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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-22b

929 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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pdss1 ENSDART00000040865 hypothetical protein LOC550349 [Source:RefSeq_peptide;Acc:NP_001017656]
16.7564 -18.86 9.80898e-08 351 7 7 11 [+] picture button
smap1 ENSDART00000079806 hypothetical protein LOC777731 [Source:RefSeq_peptide;Acc:NP_001071246]
16.4462 -21.06 9.82633e-07 925 4 2 4 [+] picture button
LOC569977 ENSDART00000100798 Thyroid receptor-interacting protein 6 (TRIP-6) (OPA-interacting protein 1) (Zyxin-related protein 1) (ZRP-1). [Source:Uniprot/SWISSPROT;Acc:Q15654]Thyroid receptor-interacting protein 6 (TRIP-6) (OPA-interacting protein 1) (Zyxin-related protein 1) (ZRP-1). [Source:Uniprot/SWISSPROT;Acc:Q15654] BY ORTHOLOGY TO:ENSORLT00000008337
15.7642 -19.7 1.38551e-06 700 6 3 5 [+] picture button
si:ch211-152m4.1 ENSDART00000067251 Novel protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5RGF9]
15.2456 -14.79 1.76094e-06 700 7 2 8 [+] picture button
sephs1 ENSDART00000081143 selenophosphate synthetase [Source:RefSeq_peptide;Acc:NP_955995]
16.1401 -16.07 4.91449e-06 820 3 1 3 [+] picture button
ttc35 ENSDART00000023238 tetratricopeptide repeat domain 35 [Source:RefSeq_peptide;Acc:NP_998709]
15.9678 -16.88 7.11499e-06 700 7 4 8 [+] picture button
zgc:110789 ENSDART00000074361 hypothetical protein LOC503757 [Source:RefSeq_peptide;Acc:NP_001013353]
15.7489 -14.75 8.5319e-06 399 7 2 10 [+] picture button
gfpt1 ENSDART00000080135 glutamine-fructose-6-phosphate transaminase 1 [Source:RefSeq_peptide;Acc:NP_001030153]
15.4214 -16.78 9.34206e-06 700 5 2 8 [+] picture button
zgc:112973 ENSDART00000074426 hypothetical protein LOC563276 [Source:RefSeq_peptide;Acc:NP_001025345]
16.1459 -17.03 1.56347e-05 243 6 2 6 [+] picture button
LOC563478 ENSDART00000079538 RIKEN cDNA 1700041C02 gene [Source:MarkerSymbol;Acc:MGI:1920582]RIKEN cDNA 1700041C02 gene [Source:MarkerSymbol;Acc:MGI:1920582] BY ORTHOLOGY TO:ENSMUST00000063642
15.783 -19.25 2.33301e-05 700 9 1 10 [+] picture button
mcoln2 ENSDART00000023960 mucolipin 2 [Source:RefSeq_peptide;Acc:NP_957442]
15.3499 -16.97 2.34864e-05 247 8 5 16 [+] picture button
sepn1 ENSDART00000034263 selenoprotein N, 1 (sepn1), mRNA [Source:RefSeq_dna;Acc:NM_001004294]
15.8427 -19.58 2.3585e-05 859 3 1 4 [+] picture button
NP_060219.2 (2 of 2) ENSDART00000058333 CDNA FLJ20294 fis, clone HEP05851. [Source:Uniprot/SPTREMBL;Acc:Q9NXE7]
17.3602 -20.31 2.4061e-05 700 8 1 8 [+] picture button
tspan15 ENSDART00000057641 tetraspanin 15 [Source:RefSeq_peptide;Acc:NP_001017773]
15.2349 -16.81 3.16367e-05 700 11 5 13 [+] picture button
smo ENSDART00000005985 smoothened homolog [Source:RefSeq_peptide;Acc:NP_571102]
15.0382 -17 3.20131e-05 700 8 2 12 [+] picture button
zgc:103600 ENSDART00000024768 hypothetical protein LOC492516 [Source:RefSeq_peptide;Acc:NP_001007389]
16.7144 -15.52 3.48619e-05 106 5 2 8 [+] picture button
calrl2 ENSDART00000048316 calreticulin, like 2 [Source:RefSeq_peptide;Acc:NP_956007]
17.0984 -23.62 3.69591e-05 700 10 2 10 [+] picture button
A2BGL3_DANRE ENSDART00000088639 Novel protein. [Source:Uniprot/SPTREMBL;Acc:A2BGL3]
15.1993 -22.46 3.94474e-05 700 8 1 9 [+] picture button
zgc:85866 ENSDART00000036631 cysteine rich protein 61 [Source:RefSeq_peptide;Acc:NP_001001826]
15.5916 -24 4.60976e-05 1324 8 6 8 [+] picture button
nola2 ENSDART00000101037 H/ACA ribonucleoprotein complex subunit 2-like protein (Nucleolar protein family A member 2-like protein). [Source:Uniprot/SWISSPROT;Acc:Q6PBV6]
16.0658 -13.26 5.0787e-05 367 7 5 11 [+] picture button
pptc7 ENSDART00000015214 PTC7 protein phosphatase homolog [Source:RefSeq_peptide;Acc:NP_001007379]
16.4853 -22.14 5.68256e-05 339 6 4 9 [+] picture button
zgc:153539 ENSDART00000085684 hypothetical protein LOC558156 [Source:RefSeq_peptide;Acc:NP_001070843]
18.5336 -23.31 6.03612e-05 85 2 1 2 [+] picture button
zgc:153295 ENSDART00000104999 hypothetical protein LOC751667 [Source:RefSeq_peptide;Acc:NP_001038849]
16.6748 -16.56 6.32997e-05 489 6 2 5 [+] picture button
A2BGT0_DANRE ENSDART00000079402 Novel protein similar to mouse ubiquitin specific protease 30 (Usp30). [Source:Uniprot/SPTREMBL;Acc:A2BGT0]
15.1329 -20.32 6.36364e-05 700 3 1 3 [+] picture button
MAP2K5 ENSDART00000052404 Dual specificity mitogen-activated protein kinase kinase 5 (EC 2.7.12.2) (MAP kinase kinase 5) (MAPKK 5) (MAPK/ERK kinase 5). [Source:Uniprot/SWISSPROT;Acc:Q13163]
15.2661 -19.45 6.37253e-05 700 12 3 15 [+] picture button
emx2 ENSDART00000058036 empty spiracles homeobox 2 [Source:RefSeq_peptide;Acc:NP_571355]
16.9534 -22.51 7.05249e-05 660 8 8 12 [+] picture button
ddx27 ENSDART00000032804 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:RefSeq_peptide;Acc:NP_001002869]
15.2456 -16.27 7.08343e-05 700 5 3 5 [+] picture button
si:dkey-218n20.1 ENSDART00000088427 hypothetical protein LOC563800 [Source:RefSeq_peptide;Acc:NP_001038491]
16.4085 -19.09 7.55884e-05 700 9 1 9 [+] picture button
zgc:55340 ENSDART00000058057 hypothetical protein LOC321738 [Source:RefSeq_peptide;Acc:NP_955859]
14.9072 -14.61 7.6165e-05 700 7 1 9 [+] picture button
tspan7b ENSDART00000002691 tetraspanin 7b [Source:RefSeq_peptide;Acc:NP_001005581]
15.1419 -14.62 7.62678e-05 700 6 1 4 [+] picture button
si:dkey-1b17.9 ENSDART00000106541 Novel protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1LVU0]
16.4901 -23.38 8.06987e-05 700 5 1 4 [+] picture button
zgc:114119 ENSDART00000098999 hypothetical protein LOC619273 [Source:RefSeq_peptide;Acc:NP_001028926]
16.2293 -21.21 8.0887e-05 415 12 2 21 [+] picture button
LOC567831 ENSDART00000078828 Ankyrin repeat and SAM domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q6ZW76]Ankyrin repeat and SAM domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q6ZW76] BY ORTHOLOGY TO:ENST00000304283
14.9345 -13.86 8.35338e-05 700 5 1 6 [+] picture button
LOC556897 ENSDART00000090586 BTB/POZ domain-containing protein 6 (Lens BTB domain protein). [Source:Uniprot/SWISSPROT;Acc:Q96KE9]BTB/POZ domain-containing protein 6 (Lens BTB domain protein). [Source:Uniprot/SWISSPROT;Acc:Q96KE9] BY ORTHOLOGY TO:ENSORLT00000022759
16.7305 -21.46 0.00010099 700 7 1 6 [+] picture button
cog2 ENSDART00000026189 component of oligomeric golgi complex 2 [Source:RefSeq_peptide;Acc:NP_998519]
15.732 -19.02 0.00011804 598 3 1 3 [+] picture button
A5D6U5_DANRE ENSDART00000103449 Hypothetical protein. [Source:Uniprot/SPTREMBL;Acc:A5D6U5]
15.16 -16.69 0.000128233 700 5 2 4 [+] picture button
CCL20 ENSDART00000105771 Small inducible cytokine A20 precursor (CCL20) (Macrophage inflammatory protein 3 alpha) (MIP-3-alpha) (Liver and activation- regulated chemokine) (CC chemokine LARC) (Beta chemokine exodus-1) [Contains: CCL20(1-67); CCL20(1-64); CCL20(2-70)]. [Source:Uniprot/SWISSPROT;Acc:P78556]
17.3694 -20.23 0.000128896 700 3 1 3 [+] picture button
ENSDART00000054223 NOT ANNOTATED
15.5567 -23.48 0.000138181 700 6 1 4 [+] picture button
zgc:76986 ENSDART00000067164 hypothetical protein LOC405811 [Source:RefSeq_peptide;Acc:NP_998040]
16.5267 -19.19 0.000140718 700 6 2 11 [+] picture button
ncl1 ENSDART00000081801 Nicalin-1 precursor (Nicastrin-like protein 1). [Source:Uniprot/SWISSPROT;Acc:Q6NZ07]
16.7027 -24.79 0.000145325 741 7 2 8 [+] picture button
NP_001012252.1 ENSDART00000053661 XK-related protein 7a [Source:RefSeq_peptide;Acc:NP_001012252]
14.8951 -12.73 0.000148033 278 9 1 14 [+] picture button
LOC100003105 ENSDART00000098330 C-type natriuretic peptide 4 precursor. [Source:Uniprot/SWISSPROT;Acc:Q800I7]C-type natriuretic peptide 4 precursor. [Source:Uniprot/SWISSPROT;Acc:Q800I7] BY ORTHOLOGY TO:ENSORLT00000008806
17.5273 -15.53 0.000157232 700 5 1 4 [+] picture button
zgc:92638 ENSDART00000024743 hypothetical protein LOC436711 [Source:RefSeq_peptide;Acc:NP_001002438]
15.1595 -20.75 0.000159749 700 6 6 6 [+] picture button
ccng2 ENSDART00000020603 cyclin G2 [Source:RefSeq_peptide;Acc:NP_998337]
16.0969 -17.49 0.000179174 743 7 1 9 [+] picture button
zgc:112236 ENSDART00000102226 hypothetical protein LOC553693 [Source:RefSeq_peptide;Acc:NP_001018503]
17.3827 -20.35 0.000233026 337 6 1 8 [+] picture button
ints10 ENSDART00000063170 Integrator complex subunit 10 (Int10). [Source:Uniprot/SWISSPROT;Acc:Q6TNU3]
18.1925 -17.49 0.000251605 256 10 2 18 [+] picture button
txnl1 ENSDART00000006419 thioredoxin-like 1 [Source:RefSeq_peptide;Acc:NP_957432]
15.4004 -17.21 0.000258237 700 4 1 5 [+] picture button
PAQR9 ENSDART00000073814 Progestin and adipoQ receptor family member 9 (Progestin and adipoQ receptor family member IX). [Source:Uniprot/SWISSPROT;Acc:Q6ZVX9]
15.8679 -19.45 0.000273394 700 3 1 6 [+] picture button
zgc:101761 ENSDART00000097790 hypothetical protein LOC493613 [Source:RefSeq_peptide;Acc:NP_001007774]
16.3043 -18.88 0.000303438 700 7 1 5 [+] picture button
A2BGM8_DANRE ENSDART00000088968 Novel protein similar to ubiquitin protein ligase E3B (UBE3B). [Source:Uniprot/SPTREMBL;Acc:A2BGM8]
15.453 -18.05 0.000308652 700 8 1 10 [+] picture button

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Download table: GFF TXT
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