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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-15c

867 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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crsp7 ENSDART00000003801 cofactor required for Sp1 transcriptional activation, subunit 7 [Source:RefSeq_peptide;Acc:NP_998224]
16.4581 -15.39 1.30065e-08 383 10 9 19 [+] picture button
zgc:86716 ENSDART00000063786 hypothetical protein LOC415235 [Source:RefSeq_peptide;Acc:NP_001002145]
15.5974 -21.18 1.97775e-08 527 6 1 11 [+] picture button
ENSDART00000078515 NOT ANNOTATED
16.6743 -22.48 1e-06 700 10 1 5 [+] picture button
ENSDART00000078524 NOT ANNOTATED
16.6743 -22.48 1e-06 700 10 1 6 [+] picture button
zgc:158660 ENSDART00000057867 hypothetical protein LOC791182 [Source:RefSeq_peptide;Acc:NP_001074133]
17.3257 -20.03 1.67795e-06 488 10 2 16 [+] picture button
tbc1d19 ENSDART00000025308 TBC1 domain family, member 19 [Source:RefSeq_peptide;Acc:NP_956785]
15.6602 -16.35 1.95334e-06 209 7 2 17 [+] picture button
dynll2 ENSDART00000081325 dynein, light chain, LC8-type 2 [Source:RefSeq_peptide;Acc:NP_998189]
15.7427 -18.31 2.09573e-06 461 6 2 11 [+] picture button
ccni ENSDART00000041953 cyclin I [Source:RefSeq_peptide;Acc:NP_998386]
15.9344 -17.43 2.33654e-06 969 7 1 8 [+] picture button
crh ENSDART00000038290 corticotropin releasing hormone [Source:RefSeq_peptide;Acc:NP_001007380]
15.7699 -20.56 3.09128e-06 440 5 6 12 [+] picture button
dennd4a ENSDART00000090962 DENN/MADD domain containing 4A [Source:RefSeq_peptide;Acc:NP_001074458]
15.6509 -20.78 4.02425e-06 700 9 1 14 [+] picture button
XR_029399.1 ENSDART00000088408 similar to Cdc42 guanine nucleotide exchange factor (GEF) 9, (LOC559868), mRNA [Source:RefSeq_dna;Acc:XR_029399]
15.5397 -13.51 9.02347e-06 700 5 1 5 [+] picture button
ENSDART00000058448 zinc finger protein 650 [Source:MarkerSymbol;Acc:MGI:1916045]zinc finger protein 650 [Source:MarkerSymbol;Acc:MGI:1916045] BY ORTHOLOGY TO:ENSMUST00000050458
16.3617 -18.81 9.30891e-06 700 8 2 12 [+] picture button
LOC569679 ENSDART00000088884 Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15) (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3) (Deubiquitinating enzyme 3). [Source:Uniprot/SWISSPROT;Acc:Q9Y6I4]Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15) (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3) (Deubiquitinating enzyme 3). [Source:Uniprot/SWISSPROT;Acc:Q9Y6I4] BY ORTHOLOGY TO:ENSGALT00000005420
15.6771 -18.84 1.10841e-05 700 3 7 4 [+] picture button
ddx54 ENSDART00000097174 ATP-dependent RNA helicase [Source:RefSeq_peptide;Acc:NP_775375]
16.211 -19.54 1.23539e-05 700 8 1 8 [+] picture button
NP_001077039.1 ENSDART00000102779 hypothetical protein LOC798009 [Source:RefSeq_peptide;Acc:NP_001077039]
17.6034 -16.45 1.29777e-05 92 3 2 5 [+] picture button
hlcs ENSDART00000058411 Hlcs protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:A0JMJ9]
15.4452 -16.61 1.4556e-05 700 6 1 11 [+] picture button
NP_060460.3 ENSDART00000037042 pyruvate dehydrogenase phosphatase regulatory subunit [Source:RefSeq_peptide;Acc:NP_060460]
16.9646 -18 2.14273e-05 700 9 1 6 [+] picture button
MIPOL1 ENSDART00000105266 Mirror-image polydactyly gene 1 protein. [Source:Uniprot/SWISSPROT;Acc:Q8TD10]
15.7744 -15.61 2.45909e-05 700 8 1 10 [+] picture button
zgc:77531 ENSDART00000018202 SAPK substrate protein 1. [Source:Uniprot/SWISSPROT;Acc:Q6NXA9]
18.0606 -21.73 2.76415e-05 293 7 1 14 [+] picture button
LOC572113 ENSDART00000013257 hypothetical protein LOC535219 [Source:RefSeq_peptide;Acc:NP_001070377]hypothetical protein LOC535219 [Source:RefSeq_peptide;Acc:NP_001070377] BY ORTHOLOGY TO:ENSBTAT00000009388
16.7766 -19.3 3.61801e-05 700 3 14 7 [+] picture button
si:ch211-238c15.1 ENSDART00000006078 lysyl oxidase-like 1 [Source:RefSeq_peptide;Acc:NP_001036790]
17.1462 -22.82 3.68654e-05 144 7 2 10 [+] picture button
XR_028952.1 ENSDART00000097540 hypothetical protein LOC793026 (LOC793026), mRNA [Source:RefSeq_dna;Acc:XR_028952]
17.508 -24.05 4.1711e-05 700 5 1 7 [+] picture button
LOC562032 ENSDART00000051166 Growth factor receptor-bound protein 10 (GRB10 adaptor protein) (Insulin receptor-binding protein GRB-IR). [Source:Uniprot/SWISSPROT;Acc:Q13322]Growth factor receptor-bound protein 10 (GRB10 adaptor protein) (Insulin receptor-binding protein GRB-IR). [Source:Uniprot/SWISSPROT;Acc:Q13322] BY ORTHOLOGY TO:SINFRUT00000169116
16.1026 -18.88 4.46776e-05 700 7 4 14 [+] picture button
LOC793242 ENSDART00000106039 CDNA FLJ41603 fis, clone CTONG3000657. [Source:Uniprot/SPTREMBL;Acc:Q6ZW51]CDNA FLJ41603 fis, clone CTONG3000657. [Source:Uniprot/SPTREMBL;Acc:Q6ZW51] BY ORTHOLOGY TO:SINFRUT00000136718
16.5701 -18.53 4.6086e-05 700 9 2 11 [+] picture button
pouc ENSDART00000011925 POU domain protein C (POU[C]) (ZFPOU[C]). [Source:Uniprot/SWISSPROT;Acc:P31367]
15.5994 -16.18 4.7934e-05 932 4 1 5 [+] picture button
OSBPL1A (1 of 2) ENSDART00000075837 Oxysterol-binding protein-related protein 1 (OSBP-related protein 1) (ORP-1). [Source:Uniprot/SWISSPROT;Acc:Q9BXW6]
15.8061 -15.87 4.83116e-05 700 6 2 8 [+] picture button
LOC560384 ENSDART00000043864 muscleblind-like X-linked protein [Source:RefSeq_peptide;Acc:NP_001027847]muscleblind-like X-linked protein [Source:RefSeq_peptide;Acc:NP_001027847] BY ORTHOLOGY TO:SINFRUT00000180599
15.794 -17.16 4.94264e-05 700 6 2 10 [+] picture button
cpox ENSDART00000089172 coproporphyrinogen oxidase [Source:RefSeq_peptide;Acc:NP_001035183]
16.8611 -23.24 5.31882e-05 559 6 2 12 [+] picture button
STAMBPL1 ENSDART00000003863 AMSH-like protease (EC 3.1.2.15) (AMSH-LP) (STAM-binding protein-like 1). [Source:Uniprot/SWISSPROT;Acc:Q96FJ0]
15.5223 -19.3 5.98488e-05 700 4 1 4 [+] picture button
zgc:153946 ENSDART00000101671 hypothetical protein LOC556495 [Source:RefSeq_peptide;Acc:NP_001071009]
16.4757 -21.25 6.34555e-05 887 3 1 4 [+] picture button
atad1b ENSDART00000079130 ATPase family AAA domain-containing protein 1-B. [Source:Uniprot/SWISSPROT;Acc:Q503W7]
15.8596 -21.74 6.7374e-05 700 6 1 9 [+] picture button
prmt7 ENSDART00000073609 Protein arginine N-methyltransferase 7. [Source:Uniprot/SPTREMBL;Acc:A2AV36]
16.8827 -14.65 6.73868e-05 700 7 3 10 [+] picture button
si:dkeyp-95d10.1 ENSDART00000004842 hypothetical protein LOC323834 [Source:RefSeq_peptide;Acc:NP_001034709]
15.6137 -17.51 7.13815e-05 514 5 1 6 [+] picture button
NP_001077297.1 ENSDART00000028854 hypothetical protein LOC559477 [Source:RefSeq_peptide;Acc:NP_001077297]
15.4316 -13.61 7.25125e-05 230 7 2 11 [+] picture button
dlst ENSDART00000016614 dihydrolipoamide S-succinyltransferase [Source:RefSeq_peptide;Acc:NP_958895]
16.1257 -26.92 7.43433e-05 461 5 1 7 [+] picture button
pcqap ENSDART00000021997 positive cofactor 2 glutamine/Q-rich-associated protein [Source:RefSeq_peptide;Acc:NP_998238]
16.6889 -16.82 7.55775e-05 168 5 1 13 [+] picture button
Q568T9_DANRE ENSDART00000009197 LOC553360 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q568T9]
16.7857 -17.93 8.66195e-05 700 7 4 15 [+] picture button
im:7145180 ENSDART00000105881 Im:7145180 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q569P3]
15.5459 -14.1 8.70415e-05 189 7 2 11 [+] picture button
si:ch211-234f14.1 ENSDART00000102888 Novel protein similar to vertebrate cyclin-dependent kinase 6 (CDK6) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1L915]
17.0332 -20.39 8.77263e-05 700 9 1 13 [+] picture button
LOC565088 ENSDART00000086511 RNA pseudouridylate synthase domain containing 2 [Source:RefSeq_peptide;Acc:NP_689473]RNA pseudouridylate synthase domain containing 2 [Source:RefSeq_peptide;Acc:NP_689473] BY ORTHOLOGY TO:ENSOANT00000017844
16.2326 -23.56 8.80178e-05 700 9 1 8 [+] picture button
mrpl19 ENSDART00000018049 mitochondrial ribosomal protein L19 [Source:RefSeq_peptide;Acc:NP_001003544]
16.203 -18.67 9.49671e-05 390 7 2 11 [+] picture button
zgc:136338 ENSDART00000078947 hypothetical protein LOC553439 [Source:RefSeq_peptide;Acc:NP_001036219]
15.5165 -20.7 9.49799e-05 457 9 3 16 [+] picture button
LOC560371 ENSDART00000082965 Active breakpoint cluster region-related protein. [Source:Uniprot/SWISSPROT;Acc:Q12979]Active breakpoint cluster region-related protein. [Source:Uniprot/SWISSPROT;Acc:Q12979] BY ORTHOLOGY TO:ENSXETT00000017574
15.6322 -17.07 9.97568e-05 700 7 1 7 [+] picture button
A3KNL1_DANRE ENSDART00000098952 Hypothetical protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:A3KNL1]
15.4948 -21.13 0.000100314 700 5 1 5 [+] picture button
A3KNL1_DANRE ENSDART00000058879 Hypothetical protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:A3KNL1]
16.338 -13.9 0.000100314 700 5 1 6 [+] picture button
twist1a ENSDART00000043595 twist1a [Source:RefSeq_peptide;Acc:NP_571059]
16.4579 -17.89 0.000101573 519 11 1 12 [+] picture button
zgc:153241 ENSDART00000082940 hypothetical protein LOC767721 [Source:RefSeq_peptide;Acc:NP_001070127]
18.6642 -25.67 0.000104739 530 12 1 15 [+] picture button
zgc:77004 ENSDART00000014753 hypothetical protein LOC406608 [Source:RefSeq_peptide;Acc:NP_998481]
15.6065 -18.43 0.000106075 667 7 1 9 [+] picture button
eef1d ENSDART00000002962 Eef1d protein. [Source:Uniprot/SPTREMBL;Acc:Q4V9J7]
15.5459 -12.94 0.000106267 91 2 4 6 [+] picture button
SPATS2 ENSDART00000098000 spermatogenesis associated, serine-rich 2 [Source:RefSeq_peptide;Acc:NP_075559]
15.8854 -17.7 0.00011221 700 12 3 13 [+] picture button

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Download table: GFF TXT
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