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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-27d

764 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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PDE3B ENSDART00000089640 cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B) (CGIPDE1) (CGIP1). [Source:Uniprot/SWISSPROT;Acc:Q13370]
17.8692 -22.55 0.0000000000261536 700 7 11 8 [+] picture button
zgc:92802 ENSDART00000057612 hypothetical protein LOC436796 [Source:RefSeq_peptide;Acc:NP_001002523]
18.1925 -17.51 0.0000000633436 190 4 3 6 [+] picture button
isl1 ENSDART00000010896 Insulin gene enhancer protein isl-1 (Islet-1). [Source:Uniprot/SWISSPROT;Acc:P53405]
16.2713 -15.48 0.000000403334 1027 4 11 4 [+] picture button
LOC566014 ENSDART00000083537 RIKEN cDNA 1300010M03 gene [Source:MarkerSymbol;Acc:MGI:1915248]RIKEN cDNA 1300010M03 gene [Source:MarkerSymbol;Acc:MGI:1915248] BY ORTHOLOGY TO:ENSMUST00000017946
16.0945 -16.02 0.000000473513 700 4 5 7 [+] picture button
eya1 ENSDART00000012253 eyes absent homolog 1 [Source:RefSeq_peptide;Acc:NP_571268]
16.487 -10.63 0.000000490753 133 9 1 5 [+] picture button
LOC564436 ENSDART00000085253 Midline 1 (Opitz/BBB syndrome). [Source:Uniprot/SPTREMBL;Acc:Q6DEU6]Midline 1 (Opitz/BBB syndrome). [Source:Uniprot/SPTREMBL;Acc:Q6DEU6] BY ORTHOLOGY TO:ENSXETT00000034265
17.8384 -14.78 0.000001 700 6 1 4 [+] picture button
LOC558892 ENSDART00000074244 NOT ANNOTATED
17.3431 -11.76 0.000001 700 14 1 8 [+] picture button
LOC794963 ENSDART00000054069 UPF0184 protein C9orf16 (EST00098). [Source:Uniprot/SWISSPROT;Acc:Q9BUW7]UPF0184 protein C9orf16 (EST00098). [Source:Uniprot/SWISSPROT;Acc:Q9BUW7] BY ORTHOLOGY TO:ENSORLT00000008831
17.0169 -15.58 0.000001 700 13 1 12 [+] picture button
SAMD10 ENSDART00000083158 Sterile alpha motif domain-containing protein 10. [Source:Uniprot/SWISSPROT;Acc:Q9BYL1]
15.987 -17.17 0.00000131543 700 9 2 10 [+] picture button
zgc:123269 ENSDART00000061196 hypothetical protein LOC571995 [Source:RefSeq_peptide;Acc:NP_001032794]
16.6618 -18.31 0.00000147855 700 7 7 9 [+] picture button
dvl2 ENSDART00000012450 dishevelled 2, dsh homolog [Source:RefSeq_peptide;Acc:NP_997813]
17.7377 -12.38 0.00000256729 278 9 5 15 [+] picture button
shmt1 ENSDART00000074737 serine hydroxymethyltransferase 1 (soluble) [Source:RefSeq_peptide;Acc:NP_957340]
16.0322 -13.78 0.00000514569 268 8 1 13 [+] picture button
zgc:158611 ENSDART00000084009 hypothetical protein LOC100009636 [Source:RefSeq_peptide;Acc:NP_001076474]
17.1692 -14.76 0.00000563074 134 5 4 12 [+] picture button
tomm22 ENSDART00000066388 translocase of outer mitochondrial membrane 22 homolog [Source:RefSeq_peptide;Acc:NP_001001724]
17.1509 -16.31 0.00000593324 685 6 2 6 [+] picture button
LOC566239 ENSDART00000083657 solute carrier family 35, member F3 [Source:RefSeq_peptide;Acc:NP_775779]solute carrier family 35, member F3 [Source:RefSeq_peptide;Acc:NP_775779] BY ORTHOLOGY TO:SINFRUT00000148235
16.01 -15.29 0.00000644145 700 4 1 4 [+] picture button
zgc:92723 ENSDART00000019053 hypothetical protein LOC436856 [Source:RefSeq_peptide;Acc:NP_001002583]
16.5296 -12.65 0.00000696164 349 6 2 10 [+] picture button
zgc:153233 ENSDART00000085716 Myotubularin-related protein 10. [Source:Uniprot/SWISSPROT;Acc:A0JMF6]
16.0322 -17.56 0.00000760318 156 5 2 10 [+] picture button
fzd3l ENSDART00000081616 frizzled homolog 3-like (fzd3l), mRNA [Source:RefSeq_dna;Acc:NM_001080601]
16.3175 -21.62 0.00000766539 700 5 1 9 [+] picture button
ubr5 ENSDART00000035761 similar to E3 ubiquitin protein ligase, HECT domain containing, 1, (LOC100007900), partial mRNA [Source:RefSeq_dna;Acc:XR_030106]
16.0037 -18.27 0.0000093335 700 5 4 7 [+] picture button
XR_029337.1 ENSDART00000030811 hypothetical LOC564291 (LOC564291), mRNA [Source:RefSeq_dna;Acc:XR_029337]
16.8858 -22.84 0.0000148154 700 6 1 10 [+] picture button
SMURF2 ENSDART00000055491 E3 ubiquitin-protein ligase SMURF2 (EC 6.3.2.-) (Smad ubiquitination regulatory factor 2) (Smad-specific E3 ubiquitin ligase 2) (hSMURF2). [Source:Uniprot/SWISSPROT;Acc:Q9HAU4]
16.0089 -18.68 0.0000163345 700 9 10 10 [+] picture button
si:ch211-180b22.4 ENSDART00000074328 Novel protein similar to vertebrate dual specificity phosphatase 10 (DUSP10) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5SP01]
16.179 -15.15 0.0000199325 700 6 3 7 [+] picture button
crsp7 ENSDART00000003801 cofactor required for Sp1 transcriptional activation, subunit 7 [Source:RefSeq_peptide;Acc:NP_998224]
17.7009 -17.61 0.0000201435 383 10 9 19 [+] picture button
A2BGM6_DANRE ENSDART00000089014 Novel myosin head motor domain containing protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:A2BGM6]
16.9838 -19.52 0.0000285508 700 4 2 6 [+] picture button
c1galt1c1 ENSDART00000052789 C1GALT1-specific chaperone 1 [Source:RefSeq_peptide;Acc:NP_955961]
17.1692 -16.91 0.0000289445 201 4 3 11 [+] picture button
LOC100006533 ENSDART00000097873 Calcium and integrin-binding protein 3 (Kinase-interacting protein 3) (KIP 3). [Source:Uniprot/SWISSPROT;Acc:Q96Q77]Calcium and integrin-binding protein 3 (Kinase-interacting protein 3) (KIP 3). [Source:Uniprot/SWISSPROT;Acc:Q96Q77] BY ORTHOLOGY TO:ENSMODT00000018967
16.8494 -16.55 0.0000299551 700 11 3 10 [+] picture button
tpr ENSDART00000017941 nuclear pore complex-associated protein TPR [Source:RefSeq_peptide;Acc:NP_001025294]
16.2783 -15.1 0.0000349474 700 5 2 7 [+] picture button
zgc:110823 ENSDART00000033761 hypothetical protein LOC548343 [Source:RefSeq_peptide;Acc:NP_001017547]
17.7066 -18.04 0.000035291 700 11 2 14 [+] picture button
LOC560913 ENSDART00000048191 MP2K7_HUMAN Isoform 2 of O14733 - Homo sapiens (Human) [Source:Uniprot/Varsplic;Acc:O14733-2]MP2K7_HUMAN Isoform 2 of O14733 - Homo sapiens (Human) [Source:Uniprot/Varsplic;Acc:O14733-2] BY ORTHOLOGY TO:ENST00000322554
17.4522 -19.77 0.0000377486 700 5 2 9 [+] picture button
LOC563979 ENSDART00000045684 Porcupine homolog. [Source:Uniprot/SPTREMBL;Acc:Q6P2X7]Porcupine homolog. [Source:Uniprot/SPTREMBL;Acc:Q6P2X7] BY ORTHOLOGY TO:ENSXETT00000017366
17.2161 -21.15 0.0000421344 700 6 2 9 [+] picture button
zgc:112049 ENSDART00000054337 hypothetical protein LOC555274 [Source:RefSeq_peptide;Acc:NP_001029346]
16.1112 -13.92 0.0000517074 737 6 2 8 [+] picture button
npepl1 ENSDART00000024578 aminopeptidase-like 1 [Source:RefSeq_peptide;Acc:NP_001017688]
16.8597 -19.04 0.0000616394 700 9 3 8 [+] picture button
si:dkey-185l3.3 ENSDART00000007688 organic cation transporter like [Source:RefSeq_peptide;Acc:NP_001020659]
16.0595 -10.83 0.0000646371 700 2 1 2 [+] picture button
gata1 ENSDART00000013714 GATA-binding protein 1 [Source:RefSeq_peptide;Acc:NP_571309]
18.458 -19.54 0.000064769 311 7 1 14 [+] picture button
grhpr ENSDART00000098640 glyoxylate reductase/hydroxypyruvate reductase [Source:RefSeq_peptide;Acc:NP_001018361]
17.1692 -13.31 0.0000656457 270 6 3 9 [+] picture button
LOC565671 ENSDART00000013449 Carbohydrate sulfotransferase 13 (EC 2.8.2.5) (Chondroitin 4-O- sulfotransferase 3) (Chondroitin 4-sulfotransferase 3) (C4ST3) (C4ST- 3). [Source:Uniprot/SWISSPROT;Acc:Q8NET6]Carbohydrate sulfotransferase 13 (EC 2.8.2.5) (Chondroitin 4-O- sulfotransferase 3) (Chondroitin 4-sulfotransferase 3) (C4ST3) (C4ST- 3). [Source:Uniprot/SWISSPROT;Acc:Q8NET6] BY ORTHOLOGY TO:ENSCAFT00000006228
17.3198 -17.95 0.0000743821 700 8 2 11 [+] picture button
XR_028981.1 ENSDART00000059376 hypothetical LOC557121 (LOC557121), mRNA [Source:RefSeq_dna;Acc:XR_028981]
15.9716 -17.92 0.0000750306 700 5 1 7 [+] picture button
DEAF1 ENSDART00000093225 Deformed epidermal autoregulatory factor 1 homolog (Nuclear DEAF-1- related transcriptional regulator) (NUDR) (Suppressin) (Zinc finger MYND domain-containing protein 5). [Source:Uniprot/SWISSPROT;Acc:O75398]
18.0788 -16.55 0.0000784347 700 8 3 10 [+] picture button
zgc:162229 ENSDART00000097654 hypothetical protein LOC100037370 [Source:RefSeq_peptide;Acc:NP_001082991]
17.5258 -16.14 0.0000802047 700 3 1 4 [+] picture button
bad ENSDART00000077219 BCL2-antagonist of cell death [Source:RefSeq_peptide;Acc:NP_571654]
17.0316 -17.83 0.0000841799 700 9 2 12 [+] picture button
fnbp1l ENSDART00000045038 formin binding protein 1-like [Source:RefSeq_peptide;Acc:NP_001003634]
16.7144 -16.78 0.0000966218 247 6 2 10 [+] picture button
LOC556658 ENSDART00000087297 NOT ANNOTATED
17.1124 -18.2 0.0000977404 700 4 1 9 [+] picture button
nek2 ENSDART00000003248 NIMA (never in mitosis gene a)-related kinase 2 [Source:RefSeq_peptide;Acc:NP_957344]
16.9924 -22.72 0.000104368 451 7 2 17 [+] picture button
rpl37 ENSDART00000045284 ribosomal protein L37 [Source:RefSeq_peptide;Acc:NP_001002069]
17.2367 -23.84 0.000104618 700 4 1 2 [+] picture button
si:ch211-244p18.3 ENSDART00000103336 hypothetical protein LOC566768 [Source:RefSeq_peptide;Acc:NP_001038584]
17.6573 -22.13 0.000110341 700 7 2 8 [+] picture button
zgc:91802 ENSDART00000014865 hypothetical protein LOC449542 [Source:RefSeq_peptide;Acc:NP_001005584]
15.9933 -13.49 0.000115544 700 4 1 5 [+] picture button
apaf1 ENSDART00000019165 Apoptotic protease-activating factor 1 (Apaf-1). [Source:Uniprot/SWISSPROT;Acc:Q9I9H8]
17.9651 -16.31 0.000123647 136 3 3 4 [+] picture button
mef2c ENSDART00000039551 Mef2c protein. [Source:Uniprot/SPTREMBL;Acc:Q6NSN7]
16.4901 -18.93 0.000129536 700 9 1 5 [+] picture button
mef2c ENSDART00000027392 Mef2c protein. [Source:Uniprot/SPTREMBL;Acc:Q6NSN7]
16.4901 -18.93 0.000129536 700 10 1 6 [+] picture button
c10orf119 ENSDART00000077655 hypothetical protein LOC321119 [Source:RefSeq_peptide;Acc:NP_997743]
16.2596 -22.83 0.000132369 302 8 2 17 [+] picture button

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Download table: GFF TXT
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