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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-16b

728 hits found.


Page 1 of 15
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
picture button picture button picture button picture button picture button picture button picture button picture button picture button picture button
zgc:86716 ENSDART00000063786 hypothetical protein LOC415235 [Source:RefSeq_peptide;Acc:NP_001002145]
16.483 -15.28 2.00656e-08 527 6 1 11 [+] picture button
si:ch211-134n17.1 ENSDART00000078459 hypothetical protein LOC566642 [Source:RefSeq_peptide;Acc:NP_001038577]
16.0753 -17.31 5.85244e-08 700 8 9 13 [+] picture button
crsp7 ENSDART00000003801 cofactor required for Sp1 transcriptional activation, subunit 7 [Source:RefSeq_peptide;Acc:NP_998224]
18.586 -22.04 7.34642e-07 383 10 9 19 [+] picture button
LOC100005093 ENSDART00000056784 NOT ANNOTATED
17.3908 -16.66 1e-06 700 6 1 4 [+] picture button
ENSDART00000103937 NOT ANNOTATED
17.3198 -16.66 1e-06 700 7 1 5 [+] picture button
ENSDART00000102700 NOT ANNOTATED
16.2596 -23.17 1e-06 700 16 1 17 [+] picture button
slc7a4 ENSDART00000098701 solute carrier family 7 (cationic amino acid transporter, y+ system), member 4 [Source:RefSeq_peptide;Acc:NP_919408]
16.1459 -13.63 1.57311e-06 252 6 4 11 [+] picture button
LOC569679 ENSDART00000088884 Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15) (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3) (Deubiquitinating enzyme 3). [Source:Uniprot/SWISSPROT;Acc:Q9Y6I4]Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15) (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3) (Deubiquitinating enzyme 3). [Source:Uniprot/SWISSPROT;Acc:Q9Y6I4] BY ORTHOLOGY TO:ENSGALT00000005420
16.7454 -16.78 1.9745e-06 700 3 7 4 [+] picture button
tbc1d19 ENSDART00000025308 TBC1 domain family, member 19 [Source:RefSeq_peptide;Acc:NP_956785]
18.0788 -17.03 4.57471e-06 209 7 2 17 [+] picture button
SVEP1 ENSDART00000076882 polydom [Source:RefSeq_peptide;Acc:NP_699197]
17.7347 -17.68 5.16793e-06 700 4 7 10 [+] picture button
si:dkey-260n20.1 ENSDART00000044397 hypothetical protein LOC559505 [Source:RefSeq_peptide;Acc:NP_001038364]
16.5148 -14.05 5.41067e-06 700 6 9 9 [+] picture button
eno1 ENSDART00000009337 enolase 1, (alpha) [Source:RefSeq_peptide;Acc:NP_997887]
16.6027 -20.46 6.45458e-06 405 5 3 10 [+] picture button
ctsd ENSDART00000080423 cathepsin D [Source:RefSeq_peptide;Acc:NP_571785]
16.7918 -18.09 9.11498e-06 388 9 4 16 [+] picture button
NP_001077297.1 ENSDART00000028854 hypothetical protein LOC559477 [Source:RefSeq_peptide;Acc:NP_001077297]
19.8981 -16.68 1.35729e-05 230 7 2 11 [+] picture button
znf259 ENSDART00000063923 zinc finger protein 259 [Source:RefSeq_peptide;Acc:NP_998273]
16.9418 -12.66 1.77885e-05 284 3 1 7 [+] picture button
LOC565314 ENSDART00000061961 Codanin-1. [Source:Uniprot/SWISSPROT;Acc:Q8IWY9]Codanin-1. [Source:Uniprot/SWISSPROT;Acc:Q8IWY9] BY ORTHOLOGY TO:ENSCAFT00000017777
16.2103 -17.63 2.37876e-05 700 8 4 9 [+] picture button
CPEB2 ENSDART00000092757 Cytoplasmic polyadenylation element-binding protein 2 (CPE-binding protein 2) (CPE-BP2) (hCPEB-2). [Source:Uniprot/SWISSPROT;Acc:Q7Z5Q1]
16.9999 -17.14 2.92334e-05 700 4 5 8 [+] picture button
LOC569358 ENSDART00000003066 Cytohesin-2 (PH, SEC7 and coiled-coil domain-containing protein 2) (ARF nucleotide-binding site opener) (Protein ARNO) (ARF exchange factor). [Source:Uniprot/SWISSPROT;Acc:Q99418]Cytohesin-2 (PH, SEC7 and coiled-coil domain-containing protein 2) (ARF nucleotide-binding site opener) (Protein ARNO) (ARF exchange factor). [Source:Uniprot/SWISSPROT;Acc:Q99418] BY ORTHOLOGY TO:ENST00000325139
16.2827 -13.98 2.97464e-05 700 7 2 8 [+] picture button
zgc:112131 ENSDART00000105615 hypothetical protein LOC553679 [Source:RefSeq_peptide;Acc:NP_001018488]
16.294 -11.56 3.5282e-05 390 4 4 5 [+] picture button
si:ch211-232d19.4 ENSDART00000089161 Novel protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1LY09]
16.905 -13.44 4.23361e-05 700 3 1 5 [+] picture button
OSBPL1A (1 of 2) ENSDART00000075837 Oxysterol-binding protein-related protein 1 (OSBP-related protein 1) (ORP-1). [Source:Uniprot/SWISSPROT;Acc:Q9BXW6]
16.2503 -17.91 5.1194e-05 700 6 2 8 [+] picture button
ush1c ENSDART00000073584 Usher syndrome 1C (autosomal recessive, severe) [Source:RefSeq_peptide;Acc:NP_001035018]
16.2034 -18.07 5.21756e-05 539 7 3 8 [+] picture button
ENSDART00000077377 NOT ANNOTATED
17.3908 -16.66 5.35454e-05 700 4 1 4 [+] picture button
mtx3 ENSDART00000028251 metaxin 3 [Source:RefSeq_peptide;Acc:NP_991184]
16.7605 -14.08 5.7215e-05 636 7 1 8 [+] picture button
zgc:91874 ENSDART00000053494 hypothetical protein LOC431735 [Source:RefSeq_peptide;Acc:NP_001002188]
16.1529 -19.92 6.46431e-05 1598 2 1 2 [+] picture button
ik ENSDART00000012396 IK cytokine [Source:RefSeq_peptide;Acc:NP_955883]
16.7602 -9.19 6.56772e-05 330 9 2 20 [+] picture button
arhgdia ENSDART00000064311 Rho GDP dissociation inhibitor (GDI) alpha [Source:RefSeq_peptide;Acc:NP_998626]
16.135 -28.04 7.10523e-05 1450 4 1 4 [+] picture button
anapc5 ENSDART00000026592 anaphase promoting complex subunit 5 [Source:RefSeq_peptide;Acc:NP_955916]
16.6007 -11.26 7.40706e-05 113 3 2 8 [+] picture button
zgc:158618 ENSDART00000087684 hypothetical protein LOC570062 [Source:RefSeq_peptide;Acc:NP_001073665]
18.1126 -19.21 8.80073e-05 499 2 1 4 [+] picture button
USP19 ENSDART00000020925 Ubiquitin carboxyl-terminal hydrolase 19 (EC 3.1.2.15) (Ubiquitin thioesterase 19) (Ubiquitin-specific-processing protease 19) (Deubiquitinating enzyme 19) (Zinc finger MYND domain-containing protein 9) (Fragment). [Source:Uniprot/SWISSPROT;Acc:O94966]
17.1905 -22.9 0.000103096 700 7 1 10 [+] picture button
zgc:91862 ENSDART00000073648 hypothetical protein LOC445075 [Source:RefSeq_peptide;Acc:NP_001003469]
16.7948 -17.27 0.000112518 324 11 2 22 [+] picture button
gfra1b ENSDART00000005456 gdnf family receptor alpha 1b [Source:RefSeq_peptide;Acc:NP_571806]
16.649 -18.88 0.000130022 700 5 1 7 [+] picture button
LOC565568 ENSDART00000085318 NOT ANNOTATED
16.8917 -17.83 0.000130488 700 10 1 14 [+] picture button
LOC796380 ENSDART00000083129 translation initiation factor 3, subunit S9, putativetranslation initiation factor 3, subunit S9, putative BY ORTHOLOGY TO:AAEL007718-RA
17.047 -19.68 0.000134667 700 7 1 10 [+] picture button
si:dkey-72g4.2 ENSDART00000061233 hypothetical protein LOC100038781 [Source:RefSeq_peptide;Acc:NP_001083030]
17.2012 -20.22 0.000138411 700 3 1 6 [+] picture button
dynll2 ENSDART00000081325 dynein, light chain, LC8-type 2 [Source:RefSeq_peptide;Acc:NP_998189]
16.2069 -15.1 0.000152928 461 6 2 11 [+] picture button
zgc:77004 ENSDART00000014753 hypothetical protein LOC406608 [Source:RefSeq_peptide;Acc:NP_998481]
16.1562 -16.24 0.000154252 667 7 1 9 [+] picture button
ung ENSDART00000062359 uracil-DNA glycosylase [Source:RefSeq_peptide;Acc:NP_957268]
17.1692 -13.63 0.000160659 276 10 3 15 [+] picture button
eef1d ENSDART00000002962 Eef1d protein. [Source:Uniprot/SPTREMBL;Acc:Q4V9J7]
17.3966 -17.22 0.000168964 91 2 4 6 [+] picture button
zgc:162756 ENSDART00000043452 hypothetical protein LOC565994 [Source:RefSeq_peptide;Acc:NP_001038558]
17.3159 -15.07 0.000176906 700 6 3 9 [+] picture button
SETX ENSDART00000082314 Probable helicase senataxin (EC 3.6.1.-) (SEN1 homolog). [Source:Uniprot/SWISSPROT;Acc:Q7Z333]
17.1354 -20.32 0.000184442 700 7 1 10 [+] picture button
acox3 ENSDART00000056745 pristanoyl acyl-Coenzyme A oxidase 3 [Source:RefSeq_peptide;Acc:NP_998312]
17.2829 -19.05 0.000209025 700 10 2 13 [+] picture button
SLC30A10 ENSDART00000052076 solute carrier family 30 (zinc transporter), member 10 [Source:RefSeq_peptide;Acc:NP_061183]
16.6748 -20.89 0.000285314 700 4 2 7 [+] picture button
NP_001076320.1 ENSDART00000051224 hypothetical protein LOC567170 [Source:RefSeq_peptide;Acc:NP_001076320]
16.179 -14.61 0.000305982 700 9 1 9 [+] picture button
XR_029682.1 ENSDART00000075787 hypothetical protein LOC100007877 (LOC100007877), mRNA [Source:RefSeq_dna;Acc:XR_029682]
16.9529 -20.66 0.000326313 538 7 2 10 [+] picture button
tarbp2 ENSDART00000103455 TAR (HIV) RNA binding protein 2 [Source:RefSeq_peptide;Acc:NP_956291]
16.4233 -19.46 0.000327311 747 6 1 8 [+] picture button
zgc:92698 ENSDART00000062537 hypothetical protein LOC436677 [Source:RefSeq_peptide;Acc:NP_001002404]
18.9318 -14.58 0.000352396 308 6 4 18 [+] picture button
zgc:77397 ENSDART00000078556 hypothetical protein LOC402924 [Source:RefSeq_peptide;Acc:NP_991192]
17.2161 -16.16 0.000356311 700 6 1 6 [+] picture button
ASB18 ENSDART00000059213 ankyrin repeat and SOCS box-containing 18 [Source:RefSeq_peptide;Acc:NP_997721]
16.8013 -15.28 0.000371049 700 2 1 3 [+] picture button
zgc:101617 ENSDART00000002215 hypothetical protein LOC492808 [Source:RefSeq_peptide;Acc:NP_001007450]
16.7968 -18.4 0.000373904 491 9 2 11 [+] picture button

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Download table: GFF TXT
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