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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-20a

841 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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DOCK4 ENSDART00000087817 Dedicator of cytokinesis protein 4. [Source:Uniprot/SWISSPROT;Acc:Q8N1I0]
17.963 -18.19 1.19436e-10 700 5 5 9 [+] picture button
LOC559017 ENSDART00000057211 Rho guanine nucleotide exchange factor 4 (APC-stimulated guanine nucleotide exchange factor) (Asef). [Source:Uniprot/SWISSPROT;Acc:Q9NR80]Rho guanine nucleotide exchange factor 4 (APC-stimulated guanine nucleotide exchange factor) (Asef). [Source:Uniprot/SWISSPROT;Acc:Q9NR80] BY ORTHOLOGY TO:ENSPTRT00000023127
16.5177 -18.36 2.45466e-09 700 6 3 11 [+] picture button
LOC562150 ENSDART00000046913 AT-rich interactive domain-containing protein 4B (ARID domain- containing protein 4B) (Histone deacetylase complex subunit SAP180) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Retinoblastoma-binding protein 1-like 1) (Breast c [Source:Uniprot/SWISSPROT;Acc:Q4LE39]AT-rich interactive domain-containing protein 4B (ARID domain- containing protein 4B) (Histone deacetylase complex subunit SAP180) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Retinoblastoma-binding protein 1-like 1) (Breast c [Source:Uniprot/SWISSPROT;Acc:Q4LE39] BY ORTHOLOGY TO:ENSORLT00000015668
17.2824 -18.18 2.79167e-09 700 6 1 14 [+] picture button
wee1 ENSDART00000060963 wee1 [Source:RefSeq_peptide;Acc:NP_001005770]
16.3998 -18.38 5.43826e-09 1018 4 3 6 [+] picture button
zgc:101644 ENSDART00000007914 hypothetical protein LOC494100 [Source:RefSeq_peptide;Acc:NP_001008643]
18.0313 -18.43 8.37416e-08 433 10 2 15 [+] picture button
NP_001073649.1 ENSDART00000077389 zinc finger protein 148 [Source:RefSeq_peptide;Acc:NP_001073649]
16.651 -17.56 1.60976e-07 610 12 11 20 [+] picture button
mtnr1ar ENSDART00000054674 Melatonin receptor type 1A Z1.7 (MEL-1A-R) (Fragment). [Source:Uniprot/SWISSPROT;Acc:P51046]
17.2786 -16.62 2.77062e-07 524 7 4 15 [+] picture button
zgc:110621 ENSDART00000039165 hypothetical protein LOC554088 [Source:RefSeq_peptide;Acc:NP_001019561]
17.6407 -15.41 6.49954e-07 380 12 7 27 [+] picture button
LOC558364 ENSDART00000054187 NOT ANNOTATED
16.9562 -19.03 1e-06 700 6 1 11 [+] picture button
LOC558364 ENSDART00000054189 NOT ANNOTATED
16.8986 -19.03 1e-06 700 7 1 12 [+] picture button
Q1MT39_DANRE ENSDART00000085685 Novel protein similar to vertebratesirtuin (Silent mating type information regulation 2 homolog) 7 (S. cerevisiae) (SIRT7) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1MT39]
17.2634 -16.06 1.35086e-06 700 5 2 8 [+] picture button
zgc:112157 ENSDART00000016800 Zinc finger protein 367. [Source:Uniprot/SWISSPROT;Acc:Q567C6]
17.196 -15.7 1.49941e-06 294 4 5 13 [+] picture button
zgc:56429 ENSDART00000097310 hypothetical protein LOC393247 [Source:RefSeq_peptide;Acc:NP_956571]
16.4612 -12.66 4.23253e-06 700 5 1 8 [+] picture button
MARCH8 ENSDART00000090430 E3 ubiquitin-protein ligase MARCH8 (EC 6.3.2.-) (Membrane-associated RING finger protein 8) (Membrane-associated RING-CH protein VIII) (MARCH-VIII) (RING finger protein 178) (Cellular modulator of immune recognition) (c-MIR). [Source:Uniprot/SWISSPROT;Acc:Q5T0T0]
17.8598 -20.27 4.28199e-06 700 4 2 9 [+] picture button
A2BG43_DANRE ENSDART00000088904 Novel protein similar to vertebrate glycolipid transfer protein (GLTP). [Source:Uniprot/SPTREMBL;Acc:A2BG43]
16.768 -13.45 4.42335e-06 700 6 1 7 [+] picture button
ccnb2 ENSDART00000052541 cyclin B2 [Source:RefSeq_peptide;Acc:NP_955462]
17.3091 -16.4 4.43471e-06 247 7 3 16 [+] picture button
NP_001006079.1 ENSDART00000020270 hypothetical protein LOC450059 [Source:RefSeq_peptide;Acc:NP_001006079]
16.5953 -16.51 4.92334e-06 669 9 4 13 [+] picture button
si:ch211-198b3.2 ENSDART00000014163 Novel protein similar to vertebrate fibronectin type III domain containing 1 (FNDC1) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5SPC4]
17.16 -15.17 5.03528e-06 700 7 4 11 [+] picture button
zgc:162267 ENSDART00000073399 hypothetical protein LOC100037371 [Source:RefSeq_peptide;Acc:NP_001082992]
18.4404 -18.9 5.75112e-06 145 5 6 21 [+] picture button
zgc:113200 ENSDART00000022634 hypothetical protein LOC503759 [Source:RefSeq_peptide;Acc:NP_001013355]
17.4222 -14.72 6.22638e-06 297 5 2 13 [+] picture button
sc4mol ENSDART00000078277 C-4 methylsterol oxidase (EC 1.14.13.72) (Methylsterol monooxygenase). [Source:Uniprot/SWISSPROT;Acc:Q7ZW77]
18.1904 -15.58 7.37899e-06 615 3 1 8 [+] picture button
si:ch73-264b7.2 ENSDART00000105675 TPR repeat-containing protein C18orf17 homolog. [Source:Uniprot/SWISSPROT;Acc:Q1LXE6]
16.5177 -21.36 7.60314e-06 700 5 7 9 [+] picture button
si:dkey-27p7.2 ENSDART00000026152 hypothetical protein LOC570669 [Source:RefSeq_peptide;Acc:NP_001038672]
16.6209 -15.9 9.09725e-06 700 9 3 13 [+] picture button
zgc:92629 ENSDART00000054153 Density-regulated protein (DRP). [Source:Uniprot/SWISSPROT;Acc:Q6DH65]
16.549 -17.35 1.00751e-05 700 5 5 7 [+] picture button
zgc:65979 ENSDART00000032344 Nucleoporin NUP53 (Nuclear pore complex protein Nup53) (Nucleoporin Nup35) (35 kDa nucleoporin). [Source:Uniprot/SWISSPROT;Acc:Q6P6X9]
16.3096 -15.18 1.46651e-05 678 3 1 4 [+] picture button
zgc:101624 ENSDART00000082251 hypothetical protein LOC450071 [Source:RefSeq_peptide;Acc:NP_001006091]
18.7102 -14.37 1.78328e-05 345 8 2 18 [+] picture button
sfpq ENSDART00000017359 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) [Source:RefSeq_peptide;Acc:NP_998443]
16.2942 -10.71 1.88906e-05 386 8 4 11 [+] picture button
PDZD3 (1 of 2) ENSDART00000078049 PDZ domain-containing protein 3 (PDZ domain-containing protein 2) (Intestinal and kidney-enriched PDZ protein). [Source:Uniprot/SWISSPROT;Acc:Q86UT5]
16.2492 -17.02 1.96368e-05 700 4 1 7 [+] picture button
zgc:112535 ENSDART00000013682 hypothetical protein LOC541329 [Source:RefSeq_peptide;Acc:NP_001013475]
16.7866 -17.57 2.22482e-05 445 7 3 14 [+] picture button
zgc:154082 ENSDART00000059506 hypothetical protein LOC777711 [Source:RefSeq_peptide;Acc:NP_001071227]
17.914 -12.27 2.25691e-05 343 5 1 11 [+] picture button
USP46 ENSDART00000066678 Ubiquitin carboxyl-terminal hydrolase 46 (EC 3.1.2.15) (Ubiquitin thioesterase 46) (Ubiquitin-specific-processing protease 46) (Deubiquitinating enzyme 46). [Source:Uniprot/SWISSPROT;Acc:P62068]
18.1767 -26.84 2.49702e-05 700 4 1 8 [+] picture button
cdkn3 ENSDART00000057155 Cdkn3 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q7ZWJ8]
19.1192 -22.02 2.9465e-05 251 7 3 20 [+] picture button
zgc:153260 ENSDART00000103220 hypothetical protein LOC751643 [Source:RefSeq_peptide;Acc:NP_001038827]
16.9697 -10.66 3.97455e-05 228 12 2 15 [+] picture button
zgc:63557 ENSDART00000056634 hypothetical protein LOC393978 [Source:RefSeq_peptide;Acc:NP_957297]
17.1176 -15.47 4.2472e-05 594 1 4 5 [+] picture button
LOC559841 ENSDART00000048814 EH-domain containing 1. [Source:Uniprot/SPTREMBL;Acc:Q641Z6]EH-domain containing 1. [Source:Uniprot/SPTREMBL;Acc:Q641Z6] BY ORTHOLOGY TO:ENSRNOT00000028547
16.4145 -18.42 4.40963e-05 700 3 1 7 [+] picture button
si:dkey-246a16.3 ENSDART00000090334 hypothetical protein LOC567457 [Source:RefSeq_peptide;Acc:NP_001038598]
16.9533 -16.17 4.51892e-05 700 4 1 11 [+] picture button
zgc:55420 ENSDART00000038657 hypothetical protein LOC406828 [Source:RefSeq_peptide;Acc:NP_998672]
16.6734 -15.05 4.73566e-05 700 8 1 10 [+] picture button
rel ENSDART00000077612 v-rel reticuloendotheliosis viral oncogene homolog [Source:RefSeq_peptide;Acc:NP_001001841]
16.9697 -12.66 4.95461e-05 269 6 1 11 [+] picture button
socs6l ENSDART00000012990 suppressor of cytokine signaling 6, like [Source:RefSeq_peptide;Acc:NP_955919]
16.5994 -21.14 5.29203e-05 958 2 1 2 [+] picture button
LOC562580 ENSDART00000041054 leukocyte receptor cluster (LRC) member 1 [Source:MarkerSymbol;Acc:MGI:1917007]leukocyte receptor cluster (LRC) member 1 [Source:MarkerSymbol;Acc:MGI:1917007] BY ORTHOLOGY TO:ENSMUST00000038743
17.5501 -18.6 5.65772e-05 700 4 3 9 [+] picture button
tgfbr2 ENSDART00000039832 transforming growth factor, beta receptor II [Source:RefSeq_peptide;Acc:NP_878275]
16.6109 -13.11 6.53416e-05 443 10 4 11 [+] picture button
fads2 ENSDART00000023278 Delta(5)/Delta(6) fatty acid desaturase (EC 1.14.19.-) (Delta-5/Delta- 6 fatty acid desaturase). [Source:Uniprot/SWISSPROT;Acc:Q9DEX7]
17.3258 -22.8 6.57102e-05 472 4 1 11 [+] picture button
LOC100007152 ENSDART00000089410 Serine/threonine-protein kinase ULK2 (EC 2.7.11.1) (Unc-51-like kinase 2). [Source:Uniprot/SWISSPROT;Acc:Q8IYT8]Serine/threonine-protein kinase ULK2 (EC 2.7.11.1) (Unc-51-like kinase 2). [Source:Uniprot/SWISSPROT;Acc:Q8IYT8] BY ORTHOLOGY TO:ENSBTAT00000029701
16.6557 -14.86 6.70147e-05 700 7 4 9 [+] picture button
SLC19A2 ENSDART00000083305 Thiamine transporter 1 (ThTr-1) (ThTr1) (Thiamine carrier 1) (TC1) (Solute carrier family 19 member 2). [Source:Uniprot/SWISSPROT;Acc:O60779]
16.4161 -23.06 6.79902e-05 700 10 3 13 [+] picture button
LOC100004341 ENSDART00000074399 calcium/calmodulin-dependent protein kinase II inhibitor 1 [Source:RefSeq_peptide;Acc:NP_061054]calcium/calmodulin-dependent protein kinase II inhibitor 1 [Source:RefSeq_peptide;Acc:NP_061054] BY ORTHOLOGY TO:ENSGACT00000010326
19.1501 -26.61 6.8206e-05 700 7 3 13 [+] picture button
invs ENSDART00000015688 Inversin. [Source:Uniprot/SWISSPROT;Acc:Q8UVC1]
16.9647 -16.53 6.93445e-05 482 10 2 15 [+] picture button
LOC571024 ENSDART00000057039 Transcription initiation factor TFIID subunit 4B (Transcription initiation factor TFIID 105 kDa subunit) (TAFII-105) (TAFII105). [Source:Uniprot/SWISSPROT;Acc:Q92750]Transcription initiation factor TFIID subunit 4B (Transcription initiation factor TFIID 105 kDa subunit) (TAFII-105) (TAFII105). [Source:Uniprot/SWISSPROT;Acc:Q92750] BY ORTHOLOGY TO:SINFRUT00000178319
16.2968 -13.59 7.00394e-05 700 6 1 7 [+] picture button
itm2c ENSDART00000098018 hypothetical protein LOC335863 [Source:RefSeq_peptide;Acc:NP_956274]
16.9845 -16.78 7.0646e-05 700 6 6 12 [+] picture button
NP_001030144.1 ENSDART00000015449 hypothetical protein LOC556956 [Source:RefSeq_peptide;Acc:NP_001030144]
17.7776 -18.07 7.46827e-05 700 9 2 15 [+] picture button
LOC557682 ENSDART00000013894 DCN1, defective in cullin neddylation 1, domain containing 3 [Source:RefSeq_peptide;Acc:NP_775746]DCN1, defective in cullin neddylation 1, domain containing 3 [Source:RefSeq_peptide;Acc:NP_775746] BY ORTHOLOGY TO:ENST00000324344
16.2525 -11.29 7.76248e-05 700 7 1 11 [+] picture button

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Download table: GFF TXT
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