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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-30e

789 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
picture button picture button picture button picture button picture button picture button picture button picture button picture button picture button
melk ENSDART00000047728 maternal embryonic leucine zipper kinase [Source:RefSeq_peptide;Acc:NP_996771]
17.508 -10.4 3.31796e-08 318 8 7 14 [+] picture button
NP_001029093.1 ENSDART00000076974 hypothetical protein LOC569945 [Source:RefSeq_peptide;Acc:NP_001029093]
17.3276 -18.79 5.2207e-08 700 6 2 7 [+] picture button
sox3 ENSDART00000075617 Transcription factor Sox-3. [Source:Uniprot/SWISSPROT;Acc:Q6EJB7]
17.8384 -15.75 6.9473e-08 700 7 4 7 [+] picture button
DAGLA ENSDART00000091567 Sn1-specific diacylglycerol lipase alpha (EC 3.1.1.-) (DGL-alpha) (Neural stem cell-derived dendrite regulator). [Source:Uniprot/SWISSPROT;Acc:Q9Y4D2]
16.3469 -15.12 1.45802e-07 700 7 6 8 [+] picture button
dll4 ENSDART00000103320 delta-like 4 [Source:RefSeq_peptide;Acc:NP_001073304]
17.2523 -16.26 1.61718e-07 695 9 2 10 [+] picture button
LOC572113 ENSDART00000013257 hypothetical protein LOC535219 [Source:RefSeq_peptide;Acc:NP_001070377]hypothetical protein LOC535219 [Source:RefSeq_peptide;Acc:NP_001070377] BY ORTHOLOGY TO:ENSBTAT00000009388
17.3247 -14.31 2.16726e-07 700 3 14 7 [+] picture button
rmi1 ENSDART00000060657 RMI1, RecQ mediated genome instability 1, homolog [Source:RefSeq_peptide;Acc:NP_956474]
17.1692 -11.73 2.23826e-07 266 9 2 17 [+] picture button
lmbr1l ENSDART00000027224 Limb region 1 homolog-like protein. [Source:Uniprot/SWISSPROT;Acc:Q803C7]
16.7522 -12.57 2.68399e-07 625 6 1 9 [+] picture button
msxd ENSDART00000003441 Homeobox protein MSH-D. [Source:Uniprot/SWISSPROT;Acc:Q01704]
16.2197 -13.71 3.49554e-07 548 9 3 9 [+] picture button
zgc:113196 ENSDART00000006451 hypothetical protein LOC548335 [Source:RefSeq_peptide;Acc:NP_001017539]
17.3127 -17.39 7.3218e-07 1073 11 1 11 [+] picture button
zgc:92136 ENSDART00000034054 Nogo-B receptor precursor (NgBR) (Nuclear undecaprenyl pyrophosphate synthase 1 homolog). [Source:Uniprot/SWISSPROT;Acc:Q6DHR8]
17.0362 -13.31 8.24341e-07 303 7 1 10 [+] picture button
ROBO1 ENSDART00000097132 Roundabout homolog 1 precursor (H-Robo-1) (Deleted in U twenty twenty). [Source:Uniprot/SWISSPROT;Acc:Q9Y6N7]
17.2161 -17.62 1e-06 700 10 1 8 [+] picture button
Q1LY86_DANRE ENSDART00000092695 Novel protein similar to vertebrate junctional adhesion molecule 3 (JAM3) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1LY86]
16.905 -14.19 1e-06 700 12 1 5 [+] picture button
zgc:112011 ENSDART00000079928 hypothetical protein LOC553668 [Source:RefSeq_peptide;Acc:NP_001018477]
17.8948 -16.86 1.28746e-06 813 7 1 9 [+] picture button
NP_001038599.2 ENSDART00000086165 hypothetical protein LOC567503 [Source:RefSeq_peptide;Acc:NP_001038599]
16.2827 -12.42 1.71429e-06 700 4 5 4 [+] picture button
fvt1 ENSDART00000022621 3-ketodihydrosphingosine reductase [Source:RefSeq_peptide;Acc:NP_957433]
16.4548 -16.68 2.51831e-06 853 7 2 8 [+] picture button
zgc:86709 ENSDART00000080664 hypothetical protein LOC415156 [Source:RefSeq_peptide;Acc:NP_001002066]
19.2158 -16.87 2.70185e-06 222 6 10 10 [+] picture button
ung ENSDART00000062359 uracil-DNA glycosylase [Source:RefSeq_peptide;Acc:NP_957268]
17.1692 -12.15 4.63301e-06 276 10 3 15 [+] picture button
LOC570043 ENSDART00000059652 terminal deoxycytidyl transferase rev1terminal deoxycytidyl transferase rev1 BY ORTHOLOGY TO:AAEL002250-RA
16.7175 -17.35 4.84452e-06 700 11 3 15 [+] picture button
zcrb1 ENSDART00000067174 Zinc finger CCHC-type and RNA-binding motif-containing protein 1. [Source:Uniprot/SWISSPROT;Acc:Q5SP50]
16.2483 -8.27 5.64564e-06 321 5 4 7 [+] picture button
ppapdc1b ENSDART00000064603 phosphatidic acid phosphatase type 2 domain containing 1B [Source:RefSeq_peptide;Acc:NP_001002211]
16.2291 -8.22 7.24663e-06 353 11 2 17 [+] picture button
zgc:153892 ENSDART00000059035 hypothetical protein LOC777708 [Source:RefSeq_peptide;Acc:NP_001071224]
16.9193 -12.38 7.47886e-06 829 5 1 7 [+] picture button
si:dkey-164k19.1 ENSDART00000006423 Novel protein similar to vertebrate mannosidase, alpha, class 1A, member 1 (MAN1A1) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5RHM7]
16.779 -13.57 7.6274e-06 700 4 1 4 [+] picture button
NP_001017370.1 ENSDART00000055677 similar to RIKEN cDNA 8030451K01 (LOC387921), transcript variant 1, mRNA [Source:RefSeq_dna;Acc:NM_001012754]
18.1495 -20.49 7.72465e-06 700 6 2 5 [+] picture button
pqlc3 ENSDART00000076410 PQ loop repeat containing 3 [Source:RefSeq_peptide;Acc:NP_001004615]
17.1735 -16.19 8.44531e-06 578 10 1 19 [+] picture button
zgc:65956 ENSDART00000012938 phosphoglycerate dehydrogenase [Source:RefSeq_peptide;Acc:NP_955871]
16.487 -12.68 9.01036e-06 260 6 6 17 [+] picture button
ctsh ENSDART00000060245 cathepsin H [Source:RefSeq_peptide;Acc:NP_997853]
17.4971 -13.87 1.09108e-05 302 10 2 19 [+] picture button
A2BHH5_DANRE ENSDART00000082577 Novel protein. [Source:Uniprot/SPTREMBL;Acc:A2BHH5]
16.3562 -13.96 1.31029e-05 700 6 1 7 [+] picture button
ATRN ENSDART00000089533 Attractin precursor (Mahogany homolog) (DPPT-L). [Source:Uniprot/SWISSPROT;Acc:O75882]
17.7392 -16.32 1.4934e-05 700 7 2 7 [+] picture button
acat2 ENSDART00000006778 acetyl-CoA acetyltransferase 2 [Source:RefSeq_peptide;Acc:NP_571445]
17.0784 -15.26 1.71799e-05 673 12 1 17 [+] picture button
zgc:158350 ENSDART00000101535 hypothetical protein LOC569582 [Source:RefSeq_peptide;Acc:NP_001074462]
17.5288 -16.31 1.90952e-05 700 6 9 9 [+] picture button
zgc:153688 ENSDART00000092116 hypothetical protein LOC558373 [Source:RefSeq_peptide;Acc:NP_001070029]
16.6384 -7.82 2.07114e-05 444 10 1 19 [+] picture button
LOC799360 ENSDART00000064826 Putative helicase MOV-10 (EC 3.6.1.-) (Moloney leukemia virus 10 protein). [Source:Uniprot/SWISSPROT;Acc:Q9HCE1]Putative helicase MOV-10 (EC 3.6.1.-) (Moloney leukemia virus 10 protein). [Source:Uniprot/SWISSPROT;Acc:Q9HCE1] BY ORTHOLOGY TO:ENSMMUT00000021988
16.2827 -16.58 2.10355e-05 700 6 2 7 [+] picture button
LOC555552 ENSDART00000003097 ras homolog gene family, member U [Source:RefSeq_peptide;Acc:NP_067028]ras homolog gene family, member U [Source:RefSeq_peptide;Acc:NP_067028] BY ORTHOLOGY TO:SINFRUT00000156198
16.6976 -16.87 2.12328e-05 700 7 1 5 [+] picture button
zgc:110022 ENSDART00000065488 hypothetical protein LOC554131 [Source:RefSeq_peptide;Acc:NP_001019597]
16.5017 -11.83 2.14357e-05 532 8 1 12 [+] picture button
C1orf184 ENSDART00000061596 UPF0351 protein C1orf184. [Source:Uniprot/SWISSPROT;Acc:Q5VVY1]
17.029 -9.15 3.07281e-05 700 3 3 3 [+] picture button
znf593 ENSDART00000082237 zinc finger protein 593 [Source:RefSeq_peptide;Acc:NP_957111]
17.0087 -21.16 3.07818e-05 700 6 1 7 [+] picture button
zgc:152969 ENSDART00000015103 hypothetical protein LOC777758 [Source:RefSeq_peptide;Acc:NP_001071267]
18.5336 -12.8 3.1728e-05 208 7 3 11 [+] picture button
Q6NSN0_DANRE ENSDART00000020434 LOC553209 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6NSN0]
16.2938 -16.83 3.82835e-05 1412 5 1 5 [+] picture button
zgc:110460 ENSDART00000065317 Eukaryotic translation initiation factor 2A (eIF-2A). [Source:Uniprot/SWISSPROT;Acc:Q4QRJ7]
16.516 -8.72 3.89857e-05 700 4 2 4 [+] picture button
pxk ENSDART00000092104 PX domain containing serine/threonine kinase [Source:RefSeq_peptide;Acc:NP_001076277]
16.4283 -14.14 4.20202e-05 700 5 2 6 [+] picture button
LOC100006679 ENSDART00000101479 Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box protein HAGE) (Helical antigen). [Source:Uniprot/SWISSPROT;Acc:Q9NXZ2]Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box protein HAGE) (Helical antigen). [Source:Uniprot/SWISSPROT;Acc:Q9NXZ2] BY ORTHOLOGY TO:ENSBTAT00000029077
17.4785 -17.78 4.34793e-05 700 8 1 11 [+] picture button
si:rp71-1p14.5 ENSDART00000065556 Novel protein similar to humna DNA-directed polymerase theta (POLQ) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6ZM94]
16.3864 -13.79 4.90433e-05 700 4 1 6 [+] picture button
clic1 ENSDART00000081810 chloride intracellular channel 1 (clic1), mRNA [Source:RefSeq_dna;Acc:NM_212682]
16.5098 -15.68 4.995e-05 700 8 1 10 [+] picture button
zgc:103502 ENSDART00000037455 hypothetical protein LOC449996 [Source:RefSeq_peptide;Acc:NP_001006017]
16.8281 -16.38 5.54827e-05 258 6 4 6 [+] picture button
taf5l ENSDART00000032552 TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:RefSeq_peptide;Acc:NP_956146]
17.5103 -10.82 5.63712e-05 105 3 4 7 [+] picture button
eef2k ENSDART00000052001 elongation factor-2 kinase [Source:RefSeq_peptide;Acc:NP_001002740]
16.5596 -12.31 5.69514e-05 574 7 2 10 [+] picture button
LOC100003487 ENSDART00000105251 F-box only protein 34. [Source:Uniprot/SWISSPROT;Acc:Q9NWN3]F-box only protein 34. [Source:Uniprot/SWISSPROT;Acc:Q9NWN3] BY ORTHOLOGY TO:ENST00000313833
16.3144 -14.1 6.21105e-05 700 6 1 6 [+] picture button
chn1 ENSDART00000103117 chimerin (chimaerin) 1 (chn1), mRNA [Source:RefSeq_dna;Acc:NM_213000]
16.7215 -17.62 6.21291e-05 700 6 2 6 [+] picture button
ccnf ENSDART00000043144 cyclin F [Source:RefSeq_peptide;Acc:NP_996931]
16.4135 -12.31 6.31571e-05 1001 7 1 9 [+] picture button

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Download table: GFF TXT
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