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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-10c

1013 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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hoxa3a ENSDART00000052633 Homeobox protein Hox-A3a. [Source:Uniprot/SWISSPROT;Acc:Q8AWZ2]
15.7572 -15.86 0.00000000909035 719 11 4 14 [+] picture button
LOC100003903 ENSDART00000058877 Ras-related protein Rap-2a precursor (RbBP-30). [Source:Uniprot/SWISSPROT;Acc:P10114]Ras-related protein Rap-2a precursor (RbBP-30). [Source:Uniprot/SWISSPROT;Acc:P10114] BY ORTHOLOGY TO:ENST00000245304
14.8308 -17.03 0.0000000345248 700 10 1 8 [+] picture button
dazap1 ENSDART00000104362 Dazap1 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q29R83]
15.7442 -15.05 0.000000281035 700 10 3 10 [+] picture button
LOC798196 ENSDART00000092836 RING finger protein 122. [Source:Uniprot/SWISSPROT;Acc:Q9H9V4]RING finger protein 122. [Source:Uniprot/SWISSPROT;Acc:Q9H9V4] BY ORTHOLOGY TO:ENSMODT00000014100
15.0743 -17.16 0.000000318784 700 4 1 4 [+] picture button
zgc:153617 ENSDART00000092729 hypothetical protein LOC751644 [Source:RefSeq_peptide;Acc:NP_001038828]
15.2086 -17.44 0.000000445552 700 6 4 10 [+] picture button
hoxd10a ENSDART00000080608 Homeobox protein Hox-D10a (Hox-D10) (Hox-C10). [Source:Uniprot/SWISSPROT;Acc:Q90469]
16.1337 -16.13 0.00000072834 700 4 8 4 [+] picture button
zgc:113293 ENSDART00000055822 hypothetical protein LOC550593 [Source:RefSeq_peptide;Acc:NP_001017894]
16.179 -19.31 0.000001 700 19 1 7 [+] picture button
A2BG52_DANRE ENSDART00000100817 Novel protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:A2BG52]
16.6976 -22.18 0.000001 700 21 1 3 [+] picture button
hoxb1a ENSDART00000011369 Homeobox protein Hox-B1a (Hox-B1). [Source:Uniprot/SWISSPROT;Acc:O42366]
17.3198 -20.85 0.000001 700 7 1 4 [+] picture button
zgc:55702 ENSDART00000030995 hypothetical protein LOC393143 [Source:RefSeq_peptide;Acc:NP_956468]
15.176 -24.84 0.0000011773 685 10 4 12 [+] picture button
dvl2 ENSDART00000012450 dishevelled 2, dsh homolog [Source:RefSeq_peptide;Acc:NP_997813]
16.1459 -15.92 0.00000230842 278 9 5 15 [+] picture button
zgc:112248 ENSDART00000081025 hypothetical protein LOC573990 [Source:RefSeq_peptide;Acc:NP_001020340]
15.2896 -17.37 0.00000240702 354 6 2 8 [+] picture button
A2BH14_DANRE ENSDART00000092613 Novel protein similar to vertebrate glutamate receptor, ionotropic, N- methyl D-aspartate 2B (GRIN2B). [Source:Uniprot/SPTREMBL;Acc:A2BH14]
15.8336 -14.04 0.00000636988 700 9 5 12 [+] picture button
MARK2 ENSDART00000005329 Serine/threonine-protein kinase MARK2 (EC 2.7.11.1) (MAP/microtubule affinity-regulating kinase 2) (ELKL motif kinase) (EMK1) (PAR1 homolog). [Source:Uniprot/SWISSPROT;Acc:Q7KZI7]
16.3219 -18.94 0.00000669419 700 3 4 3 [+] picture button
LOC557933 ENSDART00000101521 Homolog of Oncorhynchus mykiss "G protein-coupled receptor LPSenhR-1. [Source:Uniprot/SPTREMBL;Acc:Q8JJ23]"Homolog of Oncorhynchus mykiss "G protein-coupled receptor LPSenhR-1. [Source:Uniprot/SPTREMBL;Acc:Q8JJ23]" BY ORTHOLOGY TO:SINFRUT00000181260
15.7005 -16.42 0.0000077041 700 8 1 8 [+] picture button
cnot8 ENSDART00000018350 CCR4-NOT transcription complex, subunit 8 [Source:RefSeq_peptide;Acc:NP_998644]
14.8418 -22.5 0.00000876194 717 4 1 6 [+] picture button
zgc:110677 ENSDART00000002741 hypothetical protein LOC550570 [Source:RefSeq_peptide;Acc:NP_001017872]
16.0322 -15.18 0.000017007 193 7 3 14 [+] picture button
numbl ENSDART00000039454 numb homolog [Source:RefSeq_peptide;Acc:NP_001012375]
16.0557 -17.06 0.0000209246 458 9 2 10 [+] picture button
ica ENSDART00000080408 islet cell autoantigen [Source:RefSeq_peptide;Acc:NP_963881]
15.294 -16.84 0.0000309942 636 6 1 8 [+] picture button
zgc:136884 ENSDART00000087977 hypothetical protein LOC735248 [Source:RefSeq_peptide;Acc:NP_001038798]
15.3308 -22.51 0.0000333859 1166 3 1 4 [+] picture button
zgc:154176 ENSDART00000105878 hypothetical protein LOC768160 [Source:RefSeq_peptide;Acc:NP_001070771]
18.486 -24.1 0.0000348173 417 7 1 12 [+] picture button
rag1 ENSDART00000073913 V(D)J recombination-activating protein 1 (RAG-1). [Source:Uniprot/SWISSPROT;Acc:O13033]
14.9523 -15.86 0.0000449179 700 7 1 7 [+] picture button
LOC558263 ENSDART00000088817 IQ and ubiquitin-like domain-containing protein. [Source:Uniprot/SWISSPROT;Acc:Q8NA54]IQ and ubiquitin-like domain-containing protein. [Source:Uniprot/SWISSPROT;Acc:Q8NA54] BY ORTHOLOGY TO:ENSOANT00000007641
17.7347 -26.17 0.0000458894 700 6 2 7 [+] picture button
LOC559804 ENSDART00000035713 NOT ANNOTATED
16.6388 -19.33 0.0000530302 700 7 1 7 [+] picture button
LOC568309 ENSDART00000058772 Breast cancer anti-estrogen resistance protein 1 (CRK-associated substrate) (p130cas). [Source:Uniprot/SWISSPROT;Acc:P56945]Breast cancer anti-estrogen resistance protein 1 (CRK-associated substrate) (p130cas). [Source:Uniprot/SWISSPROT;Acc:P56945] BY ORTHOLOGY TO:ENST00000162330
15.8485 -21.03 0.0000617168 700 5 1 6 [+] picture button
LOC572187 ENSDART00000052289 Dedicator of cytokinesis protein 1 (180 kDa protein downstream of CRK) (DOCK180). [Source:Uniprot/SWISSPROT;Acc:Q14185]Dedicator of cytokinesis protein 1 (180 kDa protein downstream of CRK) (DOCK180). [Source:Uniprot/SWISSPROT;Acc:Q14185] BY ORTHOLOGY TO:SINFRUT00000131862
15.1771 -15.29 0.0000621551 700 9 1 8 [+] picture button
smndc1 ENSDART00000031547 survival motor neuron domain containing 1 [Source:RefSeq_peptide;Acc:NP_997766]
16.5199 -20.23 0.0000668823 562 7 1 10 [+] picture button
si:dkey-217k21.3 ENSDART00000021953 hypothetical protein LOC567886 [Source:RefSeq_peptide;Acc:NP_001038609]
16.0753 -15.23 0.0000731074 700 8 1 7 [+] picture button
DMXL1 ENSDART00000092643 Protein DmX-like 1 (X-like 1 protein). [Source:Uniprot/SWISSPROT;Acc:Q9Y485]
14.8081 -17 0.000073308 700 8 1 8 [+] picture button
igf1ra ENSDART00000010189 insulin-like growth factor 1a receptor [Source:RefSeq_peptide;Acc:NP_694500]
15.4608 -15.43 0.0000753419 700 3 1 3 [+] picture button
zgc:162327 ENSDART00000101958 hypothetical protein LOC100037326 [Source:RefSeq_peptide;Acc:NP_001082951]
17.1692 -20.47 0.0000753446 159 2 1 6 [+] picture button
LOC100002836 ENSDART00000092959 T-STAR (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6J4Q6]T-STAR (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6J4Q6] BY ORTHOLOGY TO:ENSMMUT00000031295
15.453 -26.03 0.0000757238 700 6 1 5 [+] picture button
PGAP1_HUMAN ENSDART00000090346 GPI inositol-deacylase (EC 3.1.-.-) (hPGAP1). [Source:Uniprot/SWISSPROT;Acc:Q75T13]
15.2456 -15.55 0.0000760375 700 10 1 16 [+] picture button
LOC561043 ENSDART00000091894 mannosidase, alpha, class 2A, member 2 [Source:RefSeq_peptide;Acc:NP_006113]mannosidase, alpha, class 2A, member 2 [Source:RefSeq_peptide;Acc:NP_006113] BY ORTHOLOGY TO:ENSMMUT00000046948
14.8376 -25.14 0.0000804258 700 8 1 11 [+] picture button
Q6AI01_HUMAN ENSDART00000085404 NOT ANNOTATED
15.8892 -21.39 0.000084937 700 7 2 9 [+] picture button
zgc:158309 ENSDART00000102202 hypothetical protein LOC559124 [Source:RefSeq_peptide;Acc:NP_001073447]
15.4356 -15.9 0.0000852065 412 7 2 8 [+] picture button
LOC562999 ENSDART00000086984 Probable E3 ubiquitin-protein ligase HECTD2 (HECT domain-containing protein 2). [Source:Uniprot/SWISSPROT;Acc:Q5U5R9]Probable E3 ubiquitin-protein ligase HECTD2 (HECT domain-containing protein 2). [Source:Uniprot/SWISSPROT;Acc:Q5U5R9] BY ORTHOLOGY TO:ENSGALT00000002758
14.9568 -12.2 0.0000852785 700 3 1 4 [+] picture button
CENTD1 ENSDART00000043256 Centaurin-delta 1 (Cnt-d1) (Arf-GAP, Rho-GAP, ankyrin repeat and pleckstrin homology domain-containing protein 2) (PARX protein). [Source:Uniprot/SWISSPROT;Acc:Q8WZ64]
15.6605 -24.52 0.0000892694 700 3 1 3 [+] picture button
zgc:110020 ENSDART00000081819 endonuclease G-like [Source:RefSeq_peptide;Acc:NP_001019385]
15.8679 -22.69 0.000094237 700 8 1 9 [+] picture button
LOC569270 ENSDART00000103489 Centromere protein S (CENP-S) (Apoptosis-inducing TAF9-like domain- containing protein 1). [Source:Uniprot/SWISSPROT;Acc:Q8N2Z9]Centromere protein S (CENP-S) (Apoptosis-inducing TAF9-like domain- containing protein 1). [Source:Uniprot/SWISSPROT;Acc:Q8N2Z9] BY ORTHOLOGY TO:SINFRUT00000147277
14.9171 -20.24 0.0000962607 700 6 1 5 [+] picture button
bdnf ENSDART00000052508 brain-derived neurotrophic factor [Source:RefSeq_peptide;Acc:NP_571670]
16.487 -13.71 0.0000982553 221 5 9 6 [+] picture button
zgc:63493 ENSDART00000050217 hypothetical protein LOC393569 [Source:RefSeq_peptide;Acc:NP_956891]
16.2939 -21.45 0.0000991133 700 10 1 7 [+] picture button
zgc:66327 ENSDART00000040240 hypothetical protein LOC393636 [Source:RefSeq_peptide;Acc:NP_956957]
14.965 -20.97 0.000110173 700 6 2 8 [+] picture button
stc2 ENSDART00000079215 stanniocalcin 2 [Source:RefSeq_peptide;Acc:NP_001014827]
15.2205 -18.89 0.000112254 627 4 4 4 [+] picture button
si:dkey-24b15.1 ENSDART00000085236 hypothetical protein LOC791134 [Source:RefSeq_peptide;Acc:NP_001074085]
15.0812 -24.06 0.000112338 700 4 1 5 [+] picture button
zgc:153341 ENSDART00000084503 hypothetical protein LOC768135 [Source:RefSeq_peptide;Acc:NP_001070749]
15.0088 -14.83 0.000122753 700 6 2 8 [+] picture button
LOC558865 ENSDART00000092727 Bromodomain and WD repeat domain-containing protein 2 (WD repeat protein 11). [Source:Uniprot/SWISSPROT;Acc:Q9BZH6]Bromodomain and WD repeat domain-containing protein 2 (WD repeat protein 11). [Source:Uniprot/SWISSPROT;Acc:Q9BZH6] BY ORTHOLOGY TO:ENSGALT00000015447
16.179 -17.8 0.00012518 700 6 1 7 [+] picture button
LOC797408 ENSDART00000026359 Homolog of Gallus gallus "Myosin-binding protein H (MyBP-H) (H-protein) (86 kDa protein). [Source:Uniprot/SWISSPROT;Acc:Q05623]"Homolog of Gallus gallus "Myosin-binding protein H (MyBP-H) (H-protein) (86 kDa protein). [Source:Uniprot/SWISSPROT;Acc:Q05623]" BY ORTHOLOGY TO:SINFRUT00000136449
16.4109 -19.01 0.000126284 700 5 1 4 [+] picture button
zgc:92346 ENSDART00000005775 hypothetical protein LOC436721 [Source:RefSeq_peptide;Acc:NP_001002448]
15.7017 -15.13 0.000143658 545 8 1 12 [+] picture button
A1L2C9_DANRE ENSDART00000048733 Hypothetical protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:A1L2C9]
16.3243 -20.42 0.000144219 700 8 1 7 [+] picture button

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Download table: GFF TXT
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