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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-34

904 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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ATAD3A ENSDART00000105883 ATPase family AAA domain-containing protein 3A. [Source:Uniprot/SWISSPROT;Acc:Q9NVI7]
15.7642 -22.81 0.0000000745728 700 3 3 3 [+] picture button
si:ch211-234f14.1 ENSDART00000102888 Novel protein similar to vertebrate cyclin-dependent kinase 6 (CDK6) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1L915]
16.8468 -21.94 0.000000264652 700 9 1 13 [+] picture button
foxp2 ENSDART00000060861 forkhead box P2 [Source:RefSeq_peptide;Acc:NP_001025253]
16.5017 -19.55 0.000000318198 381 5 9 6 [+] picture button
stk38l ENSDART00000066892 serine/threonine kinase 38 like [Source:RefSeq_peptide;Acc:NP_957276]
17.7773 -20.8 0.00000032199 700 10 1 12 [+] picture button
fkbp1b ENSDART00000012229 FK506 binding protein 1b [Source:RefSeq_peptide;Acc:NP_957106]
15.7235 -20.92 0.000000323471 621 6 5 7 [+] picture button
ralgps2 ENSDART00000037420 Ral-A exchange factor RalGPS2 [Source:RefSeq_peptide;Acc:NP_956768]
16.0445 -22.17 0.000000330401 700 5 8 5 [+] picture button
kny ENSDART00000026569 knypek [Source:RefSeq_peptide;Acc:NP_571935]
16.2403 -20.95 0.000000338609 700 3 1 4 [+] picture button
zgc:113026 ENSDART00000052127 hypothetical protein LOC503523 [Source:RefSeq_peptide;Acc:NP_001012505]
18.4199 -19.35 0.000000534014 235 8 12 15 [+] picture button
st6gal1 ENSDART00000065366 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:RefSeq_peptide;Acc:NP_001003853]
17.6914 -21.18 0.000000596401 456 7 1 10 [+] picture button
zgc:92251 ENSDART00000023484 Sodium/bile acid cotransporter 7 (Na(+)/bile acid cotransporter 7) (Solute carrier family 10 member 7). [Source:Uniprot/SWISSPROT;Acc:Q6DHK8]
16.704 -13.43 0.0000007012 446 9 1 16 [+] picture button
zgc:91850 ENSDART00000066127 hypothetical protein LOC445078 [Source:RefSeq_peptide;Acc:NP_001003472]
17.4235 -23.91 0.000001 700 6 1 4 [+] picture button
LOC100003608 ENSDART00000099357 proline rich 5 (renal) [Source:RefSeq_peptide;Acc:NP_001025151]proline rich 5 (renal) [Source:RefSeq_peptide;Acc:NP_001025151] BY ORTHOLOGY TO:ENSGALT00000022984
15.7241 -17.96 0.000001 700 11 2 2 [+] picture button
si:dkey-18e5.1 ENSDART00000091727 Novel protein similar to vertebrate neurotrophic tyrosine kinase, receptor, type 3 (NTRK3) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1LY70]
15.8574 -18.67 0.00000152664 700 6 5 9 [+] picture button
LOC794905 ENSDART00000088912 Complexin-2 (Complexin II) (CPX II) (Synaphin-1). [Source:Uniprot/SWISSPROT;Acc:P84087]Complexin-2 (Complexin II) (CPX II) (Synaphin-1). [Source:Uniprot/SWISSPROT;Acc:P84087] BY ORTHOLOGY TO:ENSRNOT00000039898
16.0993 -18.09 0.00000179257 700 5 2 5 [+] picture button
tnc ENSDART00000078607 tenascin C [Source:RefSeq_peptide;Acc:NP_570982]
19.8981 -21.03 0.00000240594 154 5 2 8 [+] picture button
tbca ENSDART00000023997 tubulin cofactor a [Source:RefSeq_peptide;Acc:NP_957348]
16.0322 -11.92 0.00000248568 240 5 3 12 [+] picture button
LOC647309 ENSDART00000099496 gene model 606, (NCBI) [Source:MarkerSymbol;Acc:MGI:2685452]gene model 606, (NCBI) [Source:MarkerSymbol;Acc:MGI:2685452] BY ORTHOLOGY TO:ENSMUST00000089832
15.9716 -17.97 0.00000254137 700 9 2 12 [+] picture button
zgc:101841 ENSDART00000026747 hypothetical protein LOC403055 [Source:RefSeq_peptide;Acc:NP_991302]
15.9668 -21.14 0.00000259774 311 7 2 11 [+] picture button
zgc:63910 ENSDART00000040998 Mitochondrial 18 kDa protein (MTP18). [Source:Uniprot/SWISSPROT;Acc:Q6PCS6]
16.3102 -16.13 0.00000385441 700 10 1 22 [+] picture button
taf5 ENSDART00000015007 TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:RefSeq_peptide;Acc:NP_001032508]
16.2256 -16.06 0.00000425497 399 6 1 7 [+] picture button
g22p1 ENSDART00000105858 thyroid autoantigen 70kDa (Ku antigen) [Source:RefSeq_peptide;Acc:NP_956198]
16.0322 -18.67 0.00000451451 194 5 5 9 [+] picture button
tbc1d19 ENSDART00000025308 TBC1 domain family, member 19 [Source:RefSeq_peptide;Acc:NP_956785]
16.7144 -18.43 0.0000051988 209 7 2 17 [+] picture button
LOC571958 ENSDART00000066579 6-pyruvoyl tetrahydrobiopterin synthase (EC 4.2.3.12) (PTPS) (PTP synthase). [Source:Uniprot/SWISSPROT;Acc:Q03393]6-pyruvoyl tetrahydrobiopterin synthase (EC 4.2.3.12) (PTPS) (PTP synthase). [Source:Uniprot/SWISSPROT;Acc:Q03393] BY ORTHOLOGY TO:ENSXETT00000019399
17.1692 -11.92 0.00000536351 700 3 1 5 [+] picture button
LOC795882 ENSDART00000074281 UPF0193 protein EVG1. [Source:Uniprot/SWISSPROT;Acc:Q9BZE7]UPF0193 protein EVG1. [Source:Uniprot/SWISSPROT;Acc:Q9BZE7] BY ORTHOLOGY TO:ENSGALT00000020086
15.9955 -21.15 0.00000687324 700 8 3 8 [+] picture button
zgc:153995 ENSDART00000083558 hypothetical protein LOC567592 [Source:RefSeq_peptide;Acc:NP_001071083]
16.4263 -14.6 0.00000986836 372 6 1 9 [+] picture button
dld ENSDART00000099224 Delta-like protein D precursor (DeltaD protein) (After eight protein). [Source:Uniprot/SWISSPROT;Acc:Q8UWJ4]
16.3962 -22.77 0.0000102213 731 5 8 7 [+] picture button
LOC555645 ENSDART00000085754 GTP-binding protein RAB19B [Source:RefSeq_peptide;Acc:NP_001008749]GTP-binding protein RAB19B [Source:RefSeq_peptide;Acc:NP_001008749] BY ORTHOLOGY TO:ENSMMUT00000014582
16.179 -22.04 0.0000112743 700 4 1 3 [+] picture button
AP3B2 ENSDART00000092663 AP-3 complex subunit beta-2 (Adapter-related protein complex 3 beta-2 subunit) (Beta3B-adaptin) (Adaptor protein complex AP-3 beta-2 subunit) (AP-3 complex beta-2 subunit) (Clathrin assembly protein complex 3 beta-2 large chain) (Neuron-specific vesicle c [Source:Uniprot/SWISSPROT;Acc:Q13367]
15.7642 -20.71 0.0000114537 700 8 3 8 [+] picture button
LOC566046 ENSDART00000093239 Wilms tumor 1 interacting protein [Source:RefSeq_peptide;Acc:NP_001073905]Wilms tumor 1 interacting protein [Source:RefSeq_peptide;Acc:NP_001073905] BY ORTHOLOGY TO:ENSPTRT00000020015
16.737 -17.52 0.000011777 700 4 3 4 [+] picture button
zgc:92599 ENSDART00000026516 hypothetical protein LOC447868 [Source:RefSeq_peptide;Acc:NP_001004607]
16.568 -22.19 0.0000119694 669 8 2 13 [+] picture button
p2rx1 ENSDART00000002866 purinergic receptor P2X, ligand-gated ion channel, 1 [Source:RefSeq_peptide;Acc:NP_945333]
15.8817 -20.2 0.0000125234 700 8 1 9 [+] picture button
khk ENSDART00000105218 ketohexokinase [Source:RefSeq_peptide;Acc:NP_001002636]
16.0322 -20.63 0.0000131489 236 7 2 18 [+] picture button
LOC567801 ENSDART00000080858 Plasma protease C1 inhibitor precursor (C1 Inh) (C1Inh) (C1 esterase inhibitor) (C1-inhibiting factor). [Source:Uniprot/SWISSPROT;Acc:P05155]Plasma protease C1 inhibitor precursor (C1 Inh) (C1Inh) (C1 esterase inhibitor) (C1-inhibiting factor). [Source:Uniprot/SWISSPROT;Acc:P05155] BY ORTHOLOGY TO:ENSCAFT00000012508
16.5939 -20.21 0.0000146768 700 3 1 4 [+] picture button
LOC565069 ENSDART00000078904 CG1319-PA [Source:RefSeq_peptide;Acc:NP_647889]CG1319-PA [Source:RefSeq_peptide;Acc:NP_647889] BY ORTHOLOGY TO:CG1319-RA
16.0322 -14.56 0.0000148645 273 6 2 8 [+] picture button
CACNA1E ENSDART00000089972 Voltage-dependent R-type calcium channel subunit alpha-1E (Voltage- gated calcium channel subunit alpha Cav2.3) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (Brain calcium channel II) (BII). [Source:Uniprot/SWISSPROT;Acc:Q15878]
16.4897 -31.16 0.0000176143 700 5 2 5 [+] picture button
XR_029238.1 ENSDART00000074694 similar to putative beta-2 adrenergic receptor (LOC565838), mRNA [Source:RefSeq_dna;Acc:XR_029238]
16.179 -22.86 0.0000186076 700 4 1 5 [+] picture button
bcl2 ENSDART00000105690 Bcl2 (B-cell leukemia/lymphoma 2). [Source:Uniprot/SPTREMBL;Acc:Q564A4]
17.3508 -22.43 0.0000194508 383 7 5 12 [+] picture button
zgc:153677 ENSDART00000097486 hypothetical protein LOC767658 [Source:RefSeq_peptide;Acc:NP_001070066]
16.6007 -22.06 0.0000201276 189 6 1 10 [+] picture button
gmnn ENSDART00000052185 geminin, DNA replication inhibitor [Source:RefSeq_peptide;Acc:NP_956380]
16.6007 -18.69 0.0000203045 232 4 2 7 [+] picture button
Q1JQ25_DANRE ENSDART00000024869 LOC553441 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1JQ25]
16.7144 -22.6 0.0000278678 280 8 1 8 [+] picture button
hells ENSDART00000080465 hypothetical protein LOC553328 [Source:RefSeq_peptide;Acc:NP_001032178]
16.7999 -17.57 0.0000281044 410 10 2 16 [+] picture button
zgc:56412 ENSDART00000101740 hypothetical protein LOC406666 [Source:RefSeq_peptide;Acc:NP_998522]
16.052 -25.04 0.0000305827 700 5 3 7 [+] picture button
zgc:154082 ENSDART00000059506 hypothetical protein LOC777711 [Source:RefSeq_peptide;Acc:NP_001071227]
17.1034 -17.74 0.000031266 343 5 1 11 [+] picture button
LOC562032 ENSDART00000051166 Growth factor receptor-bound protein 10 (GRB10 adaptor protein) (Insulin receptor-binding protein GRB-IR). [Source:Uniprot/SWISSPROT;Acc:Q13322]Growth factor receptor-bound protein 10 (GRB10 adaptor protein) (Insulin receptor-binding protein GRB-IR). [Source:Uniprot/SWISSPROT;Acc:Q13322] BY ORTHOLOGY TO:SINFRUT00000169116
16.9612 -23.55 0.0000330606 700 7 4 14 [+] picture button
zgc:110197 ENSDART00000026059 hypothetical protein LOC550525 [Source:RefSeq_peptide;Acc:NP_001017827]
17.631 -19.08 0.0000341908 700 7 1 9 [+] picture button
gria1a ENSDART00000021437 AMPA receptor subunit GluR1A [Source:RefSeq_peptide;Acc:NP_991161]
17.5103 -21.63 0.0000375804 187 1 2 1 [+] picture button
dpp3 ENSDART00000011305 dipeptidylpeptidase 3 [Source:RefSeq_peptide;Acc:NP_001002683]
15.9253 -19.49 0.0000395671 560 4 1 4 [+] picture button
zgc:112097 ENSDART00000058160 Zgc:112097 protein. [Source:Uniprot/SPTREMBL;Acc:Q567E9]
16.0361 -21.63 0.0000404745 493 4 1 4 [+] picture button
zgc:112163 ENSDART00000004295 Uncharacterized protein C1orf74 homolog. [Source:Uniprot/SWISSPROT;Acc:Q567C3]
15.9185 -15.59 0.0000476277 138 3 3 7 [+] picture button
casp2 ENSDART00000089231 caspase 2, apoptosis-related cysteine protease [Source:RefSeq_peptide;Acc:NP_001036160]
15.8601 -16.1 0.0000501289 700 5 2 5 [+] picture button

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Download table: GFF TXT
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