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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-18a

772 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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zgc:154043 ENSDART00000053576 hypothetical protein LOC768136 [Source:RefSeq_peptide;Acc:NP_001070750]
18.2031 -22.36 1.28591e-10 415 12 3 21 [+] picture button
zgc:110621 ENSDART00000039165 hypothetical protein LOC554088 [Source:RefSeq_peptide;Acc:NP_001019561]
17.3937 -17.05 1.6335e-08 380 12 7 27 [+] picture button
zgc:158346 ENSDART00000089822 hypothetical protein LOC569430 [Source:RefSeq_peptide;Acc:NP_001073511]
16.8534 -24.69 2.15846e-08 583 10 1 16 [+] picture button
smad2 ENSDART00000044756 Mothers against decapentaplegic homolog 2 (SMAD 2) (Mothers against DPP homolog 2) (Smad2). [Source:Uniprot/SWISSPROT;Acc:Q9I9P9]
17.9651 -18.06 3.13699e-08 258 3 1 8 [+] picture button
RUNX1 ENSDART00000055968 Runt-related transcription factor 1 (Core-binding factor, alpha 2 subunit) (CBF-alpha 2) (Acute myeloid leukemia 1 protein) (Oncogene AML-1) (Polyomavirus enhancer-binding protein 2 alpha B subunit) (PEBP2-alpha B) (PEA2-alpha B) (SL3-3 enhancer factor 1 [Source:Uniprot/SWISSPROT;Acc:Q01196]
15.6605 -17.27 5.36429e-08 700 7 1 12 [+] picture button
LOC100001035 ENSDART00000105120 Novel protein. [Source:Uniprot/SPTREMBL;Acc:Q5T4T1]Novel protein. [Source:Uniprot/SPTREMBL;Acc:Q5T4T1] BY ORTHOLOGY TO:ENSGACT00000003063
16.2827 -17.43 9.27271e-08 700 6 1 7 [+] picture button
zgc:112157 ENSDART00000016800 Zinc finger protein 367. [Source:Uniprot/SWISSPROT;Acc:Q567C6]
18.9884 -14.92 1.08636e-07 294 4 5 13 [+] picture button
LOC562150 ENSDART00000046913 AT-rich interactive domain-containing protein 4B (ARID domain- containing protein 4B) (Histone deacetylase complex subunit SAP180) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Retinoblastoma-binding protein 1-like 1) (Breast c [Source:Uniprot/SWISSPROT;Acc:Q4LE39]AT-rich interactive domain-containing protein 4B (ARID domain- containing protein 4B) (Histone deacetylase complex subunit SAP180) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Retinoblastoma-binding protein 1-like 1) (Breast c [Source:Uniprot/SWISSPROT;Acc:Q4LE39] BY ORTHOLOGY TO:ENSORLT00000015668
16.4161 -20.77 4.6294e-07 700 6 1 14 [+] picture button
LOC558321 ENSDART00000091370 Mitogen-activated protein kinase kinase kinase 2 (EC 2.7.11.25) (MAPK/ERK kinase kinase 2) (MEK kinase 2) (MEKK 2). [Source:Uniprot/SWISSPROT;Acc:Q9Y2U5]Mitogen-activated protein kinase kinase kinase 2 (EC 2.7.11.25) (MAPK/ERK kinase kinase 2) (MEK kinase 2) (MEKK 2). [Source:Uniprot/SWISSPROT;Acc:Q9Y2U5] BY ORTHOLOGY TO:SINFRUT00000141140
16.5348 -22.3 1.73467e-06 700 10 4 16 [+] picture button
zgc:101644 ENSDART00000007914 hypothetical protein LOC494100 [Source:RefSeq_peptide;Acc:NP_001008643]
17.6822 -20.08 2.1175e-06 433 10 2 15 [+] picture button
wnt8a ENSDART00000017635 Protein Wnt-8a precursor. [Source:Uniprot/SWISSPROT;Acc:P51028]
15.6605 -15.26 2.56332e-06 700 3 4 10 [+] picture button
slc35e1 ENSDART00000027850 solute carrier family 35, member E1 [Source:RefSeq_peptide;Acc:NP_998239]
16.0063 -18.91 4.85609e-06 685 6 1 8 [+] picture button
her6 ENSDART00000023613 hairy-related 6 [Source:RefSeq_peptide;Acc:NP_571154]
15.9185 -11.51 4.97785e-06 312 8 4 17 [+] picture button
smad7 ENSDART00000009740 MAD, mothers against decapentaplegic homolog 7 [Source:RefSeq_peptide;Acc:NP_778257]
16.89 -17.23 5.60548e-06 327 5 9 15 [+] picture button
NP_001082884.1 ENSDART00000091397 hypothetical protein LOC567533 [Source:RefSeq_peptide;Acc:NP_001082884]
16.0485 -18.24 6.19747e-06 700 6 1 7 [+] picture button
DOCK4 ENSDART00000087817 Dedicator of cytokinesis protein 4. [Source:Uniprot/SWISSPROT;Acc:Q8N1I0]
16.8013 -20.91 6.89247e-06 700 5 5 9 [+] picture button
chst10 ENSDART00000047211 Carbohydrate sulfotransferase 10 (EC 2.8.2.-) (HNK-1 sulfotransferase) (HNK1ST) (HNK-1ST). [Source:Uniprot/SWISSPROT;Acc:Q6AXM1]
15.6915 -11.26 9.56433e-06 420 6 3 11 [+] picture button
LOC100002536 ENSDART00000103243 Protein COQ10 A, mitochondrial precursor. [Source:Uniprot/SWISSPROT;Acc:Q96MF6]Protein COQ10 A, mitochondrial precursor. [Source:Uniprot/SWISSPROT;Acc:Q96MF6] BY ORTHOLOGY TO:ENSXETT00000020982
15.6605 -14.83 1.07905e-05 700 8 2 10 [+] picture button
LOC568361 ENSDART00000079232 LR11 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9R0N2]LR11 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9R0N2] BY ORTHOLOGY TO:ENSRNOT00000059974
16.2991 -17.28 1.09622e-05 700 7 1 10 [+] picture button
LOC565671 ENSDART00000013449 Carbohydrate sulfotransferase 13 (EC 2.8.2.5) (Chondroitin 4-O- sulfotransferase 3) (Chondroitin 4-sulfotransferase 3) (C4ST3) (C4ST- 3). [Source:Uniprot/SWISSPROT;Acc:Q8NET6]Carbohydrate sulfotransferase 13 (EC 2.8.2.5) (Chondroitin 4-O- sulfotransferase 3) (Chondroitin 4-sulfotransferase 3) (C4ST3) (C4ST- 3). [Source:Uniprot/SWISSPROT;Acc:Q8NET6] BY ORTHOLOGY TO:ENSCAFT00000006228
17.5273 -21.01 1.77795e-05 700 8 2 11 [+] picture button
ccnb2 ENSDART00000052541 cyclin B2 [Source:RefSeq_peptide;Acc:NP_955462]
16.8281 -16.87 2.14709e-05 247 7 3 16 [+] picture button
cdkn3 ENSDART00000057155 Cdkn3 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q7ZWJ8]
17.5103 -20.04 2.25271e-05 251 7 3 20 [+] picture button
MCM7 ENSDART00000105378 DNA replication licensing factor MCM7 (CDC47 homolog) (P1.1-MCM3). [Source:Uniprot/SWISSPROT;Acc:P33993]
16.4901 -17.73 2.35557e-05 700 6 1 7 [+] picture button
LOC795942 ENSDART00000091547 Potassium voltage-gated channel subfamily A member 1 (Voltage-gated potassium channel subunit Kv1.1) (HUKI) (HBK1). [Source:Uniprot/SWISSPROT;Acc:Q09470]Potassium voltage-gated channel subfamily A member 1 (Voltage-gated potassium channel subunit Kv1.1) (HUKI) (HBK1). [Source:Uniprot/SWISSPROT;Acc:Q09470] BY ORTHOLOGY TO:ENSMODT00000037481
15.7642 -17.7 2.62485e-05 700 4 5 5 [+] picture button
zgc:154082 ENSDART00000059506 hypothetical protein LOC777711 [Source:RefSeq_peptide;Acc:NP_001071227]
17.6661 -15.75 3.1744e-05 343 5 1 11 [+] picture button
LOC100007152 ENSDART00000089410 Serine/threonine-protein kinase ULK2 (EC 2.7.11.1) (Unc-51-like kinase 2). [Source:Uniprot/SWISSPROT;Acc:Q8IYT8]Serine/threonine-protein kinase ULK2 (EC 2.7.11.1) (Unc-51-like kinase 2). [Source:Uniprot/SWISSPROT;Acc:Q8IYT8] BY ORTHOLOGY TO:ENSBTAT00000029701
16.4208 -15.23 3.38138e-05 700 7 4 9 [+] picture button
zgc:63557 ENSDART00000056634 hypothetical protein LOC393978 [Source:RefSeq_peptide;Acc:NP_957297]
16.3538 -16.83 3.6266e-05 594 1 4 5 [+] picture button
eif4a3 ENSDART00000014887 DEAD (Asp-Glu-Ala-Asp) box polypeptide 48 [Source:RefSeq_peptide;Acc:NP_957372]
16.0322 -15.99 3.91307e-05 177 4 1 5 [+] picture button
zgc:77855 ENSDART00000103214 hypothetical protein LOC393836 [Source:RefSeq_peptide;Acc:NP_957156]
17.164 -19.2 4.68562e-05 700 5 1 3 [+] picture button
tbpl1 ENSDART00000053534 TBP-like 1 [Source:RefSeq_peptide;Acc:NP_991285]
16.8283 -15.73 5.00597e-05 612 9 1 10 [+] picture button
zgc:152659 ENSDART00000062656 hypothetical protein LOC751596 [Source:RefSeq_peptide;Acc:NP_001038806]
16.7144 -14.18 5.11163e-05 282 10 2 20 [+] picture button
ccna1 ENSDART00000002166 cyclin A1 [Source:RefSeq_peptide;Acc:NP_997983]
15.9511 -12.41 5.34597e-05 377 10 6 26 [+] picture button
zgc:153376 ENSDART00000091638 hypothetical protein LOC767772 [Source:RefSeq_peptide;Acc:NP_001070207]
16.5049 -20.74 5.6373e-05 747 10 1 10 [+] picture button
zgc:153228 ENSDART00000087494 hypothetical protein LOC566923 [Source:RefSeq_peptide;Acc:NP_001070639]
16.0261 -19.68 6.12126e-05 301 7 1 14 [+] picture button
ZBTB47 ENSDART00000080495 zinc finger and BTB domain containing 47 (ZBTB47), mRNA [Source:RefSeq_dna;Acc:NM_145166]
17.652 -20.06 6.4516e-05 700 4 1 4 [+] picture button
zgc:110031 ENSDART00000076320 hypothetical protein LOC553580 [Source:RefSeq_peptide;Acc:NP_001018395]
15.6605 -21.82 6.64353e-05 700 7 1 9 [+] picture button
dock7 ENSDART00000065149 hypothetical protein LOC568817 [Source:RefSeq_peptide;Acc:NP_001076330]
17.631 -27.42 6.99744e-05 700 8 1 9 [+] picture button
sgcg ENSDART00000055555 hypothetical protein LOC445292 [Source:RefSeq_peptide;Acc:NP_001003748]
15.783 -19.69 7.02309e-05 700 3 1 3 [+] picture button
LOC555755 ENSDART00000076172 NOT ANNOTATED
16.3864 -27.28 7.16303e-05 700 4 1 2 [+] picture button
p2rx4b ENSDART00000062242 purinergic receptor P2X, ligand-gated ion channel, 4b [Source:RefSeq_peptide;Acc:NP_945338]
15.9716 -15.3 7.63529e-05 700 5 2 6 [+] picture button
zgc:110325 ENSDART00000057507 hypothetical protein LOC550504 [Source:RefSeq_peptide;Acc:NP_001017806]
16.7918 -20.28 7.7936e-05 396 6 1 13 [+] picture button
zgc:122989 ENSDART00000067809 Zgc:122989 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q567J1]
15.691 -14.47 9.62226e-05 700 7 3 10 [+] picture button
LOC100004140 ENSDART00000106387 Protocadherin-15-CD3 isoform 8. [Source:Uniprot/SPTREMBL;Acc:Q0ZM05]Protocadherin-15-CD3 isoform 8. [Source:Uniprot/SPTREMBL;Acc:Q0ZM05] BY ORTHOLOGY TO:ENSGALT00000004355
16.1534 -17.79 0.000112114 645 6 3 9 [+] picture button
zgc:162565 ENSDART00000060116 Sb:cb578 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6DHD4]
17.5727 -16.03 0.000114022 700 4 1 2 [+] picture button
btg3 ENSDART00000100207 hypothetical protein LOC492479 [Source:RefSeq_peptide;Acc:NP_001007352]
16.8081 -21.78 0.000130956 700 4 6 13 [+] picture button
si:ch211-221n23.1 ENSDART00000056135 si:ch211-221n23.1 [Source:RefSeq_peptide;Acc:NP_001076421]
15.7983 -15.63 0.000139258 700 5 9 10 [+] picture button
zgc:162565 ENSDART00000097332 Sb:cb578 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6DHD4]
17.4708 -16.03 0.000146887 700 5 1 3 [+] picture button
acin1a ENSDART00000076470 Hypothetical protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q0V955]
16.7144 -17.9 0.000147742 700 8 1 4 [+] picture button
LOC565599 ENSDART00000100529 Sodium-dependent phosphate transport protein 2A (Sodium/phosphate cotransporter 2A) (Na(+)/Pi cotransporter 2A) (Sodium-phosphate transport protein 2A) (Na(+)-dependent phosphate cotransporter 2A) (NaPi-2a) (Solute carrier family 34 member 1) (NaPi-3). [Source:Uniprot/SWISSPROT;Acc:Q06495]Sodium-dependent phosphate transport protein 2A (Sodium/phosphate cotransporter 2A) (Na(+)/Pi cotransporter 2A) (Sodium-phosphate transport protein 2A) (Na(+)-dependent phosphate cotransporter 2A) (NaPi-2a) (Solute carrier family 34 member 1) (NaPi-3). [Source:Uniprot/SWISSPROT;Acc:Q06495] BY ORTHOLOGY TO:ENSMMUT00000027843
15.6647 -13.16 0.000147804 700 7 1 8 [+] picture button
LOC799591 ENSDART00000103618 Uncharacterized protein C14orf140. [Source:Uniprot/SWISSPROT;Acc:Q53FD0]Uncharacterized protein C14orf140. [Source:Uniprot/SWISSPROT;Acc:Q53FD0] BY ORTHOLOGY TO:ENSGALT00000016770
15.6605 -21.82 0.000148687 700 6 1 7 [+] picture button

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Download table: GFF TXT
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