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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-129*

658 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
picture button picture button picture button picture button picture button picture button picture button picture button picture button picture button
LOC558892 ENSDART00000074244 NOT ANNOTATED
16.9277 -21.12 1e-06 700 14 1 8 [+] picture button
zgc:112064 ENSDART00000100746 hypothetical protein LOC550344 [Source:RefSeq_peptide;Acc:NP_001017651]
15.8417 -11.89 6.87046e-05 487 8 1 7 [+] picture button
zgc:162777 ENSDART00000091787 hypothetical protein LOC557469 [Source:RefSeq_peptide;Acc:NP_001038293]
15.2879 -23.48 7.82276e-05 1349 7 3 6 [+] picture button
LOC558967 ENSDART00000098423 NOT ANNOTATED
15.0382 -11.71 9.78515e-05 700 4 1 3 [+] picture button
zgc:101630 ENSDART00000102629 hypothetical protein LOC447900 [Source:RefSeq_peptide;Acc:NP_001004638]
15.1225 -12.15 0.000376481 196 6 2 12 [+] picture button
zgc:110354 ENSDART00000063272 hypothetical protein LOC553612 [Source:RefSeq_peptide;Acc:NP_001018422]
16.487 -12.22 0.0004421 356 6 1 9 [+] picture button
ENSDART00000106521 NOT ANNOTATED
16.4901 -23.98 0.000466989 700 6 1 4 [+] picture button
mt-nd6 ENSDART00000093623 NADH-ubiquinone oxidoreductase chain 6 (EC 1.6.5.3) (NADH dehydrogenase subunit 6). [Source:Uniprot/SWISSPROT;Acc:Q9MIX9]
15.0382 -19.77 0.000506516 700 6 2 7 [+] picture button
orc3l ENSDART00000047857 origin recognition complex, subunit 3-like protein [Source:RefSeq_peptide;Acc:NP_997892]
15.658 -24.62 0.000685958 700 9 1 11 [+] picture button
zgc:63466 ENSDART00000105288 hypothetical protein LOC393404 [Source:RefSeq_peptide;Acc:NP_956726]
15.7197 -18.06 0.000733358 700 2 1 2 [+] picture button
nfatc2ip ENSDART00000011320 Nfatc2ip protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5BLI6]
18.4715 -26.37 0.00077299 309 9 2 15 [+] picture button
LOC571588 ENSDART00000102047 NOT ANNOTATED
15.681 -15.5 0.000809193 700 9 1 9 [+] picture button
myo5b ENSDART00000089030 Novel protein similar to vertebrate myosin V family (Myo5) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1LWT9]
15.9149 -11.91 0.000915298 700 5 1 5 [+] picture button
zgc:92307 ENSDART00000081666 hypothetical protein LOC436873 [Source:RefSeq_peptide;Acc:NP_001002600]
16.5661 -14.46 0.000985326 389 8 1 10 [+] picture button
NP_998007.1 ENSDART00000065551 protein kinase Npk [Source:RefSeq_peptide;Acc:NP_998007]
15.9185 -10.93 0.000993376 290 7 1 9 [+] picture button
zgc:77825 ENSDART00000041993 hypothetical protein LOC402940 [Source:RefSeq_peptide;Acc:NP_991206]
19.3295 -25.69 0.00107778 254 8 1 14 [+] picture button
zgc:64006 ENSDART00000073784 regulator of G-protein signaling 5 [Source:RefSeq_peptide;Acc:NP_956256]
16.5348 -19.64 0.00109145 700 9 1 9 [+] picture button
NUP210 (1 of 2) ENSDART00000092389 Nuclear pore membrane glycoprotein 210 precursor (POM210) (Nuclear pore protein gp210). [Source:Uniprot/SWISSPROT;Acc:Q8TEM1]
16.905 -21.12 0.00112147 700 6 1 10 [+] picture button
LOC100004973 ENSDART00000055903 NOT ANNOTATED
15.269 -13.07 0.0011276 700 5 1 5 [+] picture button
DYRK3 (1 of 2) ENSDART00000103840 Dual specificity tyrosine-phosphorylation-regulated kinase 3 (EC 2.7.12.1). [Source:Uniprot/SWISSPROT;Acc:O43781]
15.5918 -13.93 0.00132671 700 6 1 5 [+] picture button
DYRK3 (2 of 2) ENSDART00000103851 Dual specificity tyrosine-phosphorylation-regulated kinase 3 (EC 2.7.12.1). [Source:Uniprot/SWISSPROT;Acc:O43781]
15.5823 -13.93 0.00134813 700 5 1 3 [+] picture button
zgc:112064 ENSDART00000036985 hypothetical protein LOC550344 [Source:RefSeq_peptide;Acc:NP_001017651]
15.2456 -11.89 0.00140796 700 7 1 7 [+] picture button
LOC556848 ENSDART00000041721 Absent in melanoma 1 protein. [Source:Uniprot/SWISSPROT;Acc:Q9Y4K1]Absent in melanoma 1 protein. [Source:Uniprot/SWISSPROT;Acc:Q9Y4K1] BY ORTHOLOGY TO:ENSORLT00000022320
15.1419 -11.89 0.00140796 700 4 1 3 [+] picture button
zgc:63548 ENSDART00000079419 hypothetical protein LOC393574 [Source:RefSeq_peptide;Acc:NP_956896]
15.4925 -20.1 0.00157924 700 8 1 10 [+] picture button
zgc:158635 ENSDART00000102760 hypothetical protein LOC791217 [Source:RefSeq_peptide;Acc:NP_001074168]
15.4098 -13.77 0.00160575 700 6 1 8 [+] picture button
ENSDART00000100874 Homolog of Brachydanio rerio "Netrin-1a. [Source:Uniprot/SPTREMBL;Acc:O42140]"Homolog of Brachydanio rerio "Netrin-1a. [Source:Uniprot/SPTREMBL;Acc:O42140]" BY ORTHOLOGY TO:SINFRUT00000158828
17.3198 -20.06 0.00168821 700 11 1 9 [+] picture button
cox5a ENSDART00000011435 Mg:cb01f09 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6PBX0]
15.691 -15.43 0.00180817 164 4 1 6 [+] picture button
zgc:92241 ENSDART00000022839 Small ubiquitin-related modifier 2 precursor (SUMO-2). [Source:Uniprot/SWISSPROT;Acc:Q6DHL4]
14.8765 -12.3 0.00186772 504 9 1 12 [+] picture button
hspd1 ENSDART00000078595 heat shock 60 kD protein 1 [Source:RefSeq_peptide;Acc:NP_851847]
14.89 -11 0.00220691 446 11 1 12 [+] picture button
cpvl ENSDART00000078984 carboxypeptidase, vitellogenic-like [Source:RefSeq_peptide;Acc:NP_954972]
18.5336 -16.6 0.00223605 201 6 1 11 [+] picture button
zgc:55572 ENSDART00000005906 hypothetical protein LOC406765 [Source:RefSeq_peptide;Acc:NP_998621]
15.2773 -12.64 0.00225479 835 3 1 2 [+] picture button
daxx ENSDART00000093181 hypothetical protein LOC561006 [Source:RefSeq_peptide;Acc:NP_001038414]
15.1419 -17.24 0.00230872 700 6 1 7 [+] picture button
LOC795256 ENSDART00000052356 NOT ANNOTATED
15.0584 -15.3 0.00233923 700 4 1 3 [+] picture button
zgc:91816 ENSDART00000083367 hypothetical protein LOC436967 [Source:RefSeq_peptide;Acc:NP_001002694]
14.8264 -16.12 0.00241044 1386 5 1 4 [+] picture button
LOC100007341 ENSDART00000058418 NOT ANNOTATED
14.727 -13.02 0.00242065 700 4 1 4 [+] picture button
zgc:152741 ENSDART00000043239 hypothetical protein LOC566165 [Source:RefSeq_peptide;Acc:NP_001068582]
16.0049 -16.26 0.00262395 391 6 1 5 [+] picture button
pabpn1 ENSDART00000066722 polyadenylate-binding protein nuclear 1 [Source:RefSeq_peptide;Acc:NP_998424]
15.6612 -12.9 0.00275121 520 7 1 8 [+] picture button
zgc:113030 ENSDART00000080437 hypothetical protein LOC553738 [Source:RefSeq_peptide;Acc:NP_001018545]
15.0382 -12.28 0.00289422 700 7 1 6 [+] picture button
LOC569270 ENSDART00000103489 Centromere protein S (CENP-S) (Apoptosis-inducing TAF9-like domain- containing protein 1). [Source:Uniprot/SWISSPROT;Acc:Q8N2Z9]Centromere protein S (CENP-S) (Apoptosis-inducing TAF9-like domain- containing protein 1). [Source:Uniprot/SWISSPROT;Acc:Q8N2Z9] BY ORTHOLOGY TO:SINFRUT00000147277
15.543 -21.74 0.00299106 700 6 1 5 [+] picture button
cth ENSDART00000104198 cystathionase (cystathionine gamma-lyase) [Source:RefSeq_peptide;Acc:NP_997769]
15.0382 -12.06 0.00299497 700 8 2 9 [+] picture button
pptc7 ENSDART00000015214 PTC7 protein phosphatase homolog [Source:RefSeq_peptide;Acc:NP_001007379]
16.3731 -16.36 0.00312383 339 6 4 9 [+] picture button
A2BEN0_DANRE ENSDART00000098990 Novel protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:A2BEN0]
14.6742 -12.75 0.0031708 700 6 1 9 [+] picture button
zgc:101740 ENSDART00000024204 hypothetical protein LOC447889 [Source:RefSeq_peptide;Acc:NP_001004628]
15.9185 -12.79 0.00325933 215 2 1 3 [+] picture button
zgc:123248 ENSDART00000075989 hypothetical protein LOC641571 [Source:RefSeq_peptide;Acc:NP_001032658]
15.1225 -15.81 0.00325933 338 6 1 9 [+] picture button
zgc:92423 ENSDART00000055834 Probable phosphatase phospho1 (EC 3.1.3.-). [Source:Uniprot/SWISSPROT;Acc:Q6DBV4]
15.1225 -12.66 0.00325933 207 4 1 9 [+] picture button
im:7139045 ENSDART00000077413 similar to protein kinase C, alpha type (LOC100001176), mRNA [Source:RefSeq_dna;Acc:XR_029675]
14.9345 -13.76 0.00331101 700 6 1 5 [+] picture button
ENSDART00000097158 NOT ANNOTATED
15.8095 -15.46 0.00331147 700 3 1 3 [+] picture button
zgc:162166 ENSDART00000104151 hypothetical protein LOC100005551 [Source:RefSeq_peptide;Acc:NP_001077050]
16.8546 -15.92 0.00331453 700 5 1 5 [+] picture button
vrk1 ENSDART00000045991 Serine/threonine-protein kinase VRK1 (EC 2.7.11.1) (Vaccinia-related kinase 1). [Source:Uniprot/SWISSPROT;Acc:Q7ZUS1]
14.8485 -18.58 0.00335577 700 6 1 7 [+] picture button
ENSDART00000093331 NOT ANNOTATED
18.0701 -18.57 0.00341865 700 4 1 5 [+] picture button

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Download table: GFF TXT
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