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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-122

762 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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p4ha1 ENSDART00000001438 procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide [Source:RefSeq_peptide;Acc:NP_999856]
17.4522 -20.46 1.25518e-07 700 5 1 6 [+] picture button
GPR172A ENSDART00000045675 Porcine endogenous retrovirus A receptor 1 precursor (PERV-A receptor 1) (Protein GPR172A). [Source:Uniprot/SWISSPROT;Acc:Q9HAB3]
16.905 -20.28 2.57474e-07 700 5 1 7 [+] picture button
HIP1R (2 of 2) ENSDART00000085546 Huntingtin-interacting protein 1-related protein (Hip1-related) (Hip 12). [Source:Uniprot/SWISSPROT;Acc:O75146]
17.3198 -19.19 1e-06 700 6 1 3 [+] picture button
HIP1R (2 of 2) ENSDART00000085569 Huntingtin-interacting protein 1-related protein (Hip1-related) (Hip 12). [Source:Uniprot/SWISSPROT;Acc:O75146]
17.3198 -19.19 1e-06 700 6 1 3 [+] picture button
zgc:153789 ENSDART00000053220 Zgc:153789. [Source:Uniprot/SPTREMBL;Acc:Q08BG2]
18.5644 -23.93 1e-06 700 10 3 8 [+] picture button
HIP1R (2 of 2) ENSDART00000085556 Huntingtin-interacting protein 1-related protein (Hip1-related) (Hip 12). [Source:Uniprot/SWISSPROT;Acc:O75146]
17.3198 -19.19 1e-06 700 7 1 4 [+] picture button
LOC100007904 ENSDART00000004682 NOT ANNOTATED
17.9213 -17.32 1e-06 700 7 1 6 [+] picture button
gtf2b ENSDART00000099840 general transcription factor IIB [Source:RefSeq_peptide;Acc:NP_955991]
16.2827 -18.84 3.44651e-06 700 7 5 9 [+] picture button
TCF7 ENSDART00000056474 Transcription factor 7 (T-cell-specific transcription factor 1) (TCF- 1) (T-cell factor 1). [Source:Uniprot/SWISSPROT;Acc:P36402]
19.1058 -23.62 1.87492e-05 700 6 2 7 [+] picture button
zgc:114051 ENSDART00000058162 hypothetical protein LOC558711 [Source:RefSeq_peptide;Acc:NP_001020673]
17.4776 -18.11 1.94841e-05 525 10 3 16 [+] picture button
A2ATX7_DANRE ENSDART00000087001 Novel protein similar to vertebrate cyclin M2 (CNNM2). [Source:Uniprot/SPTREMBL;Acc:A2ATX7]
16.4901 -21.53 2.17368e-05 700 7 1 7 [+] picture button
snrpb2 ENSDART00000057601 Snrpb2 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6PBZ6]
17.1692 -14.89 2.4012e-05 254 4 4 14 [+] picture button
rpp30 ENSDART00000037601 ribonuclease P/MRP 30 subunit [Source:RefSeq_peptide;Acc:NP_001013497]
16.0322 -14.76 2.69657e-05 270 8 1 9 [+] picture button
zgc:92313 ENSDART00000059298 hypothetical protein LOC436869 [Source:RefSeq_peptide;Acc:NP_001002596]
17.173 -16.94 2.99971e-05 700 5 1 3 [+] picture button
zgc:123116 ENSDART00000078173 hypothetical protein LOC560501 [Source:RefSeq_peptide;Acc:NP_001038395]
17.1692 -19.48 3.87255e-05 204 7 2 7 [+] picture button
sh3glb1 ENSDART00000045933 SH3 domain GRB2-like protein B1 (EC 2.3.1.-) (Endophilin-B1) (Bax- interacting factor 1) (Bif-1). [Source:Uniprot/SWISSPROT;Acc:Q9Y371]SH3 domain GRB2-like protein B1 (EC 2.3.1.-) (Endophilin-B1) (Bax- interacting factor 1) (Bif-1). [Source:Uniprot/SWISSPROT;Acc:Q9Y371] BY ORTHOLOGY TO:ENST00000212369
17.5909 -17.66 4.51124e-05 305 11 5 17 [+] picture button
LOC560697 ENSDART00000089442 Kelch-like protein 5. [Source:Uniprot/SWISSPROT;Acc:Q96PQ7]Kelch-like protein 5. [Source:Uniprot/SWISSPROT;Acc:Q96PQ7] BY ORTHOLOGY TO:ENST00000359687
17.6388 -19.26 4.68744e-05 700 6 1 6 [+] picture button
snx14 ENSDART00000104725 sorting nexin 14 [Source:RefSeq_peptide;Acc:NP_001038258]
17.3524 -17.99 5.57511e-05 325 6 2 11 [+] picture button
slc39a13 ENSDART00000005261 solute carrier family 39 (zinc transporter), member 13 [Source:RefSeq_peptide;Acc:NP_001005306]
19.8981 -23.36 6.13268e-05 254 5 1 8 [+] picture button
A3QK24_DANRE ENSDART00000099609 Novel protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:A3QK24]
18.5644 -27.12 6.43108e-05 700 6 1 3 [+] picture button
pgrmc1 ENSDART00000076328 progesterone receptor membrane component 1 [Source:RefSeq_peptide;Acc:NP_001007393]
16.6439 -15.08 6.72587e-05 603 5 2 7 [+] picture button
paics ENSDART00000048164 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:RefSeq_peptide;Acc:NP_955831]
16.487 -14.86 7.04158e-05 153 4 2 7 [+] picture button
zgc:153956 ENSDART00000092931 hypothetical protein LOC557919 [Source:RefSeq_peptide;Acc:NP_001073434]
16.2731 -22.22 8.37701e-05 1190 5 2 5 [+] picture button
xrn2 ENSDART00000100246 5'-3' exoribonuclease 2 [Source:RefSeq_peptide;Acc:NP_001001944]
16.7032 -19.62 8.58414e-05 700 7 1 7 [+] picture button
apeh ENSDART00000098031 acylpeptide hydrolase [Source:RefSeq_peptide;Acc:NP_942570]
16.2827 -23.07 8.88504e-05 700 7 3 9 [+] picture button
INTS6 ENSDART00000009932 Integrator complex subunit 6 (Int6) (Protein deleted in cancer 1) (Protein DDX26) (DBI-1) (Deleted in cancer 1) (DICE1). [Source:Uniprot/SWISSPROT;Acc:Q9UL03]
15.9841 -21.45 0.000101798 1174 3 1 3 [+] picture button
ktn1 ENSDART00000041447 kinectin 1 [Source:RefSeq_peptide;Acc:NP_956375]
17.0147 -22.28 0.000122219 520 6 1 7 [+] picture button
ZMYM2 ENSDART00000015752 MYM-type zinc finger protein 2 (Zinc finger protein 198) (Fused in myeloproliferative disorders protein) (Rearranged in atypical myeloproliferative disorder protein). [Source:Uniprot/SWISSPROT;Acc:Q9UBW7]
16.406 -26.78 0.000183553 700 7 1 11 [+] picture button
zgc:123260 ENSDART00000053791 hypothetical protein LOC567403 [Source:RefSeq_peptide;Acc:NP_001032473]
16.487 -15.66 0.000186802 264 5 3 7 [+] picture button
NP_981965.1 ENSDART00000101690 bicaudal-C [Source:RefSeq_peptide;Acc:NP_981965]
18.1856 -23.63 0.000204944 423 6 1 7 [+] picture button
LOC794695 ENSDART00000087696 ProSAPiP2 protein [Source:RefSeq_peptide;Acc:NP_055541]ProSAPiP2 protein [Source:RefSeq_peptide;Acc:NP_055541] BY ORTHOLOGY TO:ENSCAFT00000026443
16.8013 -21.68 0.000214882 700 5 2 6 [+] picture button
l3mbtl2 ENSDART00000078494 l(3)mbt-like 2 [Source:RefSeq_peptide;Acc:NP_956326]
16.9418 -16.3 0.000233074 244 6 1 7 [+] picture button
zgc:92027 ENSDART00000004656 hypothetical protein LOC449543 [Source:RefSeq_peptide;Acc:NP_001005585]
18.1226 -20.62 0.000282646 387 6 2 13 [+] picture button
taf13 ENSDART00000104334 TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:RefSeq_peptide;Acc:NP_001004665]
17.9651 -16.21 0.000334172 330 3 1 2 [+] picture button
NUP54 ENSDART00000066692 Nucleoporin p54 (54 kDa nucleoporin). [Source:Uniprot/SWISSPROT;Acc:Q7Z3B4]
17.4915 -21.13 0.000335206 700 6 1 9 [+] picture button
zgc:112501 ENSDART00000054574 hypothetical protein LOC553733 [Source:RefSeq_peptide;Acc:NP_001018540]
16.7144 -18.41 0.000336097 122 4 1 6 [+] picture button
zgc:162560 ENSDART00000082093 Vacuolar protein sorting-associated protein 25. [Source:Uniprot/SWISSPROT;Acc:Q6NWF4]
17.9421 -24.11 0.000345319 700 3 1 3 [+] picture button
A2BHB5_DANRE ENSDART00000097709 Kaptin (Actin binding protein) (Fragment). [Source:Uniprot/SPTREMBL;Acc:A2BHB5]
16.179 -23.26 0.000365201 700 7 2 8 [+] picture button
AAK1 ENSDART00000008058 AP2-associated protein kinase 1 (EC 2.7.11.1) (Adaptor-associated kinase 1). [Source:Uniprot/SWISSPROT;Acc:Q2M2I8]
17.4235 -17.84 0.000376771 700 10 1 8 [+] picture button
si:dkey-9a20.6 ENSDART00000052552 hypothetical protein LOC563056 [Source:RefSeq_peptide;Acc:NP_001038471]
16.8199 -21.23 0.000390641 797 3 1 4 [+] picture button
nudcd1 ENSDART00000052503 NudC domain containing 1 [Source:RefSeq_peptide;Acc:NP_001018463]
16.1459 -17.86 0.000403898 245 8 2 13 [+] picture button
copz1 ENSDART00000011201 coatomer protein complex, subunit zeta 1 [Source:RefSeq_peptide;Acc:NP_571583]
16.1805 -17.37 0.00040969 410 7 2 18 [+] picture button
LOC100003406 ENSDART00000012335 MHC class II regulatory factor RFX1 (RFX) (Enhancer factor C) (EF-C). [Source:Uniprot/SWISSPROT;Acc:P22670]MHC class II regulatory factor RFX1 (RFX) (Enhancer factor C) (EF-C). [Source:Uniprot/SWISSPROT;Acc:P22670] BY ORTHOLOGY TO:ENSCAFT00000026160
17.3966 -18.28 0.000409886 81 2 3 3 [+] picture button
zgc:100974 ENSDART00000016995 hypothetical protein LOC445219 [Source:RefSeq_peptide;Acc:NP_001003613]
16.1459 -12.91 0.000438818 179 5 2 10 [+] picture button
zgc:114076 ENSDART00000082222 hypothetical protein LOC619252 [Source:RefSeq_peptide;Acc:NP_001028906]
16.1032 -20.01 0.000458311 608 7 1 11 [+] picture button
zgc:76871 ENSDART00000082122 UPF0027 protein C22orf28 homolog. [Source:Uniprot/SWISSPROT;Acc:Q6NZS4]
16.487 -13.63 0.000459625 132 4 1 8 [+] picture button
si:ch211-106n13.1 ENSDART00000029412 Novel protein similar to vertebrate NEDD4-like ubiquitin-protein ligase 1 (NEDL1) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1LYI3]
16.5939 -16.32 0.000468783 700 2 1 2 [+] picture button
zgc:92356 ENSDART00000025292 hypothetical protein LOC436717 [Source:RefSeq_peptide;Acc:NP_001002444]
17.3723 -18.35 0.000481181 429 7 2 9 [+] picture button
LOC793238 ENSDART00000097561 Kv channel-interacting protein 4 (KChIP4) (A-type potassium channel modulatory protein 4) (Potassium channel-interacting protein 4) (Calsenilin-like protein). [Source:Uniprot/SWISSPROT;Acc:Q6PIL6]Kv channel-interacting protein 4 (KChIP4) (A-type potassium channel modulatory protein 4) (Potassium channel-interacting protein 4) (Calsenilin-like protein). [Source:Uniprot/SWISSPROT;Acc:Q6PIL6] BY ORTHOLOGY TO:ENST00000382152
16.5939 -24.87 0.000499293 700 5 1 4 [+] picture button
LOC570106 ENSDART00000085284 phosphofructokinase, liver, B-type [Source:MarkerSymbol;Acc:MGI:97547]phosphofructokinase, liver, B-type [Source:MarkerSymbol;Acc:MGI:97547] BY ORTHOLOGY TO:ENSMUST00000020522
16.179 -22.1 0.000500294 700 6 1 6 [+] picture button

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Download table: GFF TXT
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