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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-129

623 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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pwp2h ENSDART00000053935 PWP2 periodic tryptophan protein homolog [Source:RefSeq_peptide;Acc:NP_998212]
17.2161 -24.31 5.10233e-07 700 3 2 3 [+] picture button
zgc:92279 ENSDART00000011652 zgc:92279 (zgc:92279), mRNA [Source:RefSeq_dna;Acc:NM_001004558]
16.3864 -14.16 3.05451e-06 700 4 3 6 [+] picture button
LOC561532 ENSDART00000027288 Pannexin-3. [Source:Uniprot/SWISSPROT;Acc:Q96QZ0]Pannexin-3. [Source:Uniprot/SWISSPROT;Acc:Q96QZ0] BY ORTHOLOGY TO:ENSMODT00000004600
16.3175 -14.3 4.89614e-06 700 6 3 9 [+] picture button
LOC100002448 ENSDART00000074359 Macrophage-stimulating protein receptor precursor (EC 2.7.10.1) (MSP receptor) (p185-Ron) (CD136 antigen) (CDw136) [Contains: Macrophage- stimulating protein receptor alpha chain; Macrophage-stimulating protein receptor beta chain]. [Source:Uniprot/SWISSPROT;Acc:Q04912]Macrophage-stimulating protein receptor precursor (EC 2.7.10.1) (MSP receptor) (p185-Ron) (CD136 antigen) (CDw136) [Contains: Macrophage- stimulating protein receptor alpha chain; Macrophage-stimulating protein receptor beta chain]. [Source:Uniprot/SWISSPROT;Acc:Q04912] BY ORTHOLOGY TO:ENSOANT00000005603
17.3198 -19.12 4.97005e-06 700 2 1 4 [+] picture button
mgll ENSDART00000053463 monoglyceride lipase [Source:RefSeq_peptide;Acc:NP_956591]
16.4076 -15.83 1.01044e-05 622 4 1 4 [+] picture button
nkx2.3 ENSDART00000057094 NK2 transcription factor related 3 [Source:RefSeq_peptide;Acc:NP_571498]
16.5672 -21.5 1.30516e-05 381 6 1 7 [+] picture button
si:ch211-285p6.1 ENSDART00000104008 hypothetical protein LOC556784 [Source:RefSeq_peptide;Acc:NP_001038279]
16.6007 -19.8 1.31682e-05 196 6 2 11 [+] picture button
LOC564856 ENSDART00000045809 Sushi repeat-containing protein SRPX2 precursor. [Source:Uniprot/SWISSPROT;Acc:O60687]Sushi repeat-containing protein SRPX2 precursor. [Source:Uniprot/SWISSPROT;Acc:O60687] BY ORTHOLOGY TO:ENSXETT00000014699
16.5502 -17.16 1.60522e-05 700 6 3 8 [+] picture button
zgc:100786 ENSDART00000009473 hypothetical protein LOC445257 [Source:RefSeq_peptide;Acc:NP_001003651]
18.4199 -19.97 1.61282e-05 135 5 2 10 [+] picture button
SLC29A1 (2 of 2) ENSDART00000023151 Equilibrative nucleoside transporter 1 (Equilibrative nitrobenzylmercaptopurine riboside-sensitive nucleoside transporter) (Equilibrative NBMPR-sensitive nucleoside transporter) (Nucleoside transporter, es-type) (Solute carrier family 29 member 1). [Source:Uniprot/SWISSPROT;Acc:Q99808]
17.285 -19.47 1.62582e-05 700 3 1 1 [+] picture button
zgc:103570 ENSDART00000060954 hypothetical protein LOC492460 [Source:RefSeq_peptide;Acc:NP_001007333]
16.5473 -15.38 1.67326e-05 700 8 1 11 [+] picture button
zgc:153126 ENSDART00000100367 hypothetical protein LOC777608 [Source:RefSeq_peptide;Acc:NP_001071184]
16.3733 -9.77 2.83636e-05 296 10 2 16 [+] picture button
zgc:56548 ENSDART00000032766 zgc:56548 (zgc:56548), mRNA [Source:RefSeq_dna;Acc:NM_201014]
17.1562 -22.39 3.97298e-05 700 6 1 9 [+] picture button
zgc:153260 ENSDART00000103220 hypothetical protein LOC751643 [Source:RefSeq_peptide;Acc:NP_001038827]
16.1459 -14.56 5.75043e-05 228 12 2 15 [+] picture button
epb4.1l4 ENSDART00000058627 Band 4.1-like protein 4 (Protein Nbl4). [Source:Uniprot/SWISSPROT;Acc:O57457]
16.2714 -15.7 6.02325e-05 431 7 2 11 [+] picture button
LOC797363 ENSDART00000090721 NOT ANNOTATED
16.4561 -13.98 6.41018e-05 700 3 1 3 [+] picture button
smyd1b ENSDART00000081421 SET and MYND domain containing 1b [Source:RefSeq_peptide;Acc:NP_001034725]
16.1376 -17.53 7.5417e-05 700 5 1 9 [+] picture button
zgc:113360 ENSDART00000076518 hypothetical protein LOC571922 [Source:RefSeq_peptide;Acc:NP_001030161]
17.0555 -12.2 7.66264e-05 354 7 2 14 [+] picture button
zgc:92127 ENSDART00000079255 hypothetical protein LOC447856 [Source:RefSeq_peptide;Acc:NP_001004595]
16.7743 -10.61 7.76656e-05 369 7 1 8 [+] picture button
zgc:110783 ENSDART00000103493 MOSC domain-containing protein 1, mitochondrial precursor (EC 1.-.-.-). [Source:Uniprot/SWISSPROT;Acc:Q58EJ9]
17.3429 -18.03 7.98332e-05 700 9 1 12 [+] picture button
P25A_HUMAN ENSDART00000097289 Tubulin polymerization-promoting protein (TPPP) (25 kDa brain-specific protein) (p25-alpha) (p24) (p25). [Source:Uniprot/SWISSPROT;Acc:O94811]
17.9421 -21.2 8.80637e-05 700 5 1 5 [+] picture button
zgc:162943 ENSDART00000092497 hypothetical protein LOC336363 [Source:RefSeq_peptide;Acc:NP_001082812]
16.8281 -20.45 0.000104509 228 3 2 3 [+] picture button
zgc:154079 ENSDART00000088329 hypothetical protein LOC777750 [Source:RefSeq_peptide;Acc:NP_001071260]
17.624 -15.06 0.000108804 267 7 4 10 [+] picture button
copb1 ENSDART00000079042 coatomer protein complex, subunit beta 1 [Source:RefSeq_peptide;Acc:NP_001002013]
18.4199 -19.56 0.000128076 293 9 2 16 [+] picture button
zgc:158663 ENSDART00000105917 OHCU decarboxylase [Source:RefSeq_peptide;Acc:NP_001073641]
16.8281 -15.9 0.000140133 180 3 2 6 [+] picture button
zgc:153024 ENSDART00000098431 hypothetical protein LOC768195 [Source:RefSeq_peptide;Acc:NP_001070805]
16.1129 -8.08 0.000146044 351 5 3 8 [+] picture button
zgc:91910 ENSDART00000051749 hypothetical protein LOC445276 [Source:RefSeq_peptide;Acc:NP_001003731]
16.1074 -8.52 0.000166039 598 7 1 8 [+] picture button
ZBTB48 ENSDART00000104021 Zinc finger and BTB domain-containing protein 48 (Krueppel-related zinc finger protein 3) (Protein HKR3). [Source:Uniprot/SWISSPROT;Acc:P10074]
16.3046 -18.6 0.00018977 700 8 3 9 [+] picture button
meis1 ENSDART00000102576 myeloid ecotropic viral integration 1 [Source:RefSeq_peptide;Acc:NP_571968]
16.8239 -18.93 0.00020851 700 4 3 4 [+] picture button
zgc:56581 ENSDART00000053847 RAD51-like 1 [Source:RefSeq_peptide;Acc:NP_998577]
17.4443 -15.4 0.000216859 700 6 2 6 [+] picture button
egr1 ENSDART00000054460 Early growth response protein 1 (EGR-1) (Krox24). [Source:Uniprot/SWISSPROT;Acc:P26632]
17.029 -21.87 0.000233573 700 4 4 10 [+] picture button
nfatc2ip ENSDART00000011320 Nfatc2ip protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5BLI6]
18.0183 -14.04 0.000257619 309 9 2 15 [+] picture button
mak ENSDART00000082362 male germ cell-associated kinase [Source:RefSeq_peptide;Acc:NP_956240]
16.8653 -19.47 0.000280607 700 4 1 4 [+] picture button
zgc:154046 ENSDART00000098567 hypothetical protein LOC562075 [Source:RefSeq_peptide;Acc:NP_001073466]
16.905 -15.44 0.000283872 700 9 1 10 [+] picture button
zgc:136229 ENSDART00000053838 hypothetical protein LOC692284 [Source:RefSeq_peptide;Acc:NP_001038722]
17.624 -19.84 0.00031536 249 8 5 13 [+] picture button
zgc:158428 ENSDART00000061406 hypothetical protein LOC790924 [Source:RefSeq_peptide;Acc:NP_001073539]
18.0788 -14.22 0.000332206 270 7 2 12 [+] picture button
dap1b ENSDART00000053568 death associated protein 1b [Source:RefSeq_peptide;Acc:NP_571648]
17.0007 -14.78 0.000334524 700 9 5 11 [+] picture button
MYO7B ENSDART00000065268 myosin VIIB [Source:RefSeq_peptide;Acc:NP_001073996]
17.9737 -22.56 0.000337266 700 7 2 6 [+] picture button
mecp2 ENSDART00000040672 methyl CpG binding protein 2 [Source:RefSeq_peptide;Acc:NP_997901]
17.2829 -16.98 0.000353358 98 2 2 3 [+] picture button
lhx2 ENSDART00000033846 LIM homeobox protein 2b [Source:RefSeq_peptide;Acc:NP_001035099]
17.7377 -16.41 0.000364849 86 1 1 2 [+] picture button
agpat4 ENSDART00000100156 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) [Source:RefSeq_peptide;Acc:NP_998157]
16.3928 -22.43 0.000367606 522 9 1 11 [+] picture button
LOC569053 ENSDART00000075412 LPP1_RAT Isoform 2 of O08564 - Rattus norvegicus (Rat) [Source:Uniprot/Varsplic;Acc:O08564-2]LPP1_RAT Isoform 2 of O08564 - Rattus norvegicus (Rat) [Source:Uniprot/Varsplic;Acc:O08564-2] BY ORTHOLOGY TO:ENSRNOT00000013314
17.9421 -26.66 0.00037442 700 4 1 7 [+] picture button
gosr2 ENSDART00000075039 membrin [Source:RefSeq_peptide;Acc:NP_955982]
16.6464 -11.89 0.000394365 689 8 1 10 [+] picture button
zgc:56335 ENSDART00000030453 hypothetical protein LOC394163 [Source:RefSeq_peptide;Acc:NP_957482]
16.8124 -9.31 0.000394876 329 8 2 9 [+] picture button
zgc:153136 ENSDART00000101559 hypothetical protein LOC562439 [Source:RefSeq_peptide;Acc:NP_001070626]
17.6716 -20.81 0.000416678 700 5 1 6 [+] picture button
CLP1 ENSDART00000093232 Pre-mRNA cleavage complex II protein Clp1. [Source:Uniprot/SWISSPROT;Acc:Q92989]
16.905 -14.93 0.000425983 700 3 1 4 [+] picture button
LOC555425 ENSDART00000085964 Armadillo repeat-containing protein 6. [Source:Uniprot/SWISSPROT;Acc:Q6NXE6]Armadillo repeat-containing protein 6. [Source:Uniprot/SWISSPROT;Acc:Q6NXE6] BY ORTHOLOGY TO:ENSMODT00000005066
16.7403 -12.04 0.000443911 700 5 1 7 [+] picture button
thex1 ENSDART00000065671 three prime histone mRNA exonuclease 1 [Source:RefSeq_peptide;Acc:NP_001018450]
16.4005 -16.36 0.000445249 334 10 2 16 [+] picture button
pde6c ENSDART00000080713 phosphodiesterase 6C, cGMP-specific, cone, alpha prime [Source:RefSeq_peptide;Acc:NP_957165]
17.1124 -16.5 0.000449282 700 12 2 14 [+] picture button
si:dkey-110c1.9 ENSDART00000088542 Novel protein similar to vertebrate myosin VA (Heavy polypeptide 12, myoxin) (MYO5A) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1LYH2]
16.3268 -12.9 0.00048259 700 6 1 6 [+] picture button

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Download table: GFF TXT
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