENSDART00000088912 Complexin-2 (Complexin II) (CPX II) (Synaphin-1). [Source:Uniprot/SWISSPROT;Acc:P84087]Complexin-2 (Complexin II) (CPX II) (Synaphin-1). [Source:Uniprot/SWISSPROT;Acc:P84087] BY ORTHOLOGY TO:ENSRNOT00000039898
16.2321 -18.8 0.00000179257 700 5 2 5 [+] picture button
tnc ENSDART00000078607 tenascin C [Source:RefSeq_peptide;Acc:NP_570982]
18.3273 -14.55 0.00000240594 154 5 2 8 [+] picture button
tbca ENSDART00000023997 tubulin cofactor a [Source:RefSeq_peptide;Acc:NP_957348]
17.7616 -15.01 0.00000248568 240 5 3 12 [+] picture button
zgc:65956 ENSDART00000012938 phosphoglycerate dehydrogenase [Source:RefSeq_peptide;Acc:NP_955871]
16.0647 -19.6 0.00000287808 260 6 6 17 [+] picture button
zgc:63910 ENSDART00000040998 Mitochondrial 18 kDa protein (MTP18). [Source:Uniprot/SWISSPROT;Acc:Q6PCS6]
16.0052 -14.04 0.00000385441 700 10 1 22 [+] picture button
taf5 ENSDART00000015007 TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:RefSeq_peptide;Acc:NP_001032508]
16.3661 -15.21 0.00000425497 399 6 1 7 [+] picture button
josd2 ENSDART00000080342 Josephin domain containing 2 [Source:RefSeq_peptide;Acc:NP_956445]
16.1166 -13.55 0.00000461419 700 7 5 8 [+] picture button
pgd ENSDART00000017728 phosphogluconate hydrogenase isoform 1 [Source:RefSeq_peptide;Acc:NP_998618]
16.0687 -19.43 0.00000471616 339 9 7 19 [+] picture button
tbc1d19 ENSDART00000025308 TBC1 domain family, member 19 [Source:RefSeq_peptide;Acc:NP_956785]
16.4041 -17.28 0.0000051988 209 7 2 17 [+] picture button
LOC571958 ENSDART00000066579 6-pyruvoyl tetrahydrobiopterin synthase (EC 4.2.3.12) (PTPS) (PTP synthase). [Source:Uniprot/SWISSPROT;Acc:Q03393]6-pyruvoyl tetrahydrobiopterin synthase (EC 4.2.3.12) (PTPS) (PTP synthase). [Source:Uniprot/SWISSPROT;Acc:Q03393] BY ORTHOLOGY TO:ENSXETT00000019399
16.7435 -13.68 0.00000536351 700 3 1 5 [+] picture button
mmp2 ENSDART00000026712 matrix metalloproteinase 2 [Source:RefSeq_peptide;Acc:NP_932333]
16.6606 -18.29 0.00000615316 849 2 3 5 [+] picture button
LOC795882 ENSDART00000074281 UPF0193 protein EVG1. [Source:Uniprot/SWISSPROT;Acc:Q9BZE7]UPF0193 protein EVG1. [Source:Uniprot/SWISSPROT;Acc:Q9BZE7] BY ORTHOLOGY TO:ENSGALT00000020086
17.266 -22.79 0.00000687324 700 8 3 8 [+] picture button
LOC563849 ENSDART00000063147 N-sulphoglucosamine sulphohydrolase precursor (EC 3.10.1.1) (Sulfoglucosamine sulfamidase) (Sulphamidase). [Source:Uniprot/SWISSPROT;Acc:P51688]N-sulphoglucosamine sulphohydrolase precursor (EC 3.10.1.1) (Sulfoglucosamine sulfamidase) (Sulphamidase). [Source:Uniprot/SWISSPROT;Acc:P51688] BY ORTHOLOGY TO:ENSGACT00000025181
16.3623 -14.38 0.00000748753 700 5 2 5 [+] picture button
zgc:110051 ENSDART00000044057 Neuronal-specific septin-3. [Source:Uniprot/SWISSPROT;Acc:A2BGU8]
16.5177 -20.6 0.00000807881 700 6 1 10 [+] picture button
zgc:153995 ENSDART00000083558 hypothetical protein LOC567592 [Source:RefSeq_peptide;Acc:NP_001071083]
17.2292 -14.26 0.00000986836 372 6 1 9 [+] picture button
LOC566046 ENSDART00000093239 Wilms tumor 1 interacting protein [Source:RefSeq_peptide;Acc:NP_001073905]Wilms tumor 1 interacting protein [Source:RefSeq_peptide;Acc:NP_001073905] BY ORTHOLOGY TO:ENSPTRT00000020015
16.6585 -17.6 0.000011777 700 4 3 4 [+] picture button
khk ENSDART00000105218 ketohexokinase [Source:RefSeq_peptide;Acc:NP_001002636]
15.9515 -13.43 0.0000131489 236 7 2 18 [+] picture button
SLC37A3 ENSDART00000051032 solute carrier family 37 (glycerol-3-phosphate transporter), member 3 isoform 2 [Source:RefSeq_peptide;Acc:NP_115671]
16.1457 -20.96 0.0000151999 700 7 1 9 [+] picture button
ENSDART00000014439 Putative tenascin X. [Source:Uniprot/SPTREMBL;Acc:Q7SZG1]Putative tenascin X. [Source:Uniprot/SPTREMBL;Acc:Q7SZG1] BY ORTHOLOGY TO:SINFRUT00000138233
17.3027 -20.99 0.0000172421 700 9 2 8 [+] picture button
bcl2 ENSDART00000105690 Bcl2 (B-cell leukemia/lymphoma 2). [Source:Uniprot/SPTREMBL;Acc:Q564A4]
17.9295 -25.08 0.0000194508 383 7 5 12 [+] picture button
gmnn ENSDART00000052185 geminin, DNA replication inhibitor [Source:RefSeq_peptide;Acc:NP_956380]
16.5172 -13.56 0.0000203045 232 4 2 7 [+] picture button
strn3 ENSDART00000030131 Striatin, calmodulin binding protein 3. [Source:Uniprot/SPTREMBL;Acc:Q8AW55]
16.9039 -20.04 0.0000210581 700 4 6 5 [+] picture button
ikbkg ENSDART00000079852 inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma [Source:RefSeq_peptide;Acc:NP_001014366]
17.445 -22.97 0.0000232897 445 6 1 12 [+] picture button
zgc:55865 ENSDART00000036421 hypothetical protein LOC336998 [Source:RefSeq_peptide;Acc:NP_956339]
16.7435 -20.77 0.0000250148 143 2 1 4 [+] picture button
Q1JQ25_DANRE ENSDART00000024869 LOC553441 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1JQ25]
16.1778 -16.95 0.0000278678 280 8 1 8 [+] picture button
hells ENSDART00000080465 hypothetical protein LOC553328 [Source:RefSeq_peptide;Acc:NP_001032178]
18.2481 -15.78 0.0000281044 410 10 2 16 [+] picture button
Q29RD7_DANRE ENSDART00000103010 LOC407688 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q29RD7]
18.0662 -26.81 0.0000302787 700 7 1 7 [+] picture button
zgc:56412 ENSDART00000101740 hypothetical protein LOC406666 [Source:RefSeq_peptide;Acc:NP_998522]
17.223 -24.85 0.0000305827 700 5 3 7 [+] picture button
zgc:154082 ENSDART00000059506 hypothetical protein LOC777711 [Source:RefSeq_peptide;Acc:NP_001071227]
15.8987 -13.16 0.000031266 343 5 1 11 [+] picture button
vps18 ENSDART00000103352 Vacuolar protein sorting-associated protein 18 homolog. [Source:Uniprot/SWISSPROT;Acc:P59015]
16.2909 -19.05 0.0000321739 292 7 2 11 [+] picture button
zgc:101119 ENSDART00000058385 hypothetical protein LOC445163 [Source:RefSeq_peptide;Acc:NP_001003557]
16.4828 -18.95 0.0000322834 345 6 2 13 [+] picture button
hsd17b10 ENSDART00000016891 hydroxysteroid (17-beta) dehydrogenase 10 [Source:RefSeq_peptide;Acc:NP_001006098]
17.5296 -23.58 0.0000325846 395 8 2 11 [+] picture button
zgc:110197 ENSDART00000026059 hypothetical protein LOC550525 [Source:RefSeq_peptide;Acc:NP_001017827]
16.1048 -17.61 0.0000341908 700 7 1 9 [+] picture button
gria1a ENSDART00000021437 AMPA receptor subunit GluR1A [Source:RefSeq_peptide;Acc:NP_991161]
17.3091 -19.1 0.0000375804 187 1 2 1 [+] picture button
LOC568332 ENSDART00000086746 nrs-1 encodes an asparaginyl-tRNA synthetase that is required for embryonic viability and fertility [Source: WormBase]nrs-1 encodes an asparaginyl-tRNA synthetase that is required for embryonic viability and fertility [Source: WormBase] BY ORTHOLOGY TO:F22D6.3a.1
16.056 -20 0.0000414528 700 8 1 13 [+] picture button
sptb ENSDART00000040627 spectrin, beta, erythrocytic [Source:RefSeq_peptide;Acc:NP_571600]
16.1778 -11.18 0.0000423007 280 5 2 10 [+] picture button
zgc:153749 ENSDART00000060527 hypothetical protein LOC777619 [Source:RefSeq_peptide;Acc:NP_001071195]
15.9515 -18.28 0.0000460938 118 1 3 1 [+] picture button
A3KQR9_DANRE ENSDART00000092239 Novel protein similar to vertebrate Lix1 homolog (Mouse) like (LIX1L). [Source:Uniprot/SPTREMBL;Acc:A3KQR9]
16.0286 -26.41 0.0000467788 700 6 1 8 [+] picture button
si:dkey-209e8.1 ENSDART00000082715 Novel protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1LY94]
16.0205 -15.32 0.0000468654 700 5 1 5 [+] picture button

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Download table: GFF TXT
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