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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-24

794 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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ubtf ENSDART00000048725 Novel protein similar to human upstream binding transcription factor, RNA polymerase I (UBTF) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8JFU0]
17.4235 -27.07 1.27462e-06 700 8 3 8 [+] picture button
stard3 ENSDART00000003634 StAR-related lipid transfer protein 3 (StARD3) (START domain- containing protein 3) (MLN64-like protein). [Source:Uniprot/SWISSPROT;Acc:Q9DFS4]
16.4436 -25.78 2.09065e-06 975 6 1 7 [+] picture button
lmo1 ENSDART00000044208 LIM domain only 1 [Source:RefSeq_peptide;Acc:NP_775326]
17.4056 -28.88 4.6729e-06 726 6 6 7 [+] picture button
polr1a ENSDART00000044708 Polr1a protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q7SXQ2]
17.1746 -22.6 5.31022e-06 700 8 1 7 [+] picture button
tshz1 ENSDART00000024639 Serologically defined colon cancer antigen 33. [Source:Uniprot/SPTREMBL;Acc:Q1LX15]
16.4438 -26.45 7.58893e-06 1198 9 12 9 [+] picture button
si:dkey-218n20.1 ENSDART00000088427 hypothetical protein LOC563800 [Source:RefSeq_peptide;Acc:NP_001038491]
17.1354 -24.37 8.22685e-06 700 9 1 9 [+] picture button
zgc:76887 ENSDART00000014124 hypothetical protein LOC405816 [Source:RefSeq_peptide;Acc:NP_998045]
16.2665 -18.7 8.56553e-06 753 7 4 8 [+] picture button
mcrs1 ENSDART00000002545 microspherule protein 1 [Source:RefSeq_peptide;Acc:NP_998438]
15.6622 -15.1 1.00946e-05 656 7 2 7 [+] picture button
ENSDART00000093224 Immunoglobulin superfamily member 8 precursor (CD81 partner 3) (Glu- Trp-Ile EWI motif-containing protein 2) (EWI-2) (Keratinocytes- associated transmembrane protein 4) (KCT-4) (LIR-D1) (CD316 antigen). [Source:Uniprot/SWISSPROT;Acc:Q969P0]Immunoglobulin superfamily member 8 precursor (CD81 partner 3) (Glu- Trp-Ile EWI motif-containing protein 2) (EWI-2) (Keratinocytes- associated transmembrane protein 4) (KCT-4) (LIR-D1) (CD316 antigen). [Source:Uniprot/SWISSPROT;Acc:Q969P0] BY ORTHOLOGY TO:ENSXETT00000027185
16.3393 -24.63 1.17244e-05 700 6 1 4 [+] picture button
traf3ip1 ENSDART00000007189 TNF receptor-associated factor 3 interacting protein 1 [Source:RefSeq_peptide;Acc:NP_956894]
16.3733 -18.92 1.27421e-05 230 6 2 13 [+] picture button
zgc:77177 ENSDART00000037279 hypothetical protein LOC406577 [Source:RefSeq_peptide;Acc:NP_998453]
16.0124 -27.5 1.49692e-05 700 10 1 11 [+] picture button
rap2c ENSDART00000014095 RAP2C, member of RAS oncogene family [Source:RefSeq_peptide;Acc:NP_001007056]
16.4134 -23.2 1.51602e-05 741 5 1 7 [+] picture button
zgc:110608 ENSDART00000045518 hypothetical protein LOC550595 [Source:RefSeq_peptide;Acc:NP_001017896]
15.923 -20.89 1.55423e-05 700 6 1 7 [+] picture button
si:ch211-193k19.1 ENSDART00000051723 Novel protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1L9B7]
15.6605 -17.02 2.06425e-05 700 8 2 7 [+] picture button
zgc:73369 ENSDART00000066697 hypothetical protein LOC393780 [Source:RefSeq_peptide;Acc:NP_957101]
17.624 -24.58 3.03654e-05 212 3 2 4 [+] picture button
zgc:136669 ENSDART00000063675 hypothetical protein LOC678640 [Source:RefSeq_peptide;Acc:NP_001035475]
15.4636 -16.95 3.06252e-05 272 6 1 11 [+] picture button
rcc1 ENSDART00000054026 regulator of chromosome condensation 1 [Source:RefSeq_peptide;Acc:NP_998343]
18.1955 -26.07 3.32313e-05 580 9 2 11 [+] picture button
snx17 ENSDART00000040191 Sorting nexin-17. [Source:Uniprot/SWISSPROT;Acc:Q5RID7]
15.6791 -24.38 5.27138e-05 700 3 1 3 [+] picture button
si:dkey-209e8.1 ENSDART00000082715 Novel protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1LY94]
15.3676 -19.27 5.3291e-05 700 5 1 5 [+] picture button
LOC569177 ENSDART00000091124 F20D6.11 [Source:RefSeq_peptide;Acc:NP_505112]F20D6.11 [Source:RefSeq_peptide;Acc:NP_505112] BY ORTHOLOGY TO:F20D6.11.2
16.2628 -19.46 5.58051e-05 700 6 1 8 [+] picture button
slc13a2 ENSDART00000075958 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 [Source:RefSeq_peptide;Acc:NP_998617]
17.3752 -26.71 6.02037e-05 644 7 1 8 [+] picture button
zgc:154176 ENSDART00000105878 hypothetical protein LOC768160 [Source:RefSeq_peptide;Acc:NP_001070771]
16.6042 -15.57 6.36569e-05 417 7 1 12 [+] picture button
cygb1 ENSDART00000055794 Cytoglobin-1. [Source:Uniprot/SWISSPROT;Acc:Q8UUR3]
15.3516 -18.28 6.92849e-05 700 5 1 8 [+] picture button
LOC569455 ENSDART00000058876 Karyopherin 3 CG1059-PA [Source:RefSeq_peptide;Acc:NP_524226]Karyopherin 3 CG1059-PA [Source:RefSeq_peptide;Acc:NP_524226] BY ORTHOLOGY TO:CG1059-RA
15.6527 -18.8 7.5696e-05 700 7 1 7 [+] picture button
si:ch211-10e8.6 ENSDART00000103776 Haloacid dehalogenase-like hydrolase domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q7T012]
15.2383 -23.75 8.0884e-05 416 10 3 14 [+] picture button
UBE1L ENSDART00000087080 Ubiquitin-activating enzyme E1 homolog (D8). [Source:Uniprot/SWISSPROT;Acc:P41226]
16.1287 -20.15 8.14673e-05 700 4 1 4 [+] picture button
zgc:158843 ENSDART00000091229 hypothetical protein LOC791205 [Source:RefSeq_peptide;Acc:NP_001074156]
15.3602 -13.09 8.49999e-05 436 11 3 13 [+] picture button
LOC799228 ENSDART00000050941 NOT ANNOTATED
15.7642 -18.22 8.97487e-05 700 17 1 5 [+] picture button
zgc:110660 ENSDART00000077166 hypothetical protein LOC550575 [Source:RefSeq_peptide;Acc:NP_001017877]
16.2827 -29.6 9.6209e-05 700 7 2 9 [+] picture button
timm23 ENSDART00000105523 Mitochondrial import inner membrane translocase subunit Tim23. [Source:Uniprot/SWISSPROT;Acc:Q7T2P6]
16.8595 -19.48 0.000100188 397 6 2 9 [+] picture button
si:rp71-69p9.2 ENSDART00000090946 Novel protein similar to human ankyrin repeat and MYND domain containing 1 (ANKMY1) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1LXM4]
15.2995 -14.9 0.000104165 700 4 3 7 [+] picture button
zgc:152964 ENSDART00000092921 hypothetical protein LOC768303 [Source:RefSeq_peptide;Acc:NP_001070934]
15.5567 -23.92 0.000111634 700 4 1 4 [+] picture button
zgc:158391 ENSDART00000084579 hypothetical protein LOC563746 [Source:RefSeq_peptide;Acc:NP_001073654]
16.7816 -23.44 0.000134638 700 9 1 12 [+] picture button
ccr9 ENSDART00000077511 LOC553366 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q568F5]
19.1194 -25.33 0.000163231 619 7 1 9 [+] picture button
si:ch211-238c15.1 ENSDART00000006078 lysyl oxidase-like 1 [Source:RefSeq_peptide;Acc:NP_001036790]
16.3733 -24.94 0.000173728 144 7 2 10 [+] picture button
tsg101 ENSDART00000031814 hypothetical protein LOC415179 [Source:RefSeq_peptide;Acc:NP_001002089]
15.2886 -20.58 0.000181594 431 9 1 12 [+] picture button
LOC563758 ENSDART00000086976 Protein APCDD1 precursor (Adenomatosis polyposis coli down-regulated 1 protein). [Source:Uniprot/SWISSPROT;Acc:Q8J025]Protein APCDD1 precursor (Adenomatosis polyposis coli down-regulated 1 protein). [Source:Uniprot/SWISSPROT;Acc:Q8J025] BY ORTHOLOGY TO:ENSGACT00000022052
15.8679 -22.53 0.000184382 700 7 2 7 [+] picture button
furina ENSDART00000091468 furinA [Source:RefSeq_peptide;Acc:NP_001038571]
17.5103 -19.35 0.000188282 230 6 2 16 [+] picture button
spop ENSDART00000016612 Speckle-type POZ protein (HIB homolog 1) (SPOP1). [Source:Uniprot/SWISSPROT;Acc:Q7T330]
15.8845 -19.56 0.000189054 861 6 1 6 [+] picture button
ruvbl2 ENSDART00000078018 RuvB-like 2 (EC 3.6.1.-) (Reptin) (zReptin). [Source:Uniprot/SWISSPROT;Acc:P83571]
17.7377 -20.35 0.000189374 274 4 1 7 [+] picture button
selt1a ENSDART00000081214 selenoprotein T, 1a (selt1a), mRNA [Source:RefSeq_dna;Acc:NM_178290]
18.0458 -27.69 0.00018989 700 2 1 2 [+] picture button
LOC568916 ENSDART00000085565 Calpain-15 (EC 3.4.22.-) (Small optic lobes homolog). [Source:Uniprot/SWISSPROT;Acc:O75808]Calpain-15 (EC 3.4.22.-) (Small optic lobes homolog). [Source:Uniprot/SWISSPROT;Acc:O75808] BY ORTHOLOGY TO:ENSMODT00000036053
17.5456 -25.45 0.000230823 700 5 1 9 [+] picture button
exoc7 ENSDART00000078332 exocyst complex component 7 [Source:RefSeq_peptide;Acc:NP_998579]
15.7642 -18.6 0.000234356 700 2 1 2 [+] picture button
rab4a ENSDART00000004420 Ras-related protein Rab-4A. [Source:Uniprot/SWISSPROT;Acc:Q6PHI9]
16.1116 -19.22 0.000242888 921 5 1 5 [+] picture button
LOC562421 ENSDART00000103646 Potassium voltage-gated channel subfamily G member 2 (Voltage-gated potassium channel subunit Kv6.2) (Cardiac potassium channel subunit). [Source:Uniprot/SWISSPROT;Acc:Q9UJ96]Potassium voltage-gated channel subfamily G member 2 (Voltage-gated potassium channel subunit Kv6.2) (Cardiac potassium channel subunit). [Source:Uniprot/SWISSPROT;Acc:Q9UJ96] BY ORTHOLOGY TO:ENSMMUT00000048097
16.0089 -15.82 0.000246794 700 9 1 7 [+] picture button
zgc:56248 ENSDART00000027957 hypothetical protein LOC394190 [Source:RefSeq_peptide;Acc:NP_957509]
15.7296 -23.63 0.000255466 922 3 1 3 [+] picture button
wu:fb22a03 ENSDART00000045144 Wu:fb22a03 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q498W9]
15.941 -16.87 0.000270949 638 6 2 8 [+] picture button
zgc:92148 ENSDART00000019417 hypothetical protein LOC436626 [Source:RefSeq_peptide;Acc:NP_001002353]
17.3966 -18.22 0.0002929 274 5 1 8 [+] picture button
zgc:63910 ENSDART00000040998 Mitochondrial 18 kDa protein (MTP18). [Source:Uniprot/SWISSPROT;Acc:Q6PCS6]
16.8726 -20.7 0.000313817 700 10 1 22 [+] picture button
hsp90ab1 ENSDART00000020084 Heat shock protein HSP 90-beta. [Source:Uniprot/SWISSPROT;Acc:O57521]
16.8736 -23.52 0.000335936 394 10 1 15 [+] picture button

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Download table: GFF TXT
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