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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-100

786 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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gnmt ENSDART00000024379 glycine N-methyltransferase [Source:RefSeq_peptide;Acc:NP_997981]
14.5557 -13.19 0.000000186278 321 6 2 11 [+] picture button
hs3st2 ENSDART00000083040 heparan sulfate (glucosamine) 3-O-sulfotransferase 2 [Source:RefSeq_peptide;Acc:NP_001074077]
15.16 -16.47 0.000000375389 700 4 2 5 [+] picture button
zgc:63668 ENSDART00000043565 hypothetical protein LOC393415 [Source:RefSeq_peptide;Acc:NP_956737]
14.9681 -14.21 0.00000553385 700 8 2 9 [+] picture button
fzd8a ENSDART00000066835 frizzled homolog 8a [Source:RefSeq_peptide;Acc:NP_571629]
16.451 -14.66 0.00000832041 700 9 2 10 [+] picture button
LOC100000320 ENSDART00000074225 Guanine nucleotide-binding protein G(I)/G(S)/G(O) gamma-4 subunit precursor. [Source:Uniprot/SWISSPROT;Acc:P50150]Guanine nucleotide-binding protein G(I)/G(S)/G(O) gamma-4 subunit precursor. [Source:Uniprot/SWISSPROT;Acc:P50150] BY ORTHOLOGY TO:ENSGACT00000005614
14.3969 -12.9 0.00000837005 700 2 1 2 [+] picture button
hsp90b1 ENSDART00000004879 tumor rejection antigen (gp96) 1 [Source:RefSeq_peptide;Acc:NP_937853]
15.1225 -10.98 0.0000143295 255 6 6 13 [+] picture button
LOC559864 ENSDART00000087436 Carbohydrate sulfotransferase 4 (EC 2.8.2.-) (N-acetylglucosamine 6-O- sulfotransferase 2) (GlcNAc6ST-2) (High endothelial cells N- acetylglucosamine 6-O-sulfotransferase) (HEC-GlcNAc6ST) (L-selectin ligand sulfotransferase) (LSST) (Galactose/N-acetylgluc [Source:Uniprot/SWISSPROT;Acc:Q8NCG5]Carbohydrate sulfotransferase 4 (EC 2.8.2.-) (N-acetylglucosamine 6-O- sulfotransferase 2) (GlcNAc6ST-2) (High endothelial cells N- acetylglucosamine 6-O-sulfotransferase) (HEC-GlcNAc6ST) (L-selectin ligand sulfotransferase) (LSST) (Galactose/N-acetylgluc [Source:Uniprot/SWISSPROT;Acc:Q8NCG5] BY ORTHOLOGY TO:ENSGALT00000001323
14.4616 -14.25 0.0000148381 700 7 1 7 [+] picture button
A2BFP5_DANRE ENSDART00000084917 Novel protein to vertebrate solute carrier family 12 (Potassium/chloride transporters), member 9 (SLC12A9). [Source:Uniprot/SPTREMBL;Acc:A2BFP5]
15.5567 -18.64 0.0000285789 700 5 1 6 [+] picture button
sox9a ENSDART00000005676 SRY-box containing gene 9a [Source:RefSeq_peptide;Acc:NP_571718]
15.9185 -14.35 0.0000285924 235 7 2 15 [+] picture button
KIAA1432 ENSDART00000082377 KIAA1432 (KIAA1432), mRNA [Source:RefSeq_dna;Acc:NM_020829]
17.3198 -31.84 0.0000409592 700 7 1 8 [+] picture button
LOC568515 ENSDART00000005072 Src-like-adapter 2 (Src-like adapter protein 2) (SLAP-2) (Modulator of antigen receptor signaling) (MARS). [Source:Uniprot/SWISSPROT;Acc:Q9H6Q3]Src-like-adapter 2 (Src-like adapter protein 2) (SLAP-2) (Modulator of antigen receptor signaling) (MARS). [Source:Uniprot/SWISSPROT;Acc:Q9H6Q3] BY ORTHOLOGY TO:ENSORLT00000017339
14.2085 -16.26 0.0000465972 700 5 2 6 [+] picture button
zgc:111979 ENSDART00000065206 hypothetical protein LOC553797 [Source:RefSeq_peptide;Acc:NP_001018595]
16.8146 -15.59 0.0000538067 516 4 1 5 [+] picture button
C17orf56 ENSDART00000105533 Uncharacterized protein C17orf56. [Source:Uniprot/SPTREMBL;Acc:Q96N21]
15.6791 -18.75 0.0000702809 700 5 1 7 [+] picture button
NP_056002.1 ENSDART00000098272 RIKEN cDNA 2310045A20 gene [Source:MarkerSymbol;Acc:MGI:1916941]RIKEN cDNA 2310045A20 gene [Source:MarkerSymbol;Acc:MGI:1916941] BY ORTHOLOGY TO:ENSMUST00000031090
17.133 -23.52 0.0000716333 700 8 1 7 [+] picture button
zgc:56608 ENSDART00000058546 hypothetical protein LOC394069 [Source:RefSeq_peptide;Acc:NP_957388]
14.4328 -16.12 0.0000737674 458 10 1 17 [+] picture button
rx3 ENSDART00000074833 Retinal homeobox protein Rx3. [Source:Uniprot/SWISSPROT;Acc:O42358]
14.1421 -12.94 0.0000868778 416 7 2 14 [+] picture button
si:ch211-234g24.3 ENSDART00000086530 Novel protein similar to vertebrate SH3KBP1 binding protein 1 (SHKBP1) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1L992]
14.4862 -18.83 0.0000977708 700 8 2 8 [+] picture button
A2BHF3_DANRE ENSDART00000047719 Novel protein similar to vertebrate calcium channel, voltage- dependent, L type, alpha 1B subunit (CACNA1B). [Source:Uniprot/SPTREMBL;Acc:A2BHF3]
14.4159 -23.67 0.000102413 700 9 3 13 [+] picture button
ENSDART00000100112 NOT ANNOTATED
15.4857 -20.42 0.000119025 700 8 1 6 [+] picture button
ENSDART00000103585 NOT ANNOTATED
15.4857 -20.42 0.000119025 700 8 1 6 [+] picture button
ENSDART00000075894 NOT ANNOTATED
15.4857 -20.42 0.000119025 700 8 1 6 [+] picture button
ENSDART00000102545 NOT ANNOTATED
15.4857 -20.42 0.000119025 700 8 1 6 [+] picture button
ENSDART00000062821 NOT ANNOTATED
15.4857 -20.42 0.000119025 700 8 1 7 [+] picture button
LOC556075 ENSDART00000079638 CG10795-PA [Source:RefSeq_peptide;Acc:NP_611583]CG10795-PA [Source:RefSeq_peptide;Acc:NP_611583] BY ORTHOLOGY TO:CG10795-RA
16.905 -20.73 0.000121345 700 9 1 12 [+] picture button
LOC556983 ENSDART00000092524 RAS p21 protein activator 3 [Source:MarkerSymbol;Acc:MGI:1197013]RAS p21 protein activator 3 [Source:MarkerSymbol;Acc:MGI:1197013] BY ORTHOLOGY TO:ENSMUST00000033833
14.2511 -15.5 0.000134229 700 8 1 8 [+] picture button
zgc:92194 ENSDART00000018270 hypothetical protein LOC447849 [Source:RefSeq_peptide;Acc:NP_001004588]
16.487 -17.87 0.000139752 263 4 1 8 [+] picture button
cdx4 ENSDART00000052709 caudal type homeo box transcription factor 4 [Source:RefSeq_peptide;Acc:NP_571184]
15.1177 -15.39 0.00015533 504 11 3 14 [+] picture button
rae1 ENSDART00000020333 RAE1 RNA export 1 homolog [Source:RefSeq_peptide;Acc:NP_957292]
14.6117 -13.74 0.000228006 381 12 2 15 [+] picture button
ccng1 ENSDART00000033596 cyclin G1 [Source:RefSeq_peptide;Acc:NP_955775]
15.1718 -17.12 0.000249503 869 7 1 6 [+] picture button
tspan15 ENSDART00000057641 tetraspanin 15 [Source:RefSeq_peptide;Acc:NP_001017773]
14.6088 -13.14 0.000250178 700 11 5 13 [+] picture button
Q1ECV0_DANRE ENSDART00000017596 Hypothetical protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1ECV0]
15.8361 -17.6 0.000252558 700 6 1 7 [+] picture button
zgc:110188 ENSDART00000061409 hypothetical protein LOC550529 [Source:RefSeq_peptide;Acc:NP_001017831]
15.2365 -23.67 0.000270869 390 5 2 8 [+] picture button
ENSDART00000090883 Homolog of Homo sapiens "Splice Isoform 1 of Transmembrane glycoprotein NMB precursor [Source:IPI;Acc:IPI00470529]"Homolog of Homo sapiens "Splice Isoform 1 of Transmembrane glycoprotein NMB precursor [Source:IPI;Acc:IPI00470529]" BY ORTHOLOGY TO:SINFRUT00000153461
16.0969 -20.63 0.000273317 700 5 1 7 [+] picture button
im:7148034 ENSDART00000009343 Im:7148034 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q58EN1]
14.4393 -15.13 0.000288499 700 9 2 10 [+] picture button
LOC798703 ENSDART00000060098 Gem-associated protein 7 (Gemin-7) (SIP3). [Source:Uniprot/SWISSPROT;Acc:Q9H840]Gem-associated protein 7 (Gemin-7) (SIP3). [Source:Uniprot/SWISSPROT;Acc:Q9H840] BY ORTHOLOGY TO:ENSMMUT00000032273
14.4403 -16.05 0.000291125 143 5 2 8 [+] picture button
LOC557046 ENSDART00000024499 Sulfate transporter (Diastrophic dysplasia protein homolog) (Solute carrier family 26 member 2). [Source:Uniprot/SWISSPROT;Acc:O70531]Sulfate transporter (Diastrophic dysplasia protein homolog) (Solute carrier family 26 member 2). [Source:Uniprot/SWISSPROT;Acc:O70531] BY ORTHOLOGY TO:ENSRNOT00000024374
15.868 -19.35 0.000298641 700 7 1 8 [+] picture button
LOC568361 ENSDART00000079232 LR11 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9R0N2]LR11 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9R0N2] BY ORTHOLOGY TO:ENSRNOT00000059974
15.1498 -15.37 0.000332219 700 7 1 10 [+] picture button
cad ENSDART00000061361 carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase [Source:RefSeq_peptide;Acc:NP_001009884]
15.1595 -20.85 0.000334512 700 8 4 12 [+] picture button
utp15 ENSDART00000021370 U3 small nucleolar RNA-associated protein 15 homolog. [Source:Uniprot/SWISSPROT;Acc:Q7ZW33]
16.8281 -24.55 0.000338607 210 8 2 12 [+] picture button
ndpkz3 ENSDART00000080666 nucleoside diphosphate kinase-Z3 [Source:RefSeq_peptide;Acc:NP_571003]
14.3693 -15.22 0.00035166 521 7 3 9 [+] picture button
sc5d ENSDART00000065600 sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog [Source:RefSeq_peptide;Acc:NP_001004630]
14.554 -13.44 0.000355622 283 5 1 6 [+] picture button
zgc:110044 ENSDART00000054707 zgc:110044 (zgc:110044), mRNA [Source:RefSeq_dna;Acc:NM_001020560]
15.1419 -17.83 0.000391553 700 8 2 9 [+] picture button
phf16 ENSDART00000023163 Protein Jade-3 (PHD finger protein 16). [Source:Uniprot/SWISSPROT;Acc:Q7ZVP1]
14.5844 -13.58 0.000408621 451 11 2 16 [+] picture button
gipc2 ENSDART00000003465 GIPC PDZ domain containing family, member 2 [Source:RefSeq_peptide;Acc:NP_957224]
16.2066 -22.12 0.000410516 597 7 1 10 [+] picture button
LOC558321 ENSDART00000091370 Mitogen-activated protein kinase kinase kinase 2 (EC 2.7.11.25) (MAPK/ERK kinase kinase 2) (MEK kinase 2) (MEKK 2). [Source:Uniprot/SWISSPROT;Acc:Q9Y2U5]Mitogen-activated protein kinase kinase kinase 2 (EC 2.7.11.25) (MAPK/ERK kinase kinase 2) (MEK kinase 2) (MEKK 2). [Source:Uniprot/SWISSPROT;Acc:Q9Y2U5] BY ORTHOLOGY TO:SINFRUT00000141140
14.455 -21.16 0.000427239 700 10 4 16 [+] picture button
dlgap1 ENSDART00000008842 Disks large-associated protein 1 (DAP-1) (Guanylate kinase-associated protein). [Source:Uniprot/SWISSPROT;Acc:Q7ZYZ6]
15.3909 -13.58 0.000445582 700 6 1 10 [+] picture button
zgc:113092 ENSDART00000006093 hypothetical protein LOC503533 [Source:RefSeq_peptide;Acc:NP_001012515]
14.3291 -17.34 0.000450969 1188 4 1 5 [+] picture button
Q08BD0_DANRE ENSDART00000085046 Hypothetical protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q08BD0]
16.0322 -12.9 0.000451414 160 4 2 8 [+] picture button
zgc:153977 ENSDART00000082927 hypothetical protein LOC768185 [Source:RefSeq_peptide;Acc:NP_001070796]
14.4277 -15.37 0.000451583 670 6 1 8 [+] picture button
LOC568246 ENSDART00000092217 Tetratricopeptide repeat protein 13 (TPR repeat protein 13). [Source:Uniprot/SWISSPROT;Acc:Q8NBP0]Tetratricopeptide repeat protein 13 (TPR repeat protein 13). [Source:Uniprot/SWISSPROT;Acc:Q8NBP0] BY ORTHOLOGY TO:ENSOANT00000021674
15.5287 -17.11 0.000451705 700 7 1 7 [+] picture button

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Download table: GFF TXT
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