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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-125c

923 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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zgc:66103 ENSDART00000019269 hypothetical protein LOC322814 [Source:RefSeq_peptide;Acc:NP_955915]
15.5211 -21.88 1.50361e-11 700 11 8 15 [+] picture button
prdm1 ENSDART00000017445 Blimp-1 homolog [Source:RefSeq_peptide;Acc:NP_955809]
14.8535 -18.39 2.11808e-10 1234 3 5 4 [+] picture button
zgc:154069 ENSDART00000100727 hypothetical protein LOC777767 [Source:RefSeq_peptide;Acc:NP_001071273]
15.2271 -20.46 1.57947e-09 1056 5 1 6 [+] picture button
si:ch211-146m5.2 ENSDART00000079655 si:ch211-146m5.2 (si:ch211-146m5.2), misc RNA [Source:RefSeq_dna;Acc:XR_029637]
16.3733 -18.41 5.50947e-09 234 7 1 8 [+] picture button
LOC570630 ENSDART00000087187 Eukaryotic translation initiation factor 2C 2 (eIF2C 2) (eIF-2C 2) (Argonaute-2) (Slicer protein) (PAZ Piwi domain protein) (PPD). [Source:Uniprot/SWISSPROT;Acc:Q9UKV8]Eukaryotic translation initiation factor 2C 2 (eIF2C 2) (eIF-2C 2) (Argonaute-2) (Slicer protein) (PAZ Piwi domain protein) (PPD). [Source:Uniprot/SWISSPROT;Acc:Q9UKV8] BY ORTHOLOGY TO:ENSCAFT00000001857
14.6042 -21.06 5.11528e-08 700 10 2 14 [+] picture button
si:dkey-65b13.2 ENSDART00000061843 SMEK homolog 1. [Source:Uniprot/SWISSPROT;Acc:Q5SP90]
14.7416 -18.56 2.76221e-07 1272 4 4 4 [+] picture button
LOC100005462 ENSDART00000057268 cDNA sequence AK220484 [Source:MarkerSymbol;Acc:MGI:3576497]cDNA sequence AK220484 [Source:MarkerSymbol;Acc:MGI:3576497] BY ORTHOLOGY TO:ENSRNOT00000033468
15.0382 -15.68 3.03514e-07 700 9 2 10 [+] picture button
par1 ENSDART00000097213 paraxis [Source:RefSeq_peptide;Acc:NP_571047]
16.487 -18.41 5.51799e-07 274 7 1 9 [+] picture button
zgc:123204 ENSDART00000063781 hypothetical protein LOC664762 [Source:RefSeq_peptide;Acc:NP_001035080]
15.1768 -16.45 1e-06 700 8 2 5 [+] picture button
si:dkey-94n12.3 ENSDART00000089286 hypothetical protein LOC562011 [Source:RefSeq_peptide;Acc:NP_001038438]
14.3122 -16.08 2.16252e-06 700 6 1 7 [+] picture button
zgc:158867 ENSDART00000041211 hypothetical protein LOC791129 [Source:RefSeq_peptide;Acc:NP_001074080]
15.587 -24.03 2.55015e-06 700 2 2 2 [+] picture button
GALNTL4 (1 of 2) ENSDART00000082604 Putative polypeptide N-acetylgalactosaminyltransferase-like protein 4 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase-like protein 4) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase- like protein 4) (Polypeptide GalNAc transferase-lik [Source:Uniprot/SWISSPROT;Acc:Q6P9A2]
14.727 -15.76 2.7426e-06 700 5 5 7 [+] picture button
zgc:153737 ENSDART00000100892 hypothetical protein LOC751656 [Source:RefSeq_peptide;Acc:NP_001038838]
14.8846 -18.16 3.06539e-06 700 4 1 4 [+] picture button
si:ch211-89p1.3 ENSDART00000051473 Novel protein (LOC558111). [Source:Uniprot/SPTREMBL;Acc:A2BFD2]
18.9458 -20 3.71527e-06 306 9 2 11 [+] picture button
LOC799412 ENSDART00000085351 Transient receptor potential cation channel subfamily M member 2 (EC 3.6.1.13) (Long transient receptor potential channel 2) (LTrpC2) (LTrpC-2) (Transient receptor potential channel 7) (TrpC7) (Estrogen- responsive element-associated gene 1 protein). [Source:Uniprot/SWISSPROT;Acc:O94759]Transient receptor potential cation channel subfamily M member 2 (EC 3.6.1.13) (Long transient receptor potential channel 2) (LTrpC2) (LTrpC-2) (Transient receptor potential channel 7) (TrpC7) (Estrogen- responsive element-associated gene 1 protein). [Source:Uniprot/SWISSPROT;Acc:O94759] BY ORTHOLOGY TO:ENSMMUT00000005931
15.1669 -18.27 3.76435e-06 700 3 1 6 [+] picture button
zgc:109927 ENSDART00000053482 hypothetical protein LOC553550 [Source:RefSeq_peptide;Acc:NP_001018365]
15.3493 -22.12 4.07886e-06 700 7 7 5 [+] picture button
A2BFV2_DANRE ENSDART00000078799 Novel protein similar to vertebrate major facilitator superfamily domain containing 3 (MFSD3). [Source:Uniprot/SPTREMBL;Acc:A2BFV2]
14.4375 -20.21 5.06375e-06 700 4 1 4 [+] picture button
mad1l1 ENSDART00000048610 MAD1 mitotic arrest deficient-like 1 [Source:RefSeq_peptide;Acc:NP_957206]
14.9454 -20.15 5.48773e-06 365 7 2 13 [+] picture button
sox7 ENSDART00000081482 SRY (sex determining region Y)-box 7 [Source:RefSeq_peptide;Acc:NP_001074219]
15.3457 -19.36 7.25204e-06 602 9 5 10 [+] picture button
apeh ENSDART00000098031 acylpeptide hydrolase [Source:RefSeq_peptide;Acc:NP_942570]
15.5567 -20.17 8.52797e-06 700 7 3 9 [+] picture button
zgc:110779 ENSDART00000055787 hypothetical protein LOC503740 [Source:RefSeq_peptide;Acc:NP_001013336]
14.3342 -19.84 8.99098e-06 793 5 1 5 [+] picture button
tomm40 ENSDART00000015302 translocase of outer mitochondrial membrane 40 homolog [Source:RefSeq_peptide;Acc:NP_955908]
14.8594 -26.17 9.37675e-06 1007 2 1 2 [+] picture button
txndc5 ENSDART00000002394 thioredoxin domain containing 5 [Source:RefSeq_peptide;Acc:NP_998181]
14.9726 -16.86 1.00003e-05 1907 2 2 2 [+] picture button
zgc:123333 ENSDART00000103551 hypothetical protein LOC560778 [Source:RefSeq_peptide;Acc:NP_001032465]
15.0561 -16.45 1.05188e-05 700 7 1 10 [+] picture button
zgc:56417 ENSDART00000102645 hypothetical protein LOC393258 [Source:RefSeq_peptide;Acc:NP_956582]
15.5297 -15.85 1.08365e-05 931 7 1 8 [+] picture button
npepl1 ENSDART00000024578 aminopeptidase-like 1 [Source:RefSeq_peptide;Acc:NP_001017688]
15.1945 -19.33 1.23744e-05 700 9 3 8 [+] picture button
zgc:113056 ENSDART00000009794 hypothetical protein LOC541541 [Source:RefSeq_peptide;Acc:NP_001014377]
15.453 -19.7 1.36136e-05 700 8 1 9 [+] picture button
GJA4 ENSDART00000103155 Gap junction alpha-4 protein (Connexin-37) (Cx37). [Source:Uniprot/SWISSPROT;Acc:P35212]
15.9934 -21.23 1.41857e-05 700 6 1 7 [+] picture button
SLC45A4 ENSDART00000085779 solute carrier family 45, member 4 [Source:RefSeq_peptide;Acc:NP_001073900]
17.285 -32.87 1.42878e-05 700 6 1 4 [+] picture button
SLC45A4 ENSDART00000103200 solute carrier family 45, member 4 [Source:RefSeq_peptide;Acc:NP_001073900]
17.285 -32.87 1.42878e-05 700 6 1 4 [+] picture button
SLC45A4 ENSDART00000085770 solute carrier family 45, member 4 [Source:RefSeq_peptide;Acc:NP_001073900]
17.285 -32.87 1.42878e-05 700 8 2 7 [+] picture button
rtcd1 ENSDART00000021666 RNA terminal phosphate cyclase domain 1 [Source:RefSeq_peptide;Acc:NP_955830]
14.5723 -15.53 1.6277e-05 747 7 3 7 [+] picture button
lbr ENSDART00000019145 lamin B receptor [Source:RefSeq_peptide;Acc:NP_001002720]
14.6454 -17.74 1.63838e-05 503 6 2 6 [+] picture button
si:dkey-181f18.3 ENSDART00000008840 si:dkey-181f18.3 [Source:RefSeq_peptide;Acc:NP_001025283]
14.9345 -14.98 1.76782e-05 700 7 2 8 [+] picture button
LOC559133 ENSDART00000066290 Urotensin II receptor (UR-II-R) (G-protein coupled receptor 14). [Source:Uniprot/SWISSPROT;Acc:Q9UKP6]Urotensin II receptor (UR-II-R) (G-protein coupled receptor 14). [Source:Uniprot/SWISSPROT;Acc:Q9UKP6] BY ORTHOLOGY TO:ENSGACT00000007048
15.2456 -21.02 1.8808e-05 700 7 2 7 [+] picture button
zgc:92308 ENSDART00000082454 Uncharacterized protein C1orf85 homolog precursor. [Source:Uniprot/SWISSPROT;Acc:Q66HW4]
16.8207 -19.8 1.88252e-05 382 7 1 9 [+] picture button
si:ch211-14a17.11 ENSDART00000076474 hypothetical protein LOC368892 [Source:RefSeq_peptide;Acc:NP_001007178]
14.3266 -18.92 2.068e-05 159 5 1 8 [+] picture button
LOC100005282 ENSDART00000020834 Protein pellino homolog 2 (Pellino-2). [Source:Uniprot/SWISSPROT;Acc:Q9HAT8]Protein pellino homolog 2 (Pellino-2). [Source:Uniprot/SWISSPROT;Acc:Q9HAT8] BY ORTHOLOGY TO:ENSGALT00000019806
14.3931 -13.25 2.41292e-05 700 6 1 12 [+] picture button
A2BGS3_DANRE ENSDART00000073721 Novel protein similar to vertebrate transmembrane protein 116 (TMEM116). [Source:Uniprot/SPTREMBL;Acc:A2BGS3]
15.3493 -14.2 2.65237e-05 700 7 1 8 [+] picture button
USP46 ENSDART00000066678 Ubiquitin carboxyl-terminal hydrolase 46 (EC 3.1.2.15) (Ubiquitin thioesterase 46) (Ubiquitin-specific-processing protease 46) (Deubiquitinating enzyme 46). [Source:Uniprot/SWISSPROT;Acc:P62068]
14.6088 -14.94 2.65376e-05 700 4 1 8 [+] picture button
zgc:77831 ENSDART00000035560 Transmembrane protein 38A. [Source:Uniprot/SWISSPROT;Acc:Q6P2T0]
14.9345 -16.15 2.69238e-05 700 3 1 4 [+] picture button
zgc:113841 ENSDART00000060809 hypothetical protein LOC553261 [Source:RefSeq_peptide;Acc:NP_001020094]
14.6677 -22.9 4.17585e-05 149 2 1 3 [+] picture button
zgc:101540 ENSDART00000103597 hypothetical protein LOC494096 [Source:RefSeq_peptide;Acc:NP_001008639]
15.6084 -17.19 4.78028e-05 700 5 1 5 [+] picture button
dffb ENSDART00000005989 DNA fragmentation factor, beta polypeptide (caspase-activated DNase) [Source:RefSeq_peptide;Acc:NP_919385]
14.6677 -11.63 5.2437e-05 283 10 3 17 [+] picture button
A2CER7_DANRE ENSDART00000051392 Novel protein similar to human spinster protein (SPIN1). [Source:Uniprot/SPTREMBL;Acc:A2CER7]
15.0003 -22.21 5.26933e-05 700 6 4 5 [+] picture button
LOC795522 ENSDART00000073865 Retinoblastoma-like protein 1 (107 kDa retinoblastoma-associated protein) (PRB1) (P107). [Source:Uniprot/SWISSPROT;Acc:P28749]Retinoblastoma-like protein 1 (107 kDa retinoblastoma-associated protein) (PRB1) (P107). [Source:Uniprot/SWISSPROT;Acc:P28749] BY ORTHOLOGY TO:ENSGALT00000002032
15.2456 -16.27 5.43188e-05 700 5 1 6 [+] picture button
zgc:123316 ENSDART00000101063 hypothetical protein LOC641475 [Source:RefSeq_peptide;Acc:NP_001032493]
14.5791 -19.52 5.77059e-05 700 9 1 8 [+] picture button
hsd3b7 ENSDART00000053684 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase [Source:RefSeq_peptide;Acc:NP_956103]
15.1177 -15.71 6.12027e-05 517 8 1 20 [+] picture button
zgc:158758 ENSDART00000100501 hypothetical protein LOC100009655 [Source:RefSeq_peptide;Acc:NP_001076493]
16.0653 -21.81 6.20543e-05 549 7 2 13 [+] picture button
LOC567726 ENSDART00000048623 Novel protein. [Source:Uniprot/SPTREMBL;Acc:Q5T5A3]Novel protein. [Source:Uniprot/SPTREMBL;Acc:Q5T5A3] BY ORTHOLOGY TO:ENSOANT00000007293
16.0231 -18.36 6.46624e-05 700 5 1 5 [+] picture button

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Download table: GFF TXT
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