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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-18c

744 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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zgc:154043 ENSDART00000053576 hypothetical protein LOC768136 [Source:RefSeq_peptide;Acc:NP_001070750]
18.4224 -15.72 1.28591e-10 415 12 3 21 [+] picture button
zgc:110621 ENSDART00000039165 hypothetical protein LOC554088 [Source:RefSeq_peptide;Acc:NP_001019561]
16.6132 -15.98 1.6335e-08 380 12 7 27 [+] picture button
smad2 ENSDART00000044756 Mothers against decapentaplegic homolog 2 (SMAD 2) (Mothers against DPP homolog 2) (Smad2). [Source:Uniprot/SWISSPROT;Acc:Q9I9P9]
17.0555 -15.03 3.13699e-08 258 3 1 8 [+] picture button
RUNX1 ENSDART00000055968 Runt-related transcription factor 1 (Core-binding factor, alpha 2 subunit) (CBF-alpha 2) (Acute myeloid leukemia 1 protein) (Oncogene AML-1) (Polyomavirus enhancer-binding protein 2 alpha B subunit) (PEBP2-alpha B) (PEA2-alpha B) (SL3-3 enhancer factor 1 [Source:Uniprot/SWISSPROT;Acc:Q01196]
16.3864 -17.55 5.36429e-08 700 7 1 12 [+] picture button
LOC100001035 ENSDART00000105120 Novel protein. [Source:Uniprot/SPTREMBL;Acc:Q5T4T1]Novel protein. [Source:Uniprot/SPTREMBL;Acc:Q5T4T1] BY ORTHOLOGY TO:ENSGACT00000003063
17.1124 -19.62 9.27271e-08 700 6 1 7 [+] picture button
zgc:112157 ENSDART00000016800 Zinc finger protein 367. [Source:Uniprot/SWISSPROT;Acc:Q567C6]
18.1925 -19.17 1.08636e-07 294 4 5 13 [+] picture button
LOC562150 ENSDART00000046913 AT-rich interactive domain-containing protein 4B (ARID domain- containing protein 4B) (Histone deacetylase complex subunit SAP180) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Retinoblastoma-binding protein 1-like 1) (Breast c [Source:Uniprot/SWISSPROT;Acc:Q4LE39]AT-rich interactive domain-containing protein 4B (ARID domain- containing protein 4B) (Histone deacetylase complex subunit SAP180) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Retinoblastoma-binding protein 1-like 1) (Breast c [Source:Uniprot/SWISSPROT;Acc:Q4LE39] BY ORTHOLOGY TO:ENSORLT00000015668
16.1004 -16.51 4.6294e-07 700 6 1 14 [+] picture button
LOC558321 ENSDART00000091370 Mitogen-activated protein kinase kinase kinase 2 (EC 2.7.11.25) (MAPK/ERK kinase kinase 2) (MEK kinase 2) (MEKK 2). [Source:Uniprot/SWISSPROT;Acc:Q9Y2U5]Mitogen-activated protein kinase kinase kinase 2 (EC 2.7.11.25) (MAPK/ERK kinase kinase 2) (MEK kinase 2) (MEKK 2). [Source:Uniprot/SWISSPROT;Acc:Q9Y2U5] BY ORTHOLOGY TO:SINFRUT00000141140
16.2228 -21.17 1.73467e-06 700 10 4 16 [+] picture button
zgc:101644 ENSDART00000007914 hypothetical protein LOC494100 [Source:RefSeq_peptide;Acc:NP_001008643]
17.1364 -19.3 2.1175e-06 433 10 2 15 [+] picture button
slc35e1 ENSDART00000027850 solute carrier family 35, member E1 [Source:RefSeq_peptide;Acc:NP_998239]
16.2155 -18.18 4.85609e-06 685 6 1 8 [+] picture button
her6 ENSDART00000023613 hairy-related 6 [Source:RefSeq_peptide;Acc:NP_571154]
16.1459 -10.04 4.97785e-06 312 8 4 17 [+] picture button
smad7 ENSDART00000009740 MAD, mothers against decapentaplegic homolog 7 [Source:RefSeq_peptide;Acc:NP_778257]
17.6782 -17.76 5.60548e-06 327 5 9 15 [+] picture button
NP_001082884.1 ENSDART00000091397 hypothetical protein LOC567533 [Source:RefSeq_peptide;Acc:NP_001082884]
17.0975 -18.07 6.19747e-06 700 6 1 7 [+] picture button
DOCK4 ENSDART00000087817 Dedicator of cytokinesis protein 4. [Source:Uniprot/SWISSPROT;Acc:Q8N1I0]
16.4901 -18.4 6.89247e-06 700 5 5 9 [+] picture button
chst10 ENSDART00000047211 Carbohydrate sulfotransferase 10 (EC 2.8.2.-) (HNK-1 sulfotransferase) (HNK1ST) (HNK-1ST). [Source:Uniprot/SWISSPROT;Acc:Q6AXM1]
16.5756 -16.13 9.56433e-06 420 6 3 11 [+] picture button
LOC100002536 ENSDART00000103243 Protein COQ10 A, mitochondrial precursor. [Source:Uniprot/SWISSPROT;Acc:Q96MF6]Protein COQ10 A, mitochondrial precursor. [Source:Uniprot/SWISSPROT;Acc:Q96MF6] BY ORTHOLOGY TO:ENSXETT00000020982
16.6976 -19.26 1.07905e-05 700 8 2 10 [+] picture button
LOC568361 ENSDART00000079232 LR11 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9R0N2]LR11 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9R0N2] BY ORTHOLOGY TO:ENSRNOT00000059974
17.4484 -22.22 1.09622e-05 700 7 1 10 [+] picture button
LOC565671 ENSDART00000013449 Carbohydrate sulfotransferase 13 (EC 2.8.2.5) (Chondroitin 4-O- sulfotransferase 3) (Chondroitin 4-sulfotransferase 3) (C4ST3) (C4ST- 3). [Source:Uniprot/SWISSPROT;Acc:Q8NET6]Carbohydrate sulfotransferase 13 (EC 2.8.2.5) (Chondroitin 4-O- sulfotransferase 3) (Chondroitin 4-sulfotransferase 3) (C4ST3) (C4ST- 3). [Source:Uniprot/SWISSPROT;Acc:Q8NET6] BY ORTHOLOGY TO:ENSCAFT00000006228
18.0458 -22.06 1.77795e-05 700 8 2 11 [+] picture button
ccnb2 ENSDART00000052541 cyclin B2 [Source:RefSeq_peptide;Acc:NP_955462]
16.7144 -14.72 2.14709e-05 247 7 3 16 [+] picture button
cdkn3 ENSDART00000057155 Cdkn3 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q7ZWJ8]
16.1459 -13.32 2.25271e-05 251 7 3 20 [+] picture button
MCM7 ENSDART00000105378 DNA replication licensing factor MCM7 (CDC47 homolog) (P1.1-MCM3). [Source:Uniprot/SWISSPROT;Acc:P33993]
16.2827 -15.23 2.35557e-05 700 6 1 7 [+] picture button
LOC795942 ENSDART00000091547 Potassium voltage-gated channel subfamily A member 1 (Voltage-gated potassium channel subunit Kv1.1) (HUKI) (HBK1). [Source:Uniprot/SWISSPROT;Acc:Q09470]Potassium voltage-gated channel subfamily A member 1 (Voltage-gated potassium channel subunit Kv1.1) (HUKI) (HBK1). [Source:Uniprot/SWISSPROT;Acc:Q09470] BY ORTHOLOGY TO:ENSMODT00000037481
16.5939 -18.31 2.62485e-05 700 4 5 5 [+] picture button
apbb1ip ENSDART00000021981 Amyloid beta A4 precursor protein-binding family B member 1- interacting protein (APBB1-interacting protein 1). [Source:Uniprot/SWISSPROT;Acc:Q6PFT9]
16.7175 -15.77 2.77729e-05 700 6 1 7 [+] picture button
zgc:154082 ENSDART00000059506 hypothetical protein LOC777711 [Source:RefSeq_peptide;Acc:NP_001071227]
17.441 -13.39 3.1744e-05 343 5 1 11 [+] picture button
zgc:103512 ENSDART00000023054 hypothetical protein LOC449995 [Source:RefSeq_peptide;Acc:NP_001006016]
15.9206 -19.2 4.37543e-05 700 7 2 11 [+] picture button
zgc:77855 ENSDART00000103214 hypothetical protein LOC393836 [Source:RefSeq_peptide;Acc:NP_957156]
16.3318 -16.08 4.68562e-05 700 5 1 3 [+] picture button
tbpl1 ENSDART00000053534 TBP-like 1 [Source:RefSeq_peptide;Acc:NP_991285]
16.8283 -12.61 5.00597e-05 612 9 1 10 [+] picture button
zgc:152659 ENSDART00000062656 hypothetical protein LOC751596 [Source:RefSeq_peptide;Acc:NP_001038806]
17.0555 -12.67 5.11163e-05 282 10 2 20 [+] picture button
zgc:103755 ENSDART00000097611 hypothetical protein LOC449988 [Source:RefSeq_peptide;Acc:NP_001006009]
16.487 -14.83 5.60891e-05 277 7 2 17 [+] picture button
zgc:153376 ENSDART00000091638 hypothetical protein LOC767772 [Source:RefSeq_peptide;Acc:NP_001070207]
16.7125 -24.86 5.6373e-05 747 10 1 10 [+] picture button
zgc:112535 ENSDART00000013682 hypothetical protein LOC541329 [Source:RefSeq_peptide;Acc:NP_001013475]
16.5413 -18.37 6.13171e-05 445 7 3 14 [+] picture button
wu:fd42g01 ENSDART00000061832 Wu:fd42g01 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6PBK5]
16.4527 -14.61 6.22922e-05 559 6 1 7 [+] picture button
ZBTB47 ENSDART00000080495 zinc finger and BTB domain containing 47 (ZBTB47), mRNA [Source:RefSeq_dna;Acc:NM_145166]
16.3022 -14.86 6.4516e-05 700 4 1 4 [+] picture button
IL18BP ENSDART00000086205 Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A (EC 3.1.4.17) (Cam-PDE 1A) (61 kDa Cam-PDE) (hCam-1). [Source:Uniprot/SWISSPROT;Acc:P54750]
16.3494 -16.1 6.68266e-05 700 6 1 6 [+] picture button
fbxw4 ENSDART00000043117 F-box and WD-40 domain protein 4 [Source:RefSeq_peptide;Acc:NP_571596]
16.3546 -14.86 6.6853e-05 387 7 2 10 [+] picture button
dock7 ENSDART00000065149 hypothetical protein LOC568817 [Source:RefSeq_peptide;Acc:NP_001076330]
16.0753 -16.66 6.99744e-05 700 8 1 9 [+] picture button
sgcg ENSDART00000055555 hypothetical protein LOC445292 [Source:RefSeq_peptide;Acc:NP_001003748]
16.9252 -17.28 7.02309e-05 700 3 1 3 [+] picture button
LOC555755 ENSDART00000076172 NOT ANNOTATED
17.1124 -18.57 7.16303e-05 700 4 1 2 [+] picture button
LOC556502 ENSDART00000003505 ADM precursor [Contains: Adrenomedullin (AM); Proadrenomedullin N-20 terminal peptide (ProAM-N20) (ProAM N-terminal 20 peptide) (PAMP)]. [Source:Uniprot/SWISSPROT;Acc:O77559]ADM precursor [Contains: Adrenomedullin (AM); Proadrenomedullin N-20 terminal peptide (ProAM-N20) (ProAM N-terminal 20 peptide) (PAMP)]. [Source:Uniprot/SWISSPROT;Acc:O77559] BY ORTHOLOGY TO:ENSCAFT00000012064
16.0753 -20.94 7.46005e-05 700 11 1 16 [+] picture button
ixl ENSDART00000033904 Mediator of RNA polymerase II transcription subunit 29 (Mediator complex subunit 29) (Intersex-like protein). [Source:Uniprot/SWISSPROT;Acc:Q8JHI6]
16.0322 -9.37 7.76613e-05 160 3 1 7 [+] picture button
zgc:110325 ENSDART00000057507 hypothetical protein LOC550504 [Source:RefSeq_peptide;Acc:NP_001017806]
18.007 -21.24 7.7936e-05 396 6 1 13 [+] picture button
NP_001073649.1 ENSDART00000077389 zinc finger protein 148 [Source:RefSeq_peptide;Acc:NP_001073649]
15.9924 -11.33 7.89149e-05 610 12 11 20 [+] picture button
map3k5 ENSDART00000046641 Mitogen-activated protein kinase kinase kinase 5 (EC 2.7.11.25) (MAPK/ERK kinase kinase 5) (MEK kinase 5) (MEKK 5) (Apoptosis signal- regulating kinase 1) (ASK-1). [Source:Uniprot/SWISSPROT;Acc:Q99683]Mitogen-activated protein kinase kinase kinase 5 (EC 2.7.11.25) (MAPK/ERK kinase kinase 5) (MEK kinase 5) (MEKK 5) (Apoptosis signal- regulating kinase 1) (ASK-1). [Source:Uniprot/SWISSPROT;Acc:Q99683] BY ORTHOLOGY TO:ENSCAFT00000000397
15.9754 -12.75 9.38253e-05 700 5 1 7 [+] picture button
zgc:122989 ENSDART00000067809 Zgc:122989 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q567J1]
15.8988 -16.81 9.62226e-05 700 7 3 10 [+] picture button
zgc:162565 ENSDART00000060116 Sb:cb578 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6DHD4]
17.0497 -16.65 0.000114022 700 4 1 2 [+] picture button
btg3 ENSDART00000100207 hypothetical protein LOC492479 [Source:RefSeq_peptide;Acc:NP_001007352]
16.4949 -17.65 0.000130956 700 4 6 13 [+] picture button
zgc:162565 ENSDART00000097332 Sb:cb578 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6DHD4]
16.9508 -16.65 0.000146887 700 5 1 3 [+] picture button
acin1a ENSDART00000076470 Hypothetical protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q0V955]
18.0788 -21.54 0.000147742 700 8 1 4 [+] picture button
LOC565599 ENSDART00000100529 Sodium-dependent phosphate transport protein 2A (Sodium/phosphate cotransporter 2A) (Na(+)/Pi cotransporter 2A) (Sodium-phosphate transport protein 2A) (Na(+)-dependent phosphate cotransporter 2A) (NaPi-2a) (Solute carrier family 34 member 1) (NaPi-3). [Source:Uniprot/SWISSPROT;Acc:Q06495]Sodium-dependent phosphate transport protein 2A (Sodium/phosphate cotransporter 2A) (Na(+)/Pi cotransporter 2A) (Sodium-phosphate transport protein 2A) (Na(+)-dependent phosphate cotransporter 2A) (NaPi-2a) (Solute carrier family 34 member 1) (NaPi-3). [Source:Uniprot/SWISSPROT;Acc:Q06495] BY ORTHOLOGY TO:ENSMMUT00000027843
15.978 -13.16 0.000147804 700 7 1 8 [+] picture button
TMEM2_DANRE ENSDART00000088011 Transmembrane protein 2. [Source:Uniprot/SWISSPROT;Acc:A3KPQ7]
16.1017 -20.02 0.000182647 700 7 1 9 [+] picture button

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Download table: GFF TXT
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