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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-17a

851 hits found.


Page 1 of 18
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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DOCK4 ENSDART00000087817 Dedicator of cytokinesis protein 4. [Source:Uniprot/SWISSPROT;Acc:Q8N1I0]
18.0458 -17.09 2.40123e-10 700 5 5 9 [+] picture button
wee1 ENSDART00000060963 wee1 [Source:RefSeq_peptide;Acc:NP_001005770]
16.5724 -18.32 1.30531e-09 1018 4 3 6 [+] picture button
PDE3B ENSDART00000089640 cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B) (CGIPDE1) (CGIP1). [Source:Uniprot/SWISSPROT;Acc:Q13370]
15.9882 -15.23 1.7557e-09 700 7 11 8 [+] picture button
LOC559017 ENSDART00000057211 Rho guanine nucleotide exchange factor 4 (APC-stimulated guanine nucleotide exchange factor) (Asef). [Source:Uniprot/SWISSPROT;Acc:Q9NR80]Rho guanine nucleotide exchange factor 4 (APC-stimulated guanine nucleotide exchange factor) (Asef). [Source:Uniprot/SWISSPROT;Acc:Q9NR80] BY ORTHOLOGY TO:ENSPTRT00000023127
16.6976 -19.34 3.63239e-09 700 6 3 11 [+] picture button
LOC562150 ENSDART00000046913 AT-rich interactive domain-containing protein 4B (ARID domain- containing protein 4B) (Histone deacetylase complex subunit SAP180) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Retinoblastoma-binding protein 1-like 1) (Breast c [Source:Uniprot/SWISSPROT;Acc:Q4LE39]AT-rich interactive domain-containing protein 4B (ARID domain- containing protein 4B) (Histone deacetylase complex subunit SAP180) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Retinoblastoma-binding protein 1-like 1) (Breast c [Source:Uniprot/SWISSPROT;Acc:Q4LE39] BY ORTHOLOGY TO:ENSORLT00000015668
16.837 -17.25 2.75341e-08 700 6 1 14 [+] picture button
zgc:101644 ENSDART00000007914 hypothetical protein LOC494100 [Source:RefSeq_peptide;Acc:NP_001008643]
18.1187 -17.1 4.17287e-08 433 10 2 15 [+] picture button
LOC557798 ENSDART00000091105 Microfibrillar-associated protein 3-like precursor. [Source:Uniprot/SWISSPROT;Acc:Q6AYP2]Microfibrillar-associated protein 3-like precursor. [Source:Uniprot/SWISSPROT;Acc:Q6AYP2] BY ORTHOLOGY TO:ENSRNOT00000015759
16.0945 -22.87 1.4307e-07 700 6 2 8 [+] picture button
Q1MT39_DANRE ENSDART00000085685 Novel protein similar to vertebratesirtuin (Silent mating type information regulation 2 homolog) 7 (S. cerevisiae) (SIRT7) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1MT39]
16.9277 -13.6 1.66601e-07 700 5 2 8 [+] picture button
zgc:110621 ENSDART00000039165 hypothetical protein LOC554088 [Source:RefSeq_peptide;Acc:NP_001019561]
17.3937 -16.42 4.42396e-07 380 12 7 27 [+] picture button
zgc:162267 ENSDART00000073399 hypothetical protein LOC100037371 [Source:RefSeq_peptide;Acc:NP_001082992]
17.9651 -16.4 5.09418e-07 145 5 6 21 [+] picture button
zgc:112157 ENSDART00000016800 Zinc finger protein 367. [Source:Uniprot/SWISSPROT;Acc:Q567C6]
17.7377 -18.39 6.6397e-07 294 4 5 13 [+] picture button
zgc:92629 ENSDART00000054153 Density-regulated protein (DRP). [Source:Uniprot/SWISSPROT;Acc:Q6DH65]
16.9396 -17.61 7.51057e-07 700 5 5 7 [+] picture button
sc4mol ENSDART00000078277 C-4 methylsterol oxidase (EC 1.14.13.72) (Methylsterol monooxygenase). [Source:Uniprot/SWISSPROT;Acc:Q7ZW77]
16.9025 -11.18 1.14265e-06 615 3 1 8 [+] picture button
zgc:112535 ENSDART00000013682 hypothetical protein LOC541329 [Source:RefSeq_peptide;Acc:NP_001013475]
16.9766 -17.47 2.10233e-06 445 7 3 14 [+] picture button
si:ch73-264b7.2 ENSDART00000105675 TPR repeat-containing protein C18orf17 homolog. [Source:Uniprot/SWISSPROT;Acc:Q1LXE6]
17.0087 -25.46 4.04505e-06 700 5 7 9 [+] picture button
zgc:152659 ENSDART00000062656 hypothetical protein LOC751596 [Source:RefSeq_peptide;Acc:NP_001038806]
16.1459 -14.61 4.68046e-06 282 10 2 20 [+] picture button
mtnr1ar ENSDART00000054674 Melatonin receptor type 1A Z1.7 (MEL-1A-R) (Fragment). [Source:Uniprot/SWISSPROT;Acc:P51046]
16.2892 -11.37 5.03069e-06 524 7 4 15 [+] picture button
LOC557682 ENSDART00000013894 DCN1, defective in cullin neddylation 1, domain containing 3 [Source:RefSeq_peptide;Acc:NP_775746]DCN1, defective in cullin neddylation 1, domain containing 3 [Source:RefSeq_peptide;Acc:NP_775746] BY ORTHOLOGY TO:ENST00000324344
16.1188 -10.29 5.6866e-06 700 7 1 11 [+] picture button
ccnb2 ENSDART00000052541 cyclin B2 [Source:RefSeq_peptide;Acc:NP_955462]
16.2596 -17.45 6.89994e-06 247 7 3 16 [+] picture button
LOC564899 ENSDART00000066603 PREDICTED: Pan troglodytes similar to MEK kinase 1 (MAP3K1), mRNA. [Source:RefSeq_dna;Acc:XR_023149]PREDICTED: Pan troglodytes similar to MEK kinase 1 (MAP3K1), mRNA. [Source:RefSeq_dna;Acc:XR_023149] BY ORTHOLOGY TO:ENSPTRT00000031328
16.0993 -20.8 7.09448e-06 700 7 1 9 [+] picture button
zgc:110203 ENSDART00000002783 phytanoyl-CoA hydroxylase [Source:RefSeq_peptide;Acc:NP_001017823]
16.0051 -17.65 8.06428e-06 700 4 1 6 [+] picture button
zgc:114134 ENSDART00000034287 hypothetical protein LOC565499 [Source:RefSeq_peptide;Acc:NP_001020708]
16.1209 -15.04 8.59292e-06 873 2 1 5 [+] picture button
zgc:110580 ENSDART00000043316 hypothetical protein LOC553631 [Source:RefSeq_peptide;Acc:NP_001018440]
18.3062 -15.91 1.01526e-05 234 8 2 18 [+] picture button
LOC100004341 ENSDART00000074399 calcium/calmodulin-dependent protein kinase II inhibitor 1 [Source:RefSeq_peptide;Acc:NP_061054]calcium/calmodulin-dependent protein kinase II inhibitor 1 [Source:RefSeq_peptide;Acc:NP_061054] BY ORTHOLOGY TO:ENSGACT00000010326
19.8626 -30.15 1.09268e-05 700 7 3 13 [+] picture button
LOC562607 ENSDART00000051278 Transportin-1 (Importin beta-2) (Karyopherin beta-2) (M9 region interaction protein) (MIP). [Source:Uniprot/SWISSPROT;Acc:Q92973]Transportin-1 (Importin beta-2) (Karyopherin beta-2) (M9 region interaction protein) (MIP). [Source:Uniprot/SWISSPROT;Acc:Q92973] BY ORTHOLOGY TO:ENSORLT00000003967
16.3318 -12.7 1.16417e-05 700 9 2 14 [+] picture button
USP46 ENSDART00000066678 Ubiquitin carboxyl-terminal hydrolase 46 (EC 3.1.2.15) (Ubiquitin thioesterase 46) (Ubiquitin-specific-processing protease 46) (Deubiquitinating enzyme 46). [Source:Uniprot/SWISSPROT;Acc:P62068]
18.0523 -25.94 1.25711e-05 700 4 1 8 [+] picture button
tcea2 ENSDART00000014222 transcription elongation factor A (SII), 2 [Source:RefSeq_peptide;Acc:NP_957280]
16.3743 -12.08 1.35525e-05 643 9 1 13 [+] picture button
glra4b ENSDART00000006474 Glycine receptor, alpha 4b (Fragment). [Source:Uniprot/SPTREMBL;Acc:A2BGE6]
18.761 -16.86 1.76198e-05 308 5 1 12 [+] picture button
plekhf1 ENSDART00000036597 pleckstrin homology domain containing, family F (with FYVE domain) member 1 [Source:RefSeq_peptide;Acc:NP_956634]
16.3733 -17.96 1.85524e-05 223 8 1 19 [+] picture button
si:ch211-198b3.2 ENSDART00000014163 Novel protein similar to vertebrate fibronectin type III domain containing 1 (FNDC1) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5SPC4]
16.4085 -11.76 2.03557e-05 700 7 4 11 [+] picture button
A2ASQ4_DANRE ENSDART00000047143 Novel protein similar to vertebrate spectrin domain with coiled-coils 1 (SPECC1). [Source:Uniprot/SPTREMBL;Acc:A2ASQ4]
16.6541 -17.13 2.22278e-05 700 11 3 19 [+] picture button
zgc:92785 ENSDART00000102439 hypothetical protein LOC436820 [Source:RefSeq_peptide;Acc:NP_001002547]
17.7099 -24 2.27421e-05 700 4 1 12 [+] picture button
rel ENSDART00000077612 v-rel reticuloendotheliosis viral oncogene homolog [Source:RefSeq_peptide;Acc:NP_001001841]
17.1692 -12.18 2.37586e-05 269 6 1 11 [+] picture button
LOC556324 ENSDART00000038120 Uncharacterized protein C10orf46. [Source:Uniprot/SWISSPROT;Acc:Q86Y37]Uncharacterized protein C10orf46. [Source:Uniprot/SWISSPROT;Acc:Q86Y37] BY ORTHOLOGY TO:ENST00000369151
16.0893 -17.63 2.56177e-05 700 7 2 11 [+] picture button
POLK ENSDART00000083937 DNA polymerase kappa (EC 2.7.7.7) (DINB protein) (DINP). [Source:Uniprot/SWISSPROT;Acc:Q9UBT6]
16.568 -14.48 2.59257e-05 700 4 4 8 [+] picture button
aldh16a1 ENSDART00000055283 aldehyde dehydrogenase 16 family, member A1 [Source:RefSeq_peptide;Acc:NP_001073423]
17.2829 -10.27 2.74376e-05 252 6 1 17 [+] picture button
zgc:114076 ENSDART00000082222 hypothetical protein LOC619252 [Source:RefSeq_peptide;Acc:NP_001028906]
17.2609 -19.88 2.91212e-05 608 7 1 11 [+] picture button
LOC559841 ENSDART00000048814 EH-domain containing 1. [Source:Uniprot/SPTREMBL;Acc:Q641Z6]EH-domain containing 1. [Source:Uniprot/SPTREMBL;Acc:Q641Z6] BY ORTHOLOGY TO:ENSRNOT00000028547
16.4901 -16.34 3.00377e-05 700 3 1 7 [+] picture button
pygo2 ENSDART00000104731 pygopus homolog 2 [Source:RefSeq_peptide;Acc:NP_001028283]
16.8213 -13.01 3.42008e-05 700 6 2 12 [+] picture button
zgc:111996 ENSDART00000009360 Ankyrin repeat domain-containing protein 29. [Source:Uniprot/SWISSPROT;Acc:Q502M6]
16.3563 -12.75 3.47056e-05 494 10 2 11 [+] picture button
zgc:113032 ENSDART00000058100 xeroderma pigmentosum, complementation group C [Source:RefSeq_peptide;Acc:NP_001038675]
16.9252 -18.23 3.83704e-05 700 5 1 7 [+] picture button
pycrl ENSDART00000002787 pyrroline-5-carboxylate reductase-like [Source:RefSeq_peptide;Acc:NP_001038403]
16.5219 -19.13 3.99759e-05 988 6 2 7 [+] picture button
rnaseh1 ENSDART00000062441 ribonuclease H1 [Source:RefSeq_peptide;Acc:NP_001002659]
18.5336 -16.2 4.15839e-05 233 10 1 28 [+] picture button
zgc:110197 ENSDART00000026059 hypothetical protein LOC550525 [Source:RefSeq_peptide;Acc:NP_001017827]
16.8013 -19.73 4.33916e-05 700 7 1 9 [+] picture button
zgc:101624 ENSDART00000082251 hypothetical protein LOC450071 [Source:RefSeq_peptide;Acc:NP_001006091]
18.2437 -13.45 4.80451e-05 345 8 2 18 [+] picture button
zgc:110307 ENSDART00000014685 hypothetical protein LOC550253 [Source:RefSeq_peptide;Acc:NP_001017591]
16.4812 -11.74 4.87531e-05 395 7 3 19 [+] picture button
A4JYI4_DANRE ENSDART00000082745 CDNA, clone cssl:d0132. [Source:Uniprot/SPTREMBL;Acc:A4JYI4]
16.1462 -14.12 5.04356e-05 700 6 1 6 [+] picture button
LOC558552 ENSDART00000075040 Tubulin beta-1 chain. [Source:Uniprot/SWISSPROT;Acc:Q9H4B7]Tubulin beta-1 chain. [Source:Uniprot/SWISSPROT;Acc:Q9H4B7] BY ORTHOLOGY TO:ENSMMUT00000018499
16.3444 -18.15 5.16787e-05 700 9 2 10 [+] picture button
Q5CZM5_DANRE ENSDART00000061738 LOC553310 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5CZM5]
17.2829 -14.33 5.26774e-05 200 5 2 15 [+] picture button
LOC558825 ENSDART00000085419 PREDICTED: Bos taurus similar to Leucine-rich repeat-containing G protein-coupled receptor 4 precursor (LOC505423), mRNA. [Source:RefSeq_dna;Acc:XR_028587]PREDICTED: Bos taurus similar to Leucine-rich repeat-containing G protein-coupled receptor 4 precursor (LOC505423), mRNA. [Source:RefSeq_dna;Acc:XR_028587] BY ORTHOLOGY TO:ENSBTAT00000003370
16.2604 -13.38 5.93662e-05 700 5 4 7 [+] picture button

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