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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-30e*

578 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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psme1 ENSDART00000005105 proteasome activator subunit 1 [Source:RefSeq_peptide;Acc:NP_571450]
18.0788 -13.96 1.27151e-05 180 5 1 9 [+] picture button
zgc:123265 ENSDART00000007783 hypothetical protein LOC641497 [Source:RefSeq_peptide;Acc:NP_001032513]
17.5103 -9.87 3.80947e-05 164 5 1 10 [+] picture button
gpr98 ENSDART00000008043 G-protein coupled receptor 98 precursor (Monogenic audiogenic seizure susceptibility protein 1 homolog) (Very large G-protein coupled receptor 1). [Source:Uniprot/SWISSPROT;Acc:Q6JAN0]
16.7144 -11.03 6.30091e-05 254 5 8 12 [+] picture button
zgc:153629 ENSDART00000030103 hypothetical protein LOC768289 [Source:RefSeq_peptide;Acc:NP_001070922]
18.0788 -15.48 0.00010814 176 5 1 4 [+] picture button
LOC562421 ENSDART00000103646 Potassium voltage-gated channel subfamily G member 2 (Voltage-gated potassium channel subunit Kv6.2) (Cardiac potassium channel subunit). [Source:Uniprot/SWISSPROT;Acc:Q9UJ96]Potassium voltage-gated channel subfamily G member 2 (Voltage-gated potassium channel subunit Kv6.2) (Cardiac potassium channel subunit). [Source:Uniprot/SWISSPROT;Acc:Q9UJ96] BY ORTHOLOGY TO:ENSMMUT00000048097
16.4274 -21.23 0.000127325 700 9 1 7 [+] picture button
zgc:86715 ENSDART00000044647 hypothetical protein LOC415236 [Source:RefSeq_peptide;Acc:NP_001002146]
16.3733 -11.13 0.00014453 69 3 2 4 [+] picture button
si:ch211-154h20.2 ENSDART00000100044 Novel protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1LYS9]
17.1328 -15.77 0.000156683 700 3 1 3 [+] picture button
upk1a ENSDART00000036302 uroplakin 1a [Source:RefSeq_peptide;Acc:NP_001035332]
16.8773 -21.13 0.000209435 1526 5 3 5 [+] picture button
zgc:165629 ENSDART00000065441 hypothetical protein LOC565958 [Source:RefSeq_peptide;Acc:NP_001092213]
16.5223 -9 0.000226731 700 4 1 4 [+] picture button
zgc:158748 ENSDART00000091647 hypothetical protein LOC791173 [Source:RefSeq_peptide;Acc:NP_001074124]
17.3966 -15.08 0.000361613 132 3 1 4 [+] picture button
ercc3 ENSDART00000013066 excision repair cross-complementing rodent repair deficiency, complementation group 3 [Source:RefSeq_peptide;Acc:NP_963876]
16.7144 -10.48 0.000411567 285 8 1 13 [+] picture button
ifi30 ENSDART00000078866 interferon gamma inducible protein 30 [Source:RefSeq_peptide;Acc:NP_001006057]
16.7144 -16.67 0.000430565 176 5 1 11 [+] picture button
wu:fc27e05 ENSDART00000027115 Wu:fc27e05 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6PHG7]
16.6388 -27.01 0.000443883 700 7 1 10 [+] picture button
zgc:77751 ENSDART00000016616 hypothetical protein LOC393819 [Source:RefSeq_peptide;Acc:NP_957140]
16.8787 -7.72 0.000508739 548 5 1 5 [+] picture button
zgc:152997 ENSDART00000055056 hypothetical protein LOC768176 [Source:RefSeq_peptide;Acc:NP_001070787]
16.6878 -16.03 0.000554264 700 4 1 5 [+] picture button
wdr18 ENSDART00000060251 WD repeat domain 18 [Source:RefSeq_peptide;Acc:NP_001005206]
18.2183 -16.19 0.000614714 313 8 1 15 [+] picture button
gamt ENSDART00000104360 Guanidinoacetate N-methyltransferase (EC 2.1.1.2). [Source:Uniprot/SWISSPROT;Acc:Q71N41]
16.6212 -24.74 0.00066414 700 6 1 6 [+] picture button
zgc:153047 ENSDART00000089849 hypothetical protein LOC767752 [Source:RefSeq_peptide;Acc:NP_001070188]
17.5103 -10.84 0.00067626 280 7 1 9 [+] picture button
prdx3 ENSDART00000101940 peroxiredoxin 3 [Source:RefSeq_peptide;Acc:NP_001013478]
18.0788 -16.43 0.00067626 200 6 1 9 [+] picture button
zgc:101594 ENSDART00000013666 hypothetical protein LOC447901 [Source:RefSeq_peptide;Acc:NP_001004639]
17.7091 -16.89 0.000678597 634 7 1 7 [+] picture button
WHDC1 ENSDART00000058859 WAS protein homology region 2 domain containing 1 [Source:RefSeq_peptide;Acc:NP_001073904]
16.4888 -21.32 0.00069553 700 5 2 6 [+] picture button
zgc:114168 ENSDART00000019831 Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase). [Source:Uniprot/SWISSPROT;Acc:Q4V8T0]
17.7377 -14.79 0.00069846 150 3 1 4 [+] picture button
si:ch211-165a16.3 ENSDART00000087935 Novel protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1LV34]
16.4248 -10.55 0.000717942 700 6 5 7 [+] picture button
tbxas1 ENSDART00000047555 thromboxane A synthase 1 [Source:RefSeq_peptide;Acc:NP_991172]
18.5126 -24.95 0.000718816 419 8 2 13 [+] picture button
raly ENSDART00000040503 RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse)) [Source:RefSeq_peptide;Acc:NP_991173]
16.4214 -20.18 0.000724382 373 7 1 10 [+] picture button
zgc:154151 ENSDART00000003192 hypothetical protein LOC777764 [Source:RefSeq_peptide;Acc:NP_001071270]
17.624 -12.08 0.000839233 288 11 1 12 [+] picture button
zgc:100846 ENSDART00000015127 hypothetical protein LOC402895 [Source:RefSeq_peptide;Acc:NP_991166]
16.7666 -14.9 0.000844146 769 8 1 10 [+] picture button
zgc:153726 ENSDART00000092787 hypothetical protein LOC777730 [Source:RefSeq_peptide;Acc:NP_001071245]
16.6007 -13.8 0.000849826 700 11 1 11 [+] picture button
zgc:100927 ENSDART00000064503 hypothetical protein LOC445239 [Source:RefSeq_peptide;Acc:NP_001003633]
17.6469 -16.23 0.000884421 449 6 1 10 [+] picture button
evlb ENSDART00000045815 Enah/Vasp-like b [Source:RefSeq_peptide;Acc:NP_991196]
16.6868 -21.2 0.000932795 670 9 1 11 [+] picture button
cdkn3 ENSDART00000057155 Cdkn3 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q7ZWJ8]
16.3733 -11.21 0.000946148 251 7 3 20 [+] picture button
zgc:103564 ENSDART00000055676 hypothetical protein LOC492461 [Source:RefSeq_peptide;Acc:NP_001007334]
16.8044 -12.58 0.0011166 409 7 1 13 [+] picture button
LOC100006163 ENSDART00000076056 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 (EC 3.6.1.-) (ATP-dependent RNA helicase DHX38) (DEAH box protein 38). [Source:Uniprot/SWISSPROT;Acc:Q92620]Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 (EC 3.6.1.-) (ATP-dependent RNA helicase DHX38) (DEAH box protein 38). [Source:Uniprot/SWISSPROT;Acc:Q92620] BY ORTHOLOGY TO:ENST00000268482
16.5654 -13.87 0.0011291 700 5 2 6 [+] picture button
itih2 ENSDART00000100815 inter-alpha (globulin) inhibitor H2 [Source:RefSeq_peptide;Acc:NP_998172]
17.2161 -15.34 0.00115816 700 4 1 3 [+] picture button
LOC561939 ENSDART00000012430 solute carrier family 25, member 23 [Source:RefSeq_peptide;Acc:NP_077008]solute carrier family 25, member 23 [Source:RefSeq_peptide;Acc:NP_077008] BY ORTHOLOGY TO:ENST00000264088
17.3218 -18.81 0.0011595 700 7 1 7 [+] picture button
si:ch211-220f20.1 ENSDART00000099362 Novel protein (Zgc:100824) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1L890]
18.0296 -21.42 0.00120433 700 3 1 2 [+] picture button
zgc:86754 ENSDART00000064961 hypothetical protein LOC415225 [Source:RefSeq_peptide;Acc:NP_001002135]
17.0555 -15.14 0.00128907 700 7 1 8 [+] picture button
zgc:66488 ENSDART00000101209 hypothetical protein LOC393403 [Source:RefSeq_peptide;Acc:NP_956725]
17.4852 -24.93 0.00132945 700 10 1 11 [+] picture button
cmtm4 ENSDART00000073745 CKLF-like MARVEL transmembrane domain containing 4 [Source:RefSeq_peptide;Acc:NP_001002492]
17.2237 -16.07 0.00140814 504 8 2 8 [+] picture button
si:dkey-110c1.6 ENSDART00000061617 high mobility group box domain containing isoform 1 [Source:RefSeq_peptide;Acc:NP_001018387]
17.3487 -21.9 0.0014623 547 10 1 14 [+] picture button
copz1 ENSDART00000011201 coatomer protein complex, subunit zeta 1 [Source:RefSeq_peptide;Acc:NP_571583]
18.0517 -18.84 0.00152359 410 7 2 18 [+] picture button
XR_030045.1 ENSDART00000013538 hypothetical protein LOC553467 (LOC553467), misc RNA [Source:RefSeq_dna;Acc:XR_030045]
17.7377 -13.19 0.00153667 234 9 1 11 [+] picture button
si:ch211-220f20.1 ENSDART00000028846 Novel protein (Zgc:100824) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1L890]
17.3126 -16.41 0.00156539 700 7 1 8 [+] picture button
zgc:85763 ENSDART00000014721 hypothetical protein LOC338247 [Source:RefSeq_peptide;Acc:NP_997953]
17.624 -14.56 0.00159521 293 4 1 5 [+] picture button
zgc:101704 ENSDART00000058960 hypothetical protein LOC492787 [Source:RefSeq_peptide;Acc:NP_001007429]
17.1571 -17.8 0.00163263 700 5 1 5 [+] picture button
ENSDART00000059926 NOT ANNOTATED
16.905 -14.18 0.00170866 700 6 1 6 [+] picture button
tnnt2 ENSDART00000102761 troponin T2, cardiac [Source:RefSeq_peptide;Acc:NP_690853]
17.2161 -17.26 0.00187689 700 5 1 5 [+] picture button
zgc:152744 ENSDART00000051864 hypothetical protein LOC767743 [Source:RefSeq_peptide;Acc:NP_001070180]
17.2071 -10.98 0.00190886 417 10 1 15 [+] picture button
zgc:66441 ENSDART00000015712 hypothetical protein LOC327348 [Source:RefSeq_peptide;Acc:NP_956086]
16.9418 -15.57 0.00197177 272 10 4 18 [+] picture button
zgc:153367 ENSDART00000104708 hypothetical protein LOC767657 [Source:RefSeq_peptide;Acc:NP_001070065]
17.5247 -17.23 0.00199897 535 10 1 13 [+] picture button

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Download table: GFF TXT
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