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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-128

766 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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zgc:109926 ENSDART00000078824 hypothetical protein LOC554231 [Source:RefSeq_peptide;Acc:NP_001025247]
16.2918 -20.62 0.00000000591347 902 5 6 6 [+] picture button
PDE3B ENSDART00000089640 cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B) (CGIPDE1) (CGIP1). [Source:Uniprot/SWISSPROT;Acc:Q13370]
16.7197 -19.15 0.000000027152 700 7 11 8 [+] picture button
zgc:63992 ENSDART00000033949 hypothetical protein LOC393328 [Source:RefSeq_peptide;Acc:NP_956651]
15.6769 -15.72 0.0000000718924 424 6 3 10 [+] picture button
LOC566014 ENSDART00000083537 RIKEN cDNA 1300010M03 gene [Source:MarkerSymbol;Acc:MGI:1915248]RIKEN cDNA 1300010M03 gene [Source:MarkerSymbol;Acc:MGI:1915248] BY ORTHOLOGY TO:ENSMUST00000017946
15.6791 -16.25 0.000000112374 700 4 5 7 [+] picture button
rps7 ENSDART00000062436 40S ribosomal protein S7. [Source:Uniprot/SWISSPROT;Acc:P62084]
15.6605 -14.87 0.00000105692 700 7 1 7 [+] picture button
LOC796432 ENSDART00000063959 Protein FAM102A. [Source:Uniprot/SWISSPROT;Acc:Q5T9C2]Protein FAM102A. [Source:Uniprot/SWISSPROT;Acc:Q5T9C2] BY ORTHOLOGY TO:ENST00000300434
16.045 -13.27 0.00000223378 700 7 1 11 [+] picture button
acat2 ENSDART00000006778 acetyl-CoA acetyltransferase 2 [Source:RefSeq_peptide;Acc:NP_571445]
15.9329 -19.32 0.00000534143 673 12 1 17 [+] picture button
fnbp1l ENSDART00000045038 formin binding protein 1-like [Source:RefSeq_peptide;Acc:NP_001003634]
17.7377 -18.08 0.000005801 247 6 2 10 [+] picture button
exosc8 ENSDART00000099552 exosome component 8 [Source:RefSeq_peptide;Acc:NP_001002865]
16.3733 -11.78 0.00000878933 111 2 5 3 [+] picture button
si:ch211-250g4.1 ENSDART00000103151 hypothetical protein LOC557556 [Source:RefSeq_peptide;Acc:NP_001038179]
17.3439 -17.69 0.0000095423 700 11 1 14 [+] picture button
LOC563979 ENSDART00000045684 Porcupine homolog. [Source:Uniprot/SPTREMBL;Acc:Q6P2X7]Porcupine homolog. [Source:Uniprot/SPTREMBL;Acc:Q6P2X7] BY ORTHOLOGY TO:ENSXETT00000017366
16.6976 -19.22 0.0000101255 700 6 2 9 [+] picture button
crsp7 ENSDART00000003801 cofactor required for Sp1 transcriptional activation, subunit 7 [Source:RefSeq_peptide;Acc:NP_998224]
16.1521 -16.1 0.0000123733 383 10 9 19 [+] picture button
zgc:110140 ENSDART00000011539 hypothetical protein LOC550555 [Source:RefSeq_peptide;Acc:NP_001017857]
15.7726 -14.72 0.0000137228 819 5 1 5 [+] picture button
RHOT2 ENSDART00000105623 Mitochondrial Rho GTPase 2 (EC 3.6.5.-) (MIRO-2) (hMiro-2) (Ras homolog gene family member T2). [Source:Uniprot/SWISSPROT;Acc:Q8IXI1]
16.4134 -19.25 0.0000144732 700 6 1 8 [+] picture button
prkcsh ENSDART00000023814 protein kinase C substrate 80K-H [Source:RefSeq_peptide;Acc:NP_957347]
17.8514 -19.87 0.0000192392 224 9 3 26 [+] picture button
itga5 ENSDART00000103275 integrin alpha 5 [Source:RefSeq_peptide;Acc:NP_001004288]
16.08 -19.58 0.0000204408 329 8 1 11 [+] picture button
ubr5 ENSDART00000035761 similar to E3 ubiquitin protein ligase, HECT domain containing, 1, (LOC100007900), partial mRNA [Source:RefSeq_dna;Acc:XR_030106]
17.9911 -22.99 0.0000243844 700 5 4 7 [+] picture button
zgc:92639 ENSDART00000044128 hypothetical protein LOC447833 [Source:RefSeq_peptide;Acc:NP_001004572]
17.7377 -21.92 0.0000267049 272 7 2 18 [+] picture button
cd36 ENSDART00000050753 CD36 antigen [Source:RefSeq_peptide;Acc:NP_001002363]
15.9185 -17.8 0.0000282271 284 9 2 15 [+] picture button
zgc:153718 ENSDART00000075197 hypothetical protein LOC751657 [Source:RefSeq_peptide;Acc:NP_001038839]
15.8711 -14.49 0.0000333182 328 3 2 4 [+] picture button
zgc:136842 ENSDART00000015323 hypothetical protein LOC678549 [Source:RefSeq_peptide;Acc:NP_001035397]
16.2113 -22.55 0.0000387676 623 9 2 9 [+] picture button
dvl2 ENSDART00000012450 dishevelled 2, dsh homolog [Source:RefSeq_peptide;Acc:NP_997813]
16.0322 -17.37 0.0000409574 278 9 5 15 [+] picture button
zgc:77068 ENSDART00000054575 hypothetical protein LOC405824 [Source:RefSeq_peptide;Acc:NP_998053]
16.093 -18.66 0.0000410256 746 7 1 9 [+] picture button
LOC100008437 ENSDART00000100212 G protein-coupled receptor 108 (GPR108), transcript variant 1, mRNA [Source:RefSeq_dna;Acc:NM_001080452]G protein-coupled receptor 108 (GPR108), transcript variant 1, mRNA [Source:RefSeq_dna;Acc:NM_001080452] BY ORTHOLOGY TO:SINFRUT00000169830
17.0316 -26.29 0.0000425405 700 6 1 6 [+] picture button
si:dkey-240a12.1 ENSDART00000007237 hypothetical protein LOC556537 [Source:RefSeq_peptide;Acc:NP_001038270]
16.3069 -14.46 0.0000452604 700 4 1 8 [+] picture button
nfil3 ENSDART00000063101 Nuclear factor interleukin-3 regulated protein. [Source:Uniprot/SWISSPROT;Acc:Q68EL6]
16.487 -14.94 0.0000464851 267 11 3 27 [+] picture button
nek2 ENSDART00000003248 NIMA (never in mitosis gene a)-related kinase 2 [Source:RefSeq_peptide;Acc:NP_957344]
17.6502 -21.18 0.0000697203 451 7 2 17 [+] picture button
zgc:158247 ENSDART00000092164 hypothetical protein LOC558841 [Source:RefSeq_peptide;Acc:NP_001073644]
15.9185 -12.48 0.0000718887 300 9 2 16 [+] picture button
gpr19 ENSDART00000060283 G protein-coupled receptor 19 [Source:RefSeq_peptide;Acc:NP_957288]
16.3936 -16.68 0.000072227 700 5 2 8 [+] picture button
cadps2 ENSDART00000103500 Cerebellum postnatal development associated protein 2 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q804Q3]
15.6449 -13.9 0.0000729893 682 5 1 7 [+] picture button
zgc:153184 ENSDART00000082914 hypothetical protein LOC751652 [Source:RefSeq_peptide;Acc:NP_001038834]
15.7741 -21.05 0.0000732117 419 4 1 4 [+] picture button
park7 ENSDART00000041531 Protein DJ-1 (zDJ-1) (Parkinson disease protein 7 homolog). [Source:Uniprot/SWISSPROT;Acc:Q5XJ36]
16.7144 -17.46 0.0000750848 266 6 3 11 [+] picture button
fxr2 ENSDART00000027718 fragile X mental retardation, autosomal homolog 2 [Source:RefSeq_peptide;Acc:NP_956505]
16.1032 -24.72 0.0000818694 1533 3 1 3 [+] picture button
A2BGV5_DANRE ENSDART00000084512 Novel protein similar to vertebrate protein kinase N1 (PKN1) (Fragment). [Source:Uniprot/SPTREMBL;Acc:A2BGV5]
17.1124 -24.2 0.0000851713 700 7 1 9 [+] picture button
zgc:101630 ENSDART00000102629 hypothetical protein LOC447900 [Source:RefSeq_peptide;Acc:NP_001004638]
16.2596 -17.01 0.0000961289 196 6 2 12 [+] picture button
spop ENSDART00000016612 Speckle-type POZ protein (HIB homolog 1) (SPOP1). [Source:Uniprot/SWISSPROT;Acc:Q7T330]
15.8845 -20.61 0.0000981955 861 6 1 6 [+] picture button
bpnt1 ENSDART00000064144 bisphosphate nucleotidase 1 [Source:RefSeq_peptide;Acc:NP_001002354]
16.0322 -12.07 0.000102594 239 6 1 10 [+] picture button
LOC567864 ENSDART00000075967 zinc finger, FYVE domain containing 26 [Source:RefSeq_peptide;Acc:NP_056161]zinc finger, FYVE domain containing 26 [Source:RefSeq_peptide;Acc:NP_056161] BY ORTHOLOGY TO:ENSMODT00000012851
16.9252 -21 0.000104903 700 8 2 8 [+] picture button
snai3 ENSDART00000073549 snail homolog 3 [Source:RefSeq_peptide;Acc:NP_001070853]
16.3917 -17.63 0.000109341 403 8 1 9 [+] picture button
zgc:123195 ENSDART00000058669 MMP37-like protein, mitochondrial precursor. [Source:Uniprot/SWISSPROT;Acc:Q3B7H2]
16.0284 -15.2 0.000113927 700 2 1 3 [+] picture button
bad ENSDART00000077219 BCL2-antagonist of cell death [Source:RefSeq_peptide;Acc:NP_571654]
15.8892 -16.99 0.000114966 700 9 2 12 [+] picture button
TRAF1 ENSDART00000101174 TNF receptor-associated factor 1 (Epstein-Barr virus-induced protein 6). [Source:Uniprot/SWISSPROT;Acc:Q13077]
16.9954 -16.77 0.000118907 700 6 1 7 [+] picture button
zgc:153064 ENSDART00000105457 Zgc:153064 protein. [Source:Uniprot/SPTREMBL;Acc:Q0P4E0]
17.9594 -21.23 0.00012613 525 4 2 4 [+] picture button
LOC561756 ENSDART00000089999 Beta-1,4-galactosyltransferase 3 (EC 2.4.1.-) (Beta-1,4-GalTase 3) (Beta4Gal-T3) (b4Gal-T3) (UDP-galactose:beta-N-acetylglucosamine beta- 1,4-galactosyltransferase 3) (UDP-Gal:beta-GlcNAc beta-1,4- galactosyltransferase 3) [Includes: N-acetyllactosamine s [Source:Uniprot/SWISSPROT;Acc:O60512]Beta-1,4-galactosyltransferase 3 (EC 2.4.1.-) (Beta-1,4-GalTase 3) (Beta4Gal-T3) (b4Gal-T3) (UDP-galactose:beta-N-acetylglucosamine beta- 1,4-galactosyltransferase 3) (UDP-Gal:beta-GlcNAc beta-1,4- galactosyltransferase 3) [Includes: N-acetyllactosamine s [Source:Uniprot/SWISSPROT;Acc:O60512] BY ORTHOLOGY TO:SINFRUT00000148278
16.8013 -21.16 0.000130523 700 6 2 7 [+] picture button
fgb ENSDART00000011701 fibrinogen, B beta polypeptide [Source:RefSeq_peptide;Acc:NP_997939]
17.2829 -18.57 0.000162473 243 7 1 11 [+] picture button
LOC798705 ENSDART00000102600 Eip93F CG18389-PA [Source:RefSeq_peptide;Acc:NP_652002]Eip93F CG18389-PA [Source:RefSeq_peptide;Acc:NP_652002] BY ORTHOLOGY TO:CG18389-RA
15.7642 -15.91 0.000173955 700 4 1 4 [+] picture button
A2BFG9_DANRE ENSDART00000087128 Novel protein. [Source:Uniprot/SPTREMBL;Acc:A2BFG9]
16.2056 -15.92 0.000174421 700 4 4 6 [+] picture button
zgc:158472 ENSDART00000092277 hypothetical protein LOC564232 [Source:RefSeq_peptide;Acc:NP_001073483]
17.3893 -22.73 0.000201935 486 6 2 8 [+] picture button
SEC31B ENSDART00000014190 SEC31 homolog B [Source:RefSeq_peptide;Acc:NP_056305]
16.6956 -18.44 0.000212975 700 8 1 15 [+] picture button
si:ch211-180b22.4 ENSDART00000074328 Novel protein similar to vertebrate dual specificity phosphatase 10 (DUSP10) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5SP01]
16.4901 -18 0.000258577 700 6 3 7 [+] picture button

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Download table: GFF TXT
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