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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-29a

943 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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si:dkey-6a5.1 ENSDART00000026593 glutamate receptor interacting protein 1 [Source:RefSeq_peptide;Acc:NP_001038316]
15.6605 -16.65 1.49618e-09 700 5 11 6 [+] picture button
zgc:153818 ENSDART00000082471 hypothetical protein LOC556677 [Source:RefSeq_peptide;Acc:NP_001034446]
15.8292 -17.58 9.99724e-09 1206 2 1 2 [+] picture button
LOC567119 ENSDART00000090803 fem-1 homolog b [Source:RefSeq_peptide;Acc:NP_056137]fem-1 homolog b [Source:RefSeq_peptide;Acc:NP_056137] BY ORTHOLOGY TO:ENST00000306917
17.4152 -21.57 1.25157e-08 700 6 7 6 [+] picture button
sol ENSDART00000059448 solo [Source:RefSeq_peptide;Acc:NP_878301]
16.1137 -17.87 1.52961e-08 933 7 4 6 [+] picture button
XR_029782.1 ENSDART00000081730 similar to DNA polymerase zeta catalytic subunit (LOC569100), mRNA [Source:RefSeq_dna;Acc:XR_029782]
15.6862 -15.6 1.65594e-08 700 5 4 8 [+] picture button
zgc:152701 ENSDART00000036277 hypothetical protein LOC568877 [Source:RefSeq_peptide;Acc:NP_001034447]
15.5528 -13.85 1.79166e-08 700 5 7 5 [+] picture button
MAD2L1BP ENSDART00000004779 MAD2L1-binding protein (Caught by MAD2 protein). [Source:Uniprot/SWISSPROT;Acc:Q15013]
17.3668 -17.99 3.83458e-08 700 9 1 9 [+] picture button
has3 ENSDART00000079817 hyaluronan synthase 3 [Source:RefSeq_peptide;Acc:NP_775327]
17.2161 -22.47 7.19999e-08 700 11 1 15 [+] picture button
sppl2 ENSDART00000029801 signal peptide peptidase-like 2 isoform 1 [Source:RefSeq_peptide;Acc:NP_001015067]
15.47 -13.5 1.46056e-07 1120 5 3 5 [+] picture button
bach2 ENSDART00000028717 Novel protein similar to human and mouse BTB and CNC homology 1, basic leucine zipper transcription factor 2 (BACH2) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5RIW6]
17.6325 -18.74 1.53955e-07 700 8 8 8 [+] picture button
zgc:112335 ENSDART00000024135 hypothetical protein LOC554127 [Source:RefSeq_peptide;Acc:NP_001019593]
16.6007 -18.15 2.41838e-07 240 7 8 20 [+] picture button
fign ENSDART00000023105 Fidgetin. [Source:Uniprot/SWISSPROT;Acc:Q503S1]
16.0799 -16.98 2.77854e-07 699 3 10 5 [+] picture button
TNFAIP3 ENSDART00000102859 Tumor necrosis factor, alpha-induced protein 3 (EC 3.-.-.-) (Putative DNA-binding protein A20) (Zinc finger protein A20). [Source:Uniprot/SWISSPROT;Acc:P21580]
15.5479 -16.98 3.08488e-07 700 3 1 3 [+] picture button
hsp47 ENSDART00000035096 heat shock protein 47 [Source:RefSeq_peptide;Acc:NP_571279]
17.2287 -18.21 5.90753e-07 595 9 3 17 [+] picture button
zgc:110619 ENSDART00000045245 hypothetical protein LOC322113 [Source:RefSeq_peptide;Acc:NP_001018304]
15.6669 -14.53 9.11669e-07 1330 4 1 4 [+] picture button
A2CEY2_DANRE ENSDART00000082364 Novel zinc finger protein. [Source:Uniprot/SPTREMBL;Acc:A2CEY2]
16.6976 -20.81 1e-06 700 12 1 2 [+] picture button
zgc:56622 ENSDART00000042775 hypothetical protein LOC326033 [Source:RefSeq_peptide;Acc:NP_956031]
15.2464 -15.55 1e-06 700 16 1 4 [+] picture button
ENSDART00000024131 NOT ANNOTATED
16.8013 -19 1e-06 700 17 1 2 [+] picture button
A2CEY2_DANRE ENSDART00000074776 Novel zinc finger protein. [Source:Uniprot/SPTREMBL;Acc:A2CEY2]
16.6976 -20.81 1e-06 700 14 1 4 [+] picture button
LOC566626 ENSDART00000053622 RING finger protein 139 (Translocation in renal carcinoma on chromosome 8). [Source:Uniprot/SWISSPROT;Acc:Q8WU17]RING finger protein 139 (Translocation in renal carcinoma on chromosome 8). [Source:Uniprot/SWISSPROT;Acc:Q8WU17] BY ORTHOLOGY TO:ENST00000303545
16.905 -20.42 1e-06 700 15 1 4 [+] picture button
ENSDART00000099971 NOT ANNOTATED
16.8013 -19 1e-06 700 17 1 2 [+] picture button
sh3px3 ENSDART00000009971 SH3 and PX domain-containing 3-like protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:A4KUQ7]
16.8261 -26.15 1e-06 1802 9 1 2 [+] picture button
fam91a1 ENSDART00000019459 Protein FAM91A1. [Source:Uniprot/SWISSPROT;Acc:Q6TEP1]
16.0953 -23.94 1.10996e-06 1268 4 1 4 [+] picture button
caprin2 ENSDART00000040708 Novel protein similar to human C1q domain containing 1 (C1QDC1). [Source:Uniprot/SPTREMBL;Acc:Q5RJ80]
15.4115 -17.16 2.69308e-06 700 13 1 21 [+] picture button
zgc:153980 ENSDART00000088928 hypothetical protein LOC561051 [Source:RefSeq_peptide;Acc:NP_001070037]
16.0704 -18.56 2.97085e-06 1204 5 1 5 [+] picture button
zgc:63849 ENSDART00000020908 hypothetical protein LOC323487 [Source:RefSeq_peptide;Acc:NP_955936]
15.9293 -16.38 3.02846e-06 867 4 1 5 [+] picture button
zgc:110615 ENSDART00000009411 Protein BUD31 homolog (Protein G10 homolog). [Source:Uniprot/SWISSPROT;Acc:Q567Z7]
15.5773 -11.38 3.09861e-06 184 4 3 7 [+] picture button
zgc:110528 ENSDART00000025198 Protein FAM119A. [Source:Uniprot/SWISSPROT;Acc:Q5BLD8]
17.9651 -22.45 4.31926e-06 240 8 2 17 [+] picture button
A4IGC6_DANRE ENSDART00000103737 Hypothetical protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:A4IGC6]
15.7877 -16.62 4.5699e-06 700 8 2 9 [+] picture button
pik3r1 ENSDART00000056213 Hypothetical protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:A4QN75]
16.17 -22.11 5.15121e-06 2360 2 1 2 [+] picture button
uros ENSDART00000054094 uroporphyrinogen III synthase [Source:RefSeq_peptide;Acc:NP_997993]
15.6826 -17.04 5.4443e-06 389 8 4 11 [+] picture button
dnmt8 ENSDART00000100320 DNA (cytosine-5-)-methyltransferase 8 [Source:RefSeq_peptide;Acc:NP_001018144]
17.395 -19.5 5.53381e-06 318 7 3 14 [+] picture button
LOC798803 ENSDART00000058537 Fibrillin-1 precursor. [Source:Uniprot/SWISSPROT;Acc:P35555]Fibrillin-1 precursor. [Source:Uniprot/SWISSPROT;Acc:P35555] BY ORTHOLOGY TO:ENSORLT00000003277
17.3198 -17.75 5.98585e-06 700 14 6 11 [+] picture button
bckdha ENSDART00000059347 branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:RefSeq_peptide;Acc:NP_001019590]
16.8514 -16.94 6.71339e-06 459 6 2 13 [+] picture button
znf598 ENSDART00000074757 Zinc finger protein 598. [Source:Uniprot/SWISSPROT;Acc:Q6PFK1]
15.5388 -13.27 7.26172e-06 455 9 1 10 [+] picture button
zgc:77831 ENSDART00000035560 Transmembrane protein 38A. [Source:Uniprot/SWISSPROT;Acc:Q6P2T0]
16.5939 -17.4 8.0152e-06 700 3 1 4 [+] picture button
ptc2 ENSDART00000007640 Patched-2 protein. [Source:Uniprot/SPTREMBL;Acc:Q9W6T6]
15.453 -11.42 8.523e-06 700 4 2 4 [+] picture button
zgc:56363 ENSDART00000101093 hypothetical protein LOC394103 [Source:RefSeq_peptide;Acc:NP_957422]
15.5567 -12.81 9.29917e-06 700 7 1 7 [+] picture button
aicda ENSDART00000016834 activation-induced cytidine deaminase [Source:RefSeq_peptide;Acc:NP_001008403]
17.9651 -17.97 9.51167e-06 192 8 2 16 [+] picture button
taf5 ENSDART00000015007 TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:RefSeq_peptide;Acc:NP_001032508]
15.8945 -13.9 9.84141e-06 399 6 1 7 [+] picture button
fabp3 ENSDART00000033724 fatty acid binding protein 3, muscle and heart [Source:RefSeq_peptide;Acc:NP_694493]
16.9418 -13.19 9.9305e-06 226 5 2 13 [+] picture button
LOC794305 ENSDART00000029964 Proprotein convertase PACE4 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9PT85]Proprotein convertase PACE4 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9PT85] BY ORTHOLOGY TO:ENSGALT00000011615
15.9716 -15.89 1.23636e-05 700 5 1 3 [+] picture button
Q502G7_DANRE ENSDART00000082084 LOC553462 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q502G7]
17.0321 -16.16 1.30454e-05 383 7 1 9 [+] picture button
GRHL1 ENSDART00000087454 Grainyhead-like protein 1 homolog (Transcription factor CP2-like 2) (Transcription factor LBP-32) (NH32) (Mammalian grainyhead). [Source:Uniprot/SWISSPROT;Acc:Q9NZI5]
17.9635 -20.05 1.335e-05 700 9 1 13 [+] picture button
LOC797250 ENSDART00000073595 Large neutral amino acids transporter small subunit 1 (L-type amino acid transporter 1) (4F2 light chain) (4F2 LC) (4F2LC) (Integral membrane protein E16) (TA1 protein). [Source:Uniprot/SWISSPROT;Acc:Q63016]Large neutral amino acids transporter small subunit 1 (L-type amino acid transporter 1) (4F2 light chain) (4F2 LC) (4F2LC) (Integral membrane protein E16) (TA1 protein). [Source:Uniprot/SWISSPROT;Acc:Q63016] BY ORTHOLOGY TO:ENSRNOT00000025784
15.8535 -13.2 1.64147e-05 700 6 1 8 [+] picture button
zgc:92878 ENSDART00000056037 hypothetical protein LOC436749 [Source:RefSeq_peptide;Acc:NP_001002476]
15.7642 -14.37 1.69774e-05 700 4 1 4 [+] picture button
sms ENSDART00000007205 spermine synthase [Source:RefSeq_peptide;Acc:NP_571831]
16.288 -20.25 1.80987e-05 809 7 1 7 [+] picture button
LOC569455 ENSDART00000058876 Karyopherin 3 CG1059-PA [Source:RefSeq_peptide;Acc:NP_524226]Karyopherin 3 CG1059-PA [Source:RefSeq_peptide;Acc:NP_524226] BY ORTHOLOGY TO:CG1059-RA
15.4426 -20.8 1.88064e-05 700 7 1 7 [+] picture button
KLHDC3 ENSDART00000055123 Kelch domain-containing protein 3 (Protein Peas) (Testis intracellular mediator protein). [Source:Uniprot/SWISSPROT;Acc:Q9BQ90]
15.3506 -21.6 2.64764e-05 700 6 2 8 [+] picture button
NP_001076285.2 ENSDART00000026162 hypothetical protein LOC558291 [Source:RefSeq_peptide;Acc:NP_001076285]
15.9931 -15.82 3.01273e-05 700 4 2 7 [+] picture button

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Download table: GFF TXT
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